1,846 results on '"H Miller"'
Search Results
2. Non-Targeted Analysis Using Gas Chromatography-Mass Spectrometry for Evaluation of Chemical Composition of E-Vapor Products
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Niti H. Shah, Michael R. Noe, Kimberly A. Agnew-Heard, Yezdi B. Pithawalla, William P. Gardner, Saibal Chakraborty, Nicholas McCutcheon, Hannah Grisevich, Thomas J. Hurst, Michael J. Morton, Matt S. Melvin, and John H. Miller IV
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non-targeted analysis ,electronic vapor products ,ENDS ,aerosol ,e-liquids ,semi-quantitative analysis ,Chemistry ,QD1-999 - Abstract
The Premarket Tobacco Product Applications (PMTA) guidance issued by the Food and Drug Administration for electronic nicotine delivery systems (ENDSs) recommends that in addition to reporting harmful and potentially harmful constituents (HPHCs), manufacturers should evaluate these products for other chemicals that could form during use and over time. Although e-vapor product aerosols are considerably less complex than mainstream smoke from cigarettes and heated tobacco product (HTP) aerosols, there are challenges with performing a comprehensive chemical characterization. Some of these challenges include the complexity of the e-liquid chemical compositions, the variety of flavors used, and the aerosol collection efficiency of volatile and semi-volatile compounds generated from aerosols. In this study, a non-targeted analysis method was developed using gas chromatography-mass spectrometry (GC-MS) that allows evaluation of volatile and semi-volatile compounds in e-liquids and aerosols of e-vapor products. The method employed an automated data analysis workflow using Agilent MassHunter Unknowns Analysis software for mass spectral deconvolution, peak detection, and library searching and reporting. The automated process ensured data integrity and consistency of compound identification with >99% of known compounds being identified using an in-house custom mass spectral library. The custom library was created to aid in compound identifications and includes over 1,100 unique mass spectral entries, of which 600 have been confirmed from reference standard comparisons. The method validation included accuracy, precision, repeatability, limit of detection (LOD), and selectivity. The validation also demonstrated that this semi-quantitative method provides estimated concentrations with an accuracy ranging between 0.5- and 2.0-fold as compared to the actual values. The LOD threshold of 0.7 ppm was established based on instrument sensitivity and accuracy of the compounds identified. To demonstrate the application of this method, we share results from the comprehensive chemical profile of e-liquids and aerosols collected from a marketed e-vapor product. Applying the data processing workflow developed here, 46 compounds were detected in the e-liquid formulation and 55 compounds in the aerosol sample. More than 50% of compounds reported have been confirmed with reference standards. The profiling approach described in this publication is applicable to evaluating volatile and semi-volatile compounds in e-vapor products.
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- 2021
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3. A Non-Hazardous Deparaffinization Protocol Enables Quantitative Proteomics of Core Needle Biopsy-Sized Formalin-Fixed and Paraffin-Embedded (FFPE) Tissue Specimens
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Georgia Mitsa, Qianyu Guo, Christophe Goncalves, Samuel E. J. Preston, Vincent Lacasse, Adriana Aguilar-Mahecha, Naciba Benlimame, Mark Basik, Alan Spatz, Gerald Batist, Wilson H. Miller, Sonia V. del Rincon, René P. Zahedi, and Christoph H. Borchers
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clinical proteomics ,tumor tissues ,FFPE ,quantitative proteomics ,core needle biopsy ,cancer research ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Most human tumor tissues that are obtained for pathology and diagnostic purposes are formalin-fixed and paraffin-embedded (FFPE). To perform quantitative proteomics of FFPE samples, paraffin has to be removed and formalin-induced crosslinks have to be reversed prior to proteolytic digestion. A central component of almost all deparaffinization protocols is xylene, a toxic and highly flammable solvent that has been reported to negatively affect protein extraction and quantitative proteome analysis. Here, we present a ‘green’ xylene-free protocol for accelerated sample preparation of FFPE tissues based on paraffin-removal with hot water. Combined with tissue homogenization using disposable micropestles and a modified protein aggregation capture (PAC) digestion protocol, our workflow enables streamlined and reproducible quantitative proteomic profiling of FFPE tissue. Label-free quantitation of FFPE cores from human ductal breast carcinoma in situ (DCIS) xenografts with a volume of only 0.79 mm3 showed a high correlation between replicates (r2 = 0.992) with a median %CV of 16.9%. Importantly, this small volume is already compatible with tissue micro array (TMA) cores and core needle biopsies, while our results and its ease-of-use indicate that further downsizing is feasible. Finally, our FFPE workflow does not require costly equipment and can be established in every standard clinical laboratory.
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- 2022
- Full Text
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4. Further structural characterization of ovine forestomach matrix and multi-layered extracellular matrix composites for soft tissue repair
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Ravinder Rajam, Matthew J Smith, Sandi G. Dempsey, Chettha Javanapong, Tanvi Karnik, Barnaby C. H. May, Shane G Dowling, Robert W. F. Veale, Isaac Tristram Tane Mason, Samuel Cutajar, Brandon A Bosque, Roderick G Stanley, Alister Todd Jowsey, Andrew Raymond Campbell, Arun Nagarajan, Michael J Jerram, Jenny Malmström, Claudia G Duston-Fursman, Chloe A F Rayner, Dane Gerneke, and Christopher H. Miller
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Materials science ,cell migration ,Composite number ,Biomedical Engineering ,keratinocyte ,wound healing ,Biocompatible Materials ,Matrix (biology) ,Biomaterials ,Extracellular matrix ,chemistry.chemical_compound ,ovine forestomach matrix ,hyaluronic acid ,Hyaluronic acid ,Animals ,Composite material ,Sheep ,Decellularization ,Tissue Engineering ,Tissue Scaffolds ,Biomaterial ,angioconduction ,Extracellular Matrix ,Characterization (materials science) ,Biomaterials Processing ,chemistry ,decellularized extracellular matrix ,Soft tissue repair - Abstract
Decellularized extracellular matrix (dECM)–based biomaterials are of great clinical utility in soft tissue repair applications due to their regenerative properties. Multi-layered dECM devices have been developed for clinical indications where additional thickness and biomechanical performance are required. However, traditional approaches to the fabrication of multi-layered dECM devices introduce additional laminating materials or chemical modifications of the dECM that may impair the biological functionality of the material. Using an established dECM biomaterial, ovine forestomach matrix, a novel method for the fabrication of multi-layered dECM constructs has been developed, where layers are bonded via a physical interlocking process without the need for additional bonding materials or detrimental chemical modification of the dECM. The versatility of the interlocking process has been demonstrated by incorporating a layer of hyaluronic acid to create a composite material with additional biological functionality. Interlocked composite devices including hyaluronic acid showed improved in vitro bioactivity and moisture retention properties.
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- 2021
5. Translation of 11C-labeled tracer synthesis to a CGMP environment as exemplified by [11C]ER176 for PET imaging of human TSPO
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Yi Zhang, H. Umesha Shetty, Jinsoo Hong, Victor W. Pike, William H Miller, Cheryl L. Morse, and Sanjay Telu
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biology ,medicine.diagnostic_test ,Positron emission tomography ,Chemistry ,TRACER ,Radiosynthesis ,Radiochemistry ,Translocator protein ,biology.protein ,medicine ,Pet imaging ,Imaging brain ,General Biochemistry, Genetics and Molecular Biology - Abstract
Radiotracers labeled with carbon-11 (t1/2 = 20.4 min) are widely used with positron emission tomography for biomedical research. Radiotracers must be produced for positron emission tomography studies in humans according to prescribed time schedules while also meeting current good manufacturing practice. Translation of an experimental radiosynthesis to a current good manufacturing practice environment is challenging. Here we exemplify such translation with a protocol for the production of an emerging radiotracer for imaging brain translocator protein 18 kDa, namely [11C]ER176. This radiotracer is produced by rapid conversion of cyclotron-produced [11C]carbon dioxide into [11C]iodomethane, which is then used to treat N-desmethyl-ER176 in the presence of base (tBuOK) at room temperature for 5 min. [11C]ER176 is separated in high purity by reversed-phase HPLC and formulated for intravenous injection in sterile ethanol-saline. The radiosynthesis is reliable and takes 50 min. Quality control takes another 20 min. All aspects of the protocol, including quality control, are discussed.
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- 2021
6. Remembering Bruce S. McEwen – A tribute from psychoneuroimmunology
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Firdaus S. Dhabhar, Andrew H. Miller, Andrea Danese, and Jennifer C. Felger
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medicine.medical_specialty ,biology ,Endocrine and Autonomic Systems ,business.industry ,Immunology ,Tribute ,Psychoneuroimmunology ,Neuroendocrinology ,Social justice ,Behavioral Neuroscience ,chemistry.chemical_compound ,Endocrinology ,Glucocorticoid Sensitivity ,chemistry ,Transcortin ,Corticosterone ,Internal medicine ,Mental Recall ,medicine ,biology.protein ,business - Published
- 2021
7. Catalytic degradation of ethylene oxide over Ag/α-Al2O3
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Jacob H. Miller, Aditya Bhan, Xinyu Li, and Aniket Joshi
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Catalytic degradation ,Ethylene oxide ,010405 organic chemistry ,Chemistry ,010402 general chemistry ,Combustion ,Photochemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,chemistry.chemical_compound ,Degradation (geology) ,Physical and Theoretical Chemistry ,Bifunctional ,Isomerization ,Oxygenate - Abstract
Ethylene oxide (EO) degradation over Ag/α-Al2O3 catalysts involves bifunctional pathways, whereby α-Al2O3 surfaces catalyze hydration, isomerization, dimerization, and oxidation while Ag surfaces facilitate combustion and isomerization of ethylene oxide. EO degradation reactions run over Ag/α-Al2O3, α-Al2O3, and intrapellet mixtures thereof with co-feeds of O2 and oxygenate products show that Ag surfaces are more reactive than α-Al2O3 and that oxygenate products generated over α-Al2O3 combust over Ag much more (>30x) readily than EO. These observations suggest that additives which mitigate surface hydration of α-Al2O3 and combustion activity of Ag will most effectively mitigate EO degradation.
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- 2020
8. Bliss' and Loewe's additive and synergistic effects in Plasmodium falciparum growth inhibition by AMA1-RON2L, RH5, RIPR and CyRPA antibody combinations
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Yvonne Azasi, Deepak Gaur, Shannon K. Gallagher, Carole A. Long, Rebecca A. Dabbs, Ababacar Diouf, Simon J. Draper, Michael P. Fay, Kazutoyo Miura, Louis H. Miller, Syed Yusuf Mian, David L. Narum, and Jing Jin
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Erythrocytes ,Plasmodium falciparum ,Protozoan Proteins ,Antibodies, Protozoan ,lcsh:Medicine ,Antigens, Protozoan ,Pharmacology ,Article ,chemistry.chemical_compound ,Antigen ,Malaria Vaccines ,parasitic diseases ,medicine ,Apical membrane antigen 1 ,lcsh:Science ,Life Cycle Stages ,Vaccines ,Multidisciplinary ,biology ,Malaria vaccine ,lcsh:R ,biology.organism_classification ,medicine.disease ,Rhoptry neck ,chemistry ,Immunoglobulin G ,biology.protein ,Immunization ,Parasitology ,lcsh:Q ,Antibody ,Growth inhibition ,Malaria - Abstract
Plasmodium invasion of red blood cells involves malaria proteins, such as reticulocyte-binding protein homolog 5 (RH5), RH5 interacting protein (RIPR), cysteine-rich protective antigen (CyRPA), apical membrane antigen 1 (AMA1) and rhoptry neck protein 2 (RON2), all of which are blood-stage malaria vaccine candidates. So far, vaccines containing AMA1 alone have been unsuccessful in clinical trials. However, immunization with AMA1 bound with RON2L (AMA1-RON2L) induces better protection against P. falciparum malaria in Aotus monkeys. We therefore sought to determine whether combinations of RH5, RIPR, CyRPA and AMA1-RON2L antibodies improve their biological activities and sought to develop a robust method for determination of synergy or additivity in antibody combinations. Rabbit antibodies against AMA1-RON2L, RH5, RIPR or CyRPA were tested either alone or in combinations in P. falciparum growth inhibition assay to determine Bliss' and Loewe's additivities. The AMA1-RON2L/RH5 combination consistently demonstrated an additive effect while the CyRPA/RIPR combination showed a modest synergistic effect with Hewlett’s $$S=1.07 \left[95\% \mathrm{C}\mathrm{I}: 1.03, 1.19\right].$$ S = 1.07 95 % C I : 1.03 , 1.19 . Additionally, we provide a publicly-available, online tool to aid researchers in analyzing and planning their own synergy experiments. This study supports future blood-stage vaccine development by providing a solid methodology to evaluate additive and/or synergistic (or antagonistic) effect of vaccine-induced antibodies.
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- 2020
9. In vivo degradation rate of alginate–chitosan hydrogels influences tissue repair following physeal injury
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Nancy H. Miller, Jake P. Newsom, Christopher B. Erickson, Nathan A. Fletcher, Francisco Rodriguez-Fontan, Melissa D. Krebs, Yangyi Yu, Zachary M. Feuer, and Karin A. Payne
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Materials science ,Alginates ,Biomedical Engineering ,chemistry.chemical_element ,Biocompatible Materials ,02 engineering and technology ,Calcium ,Permeability ,Rats, Sprague-Dawley ,Biomaterials ,Chitosan ,03 medical and health sciences ,chemistry.chemical_compound ,Osteogenesis ,In vivo ,Cartilaginous Tissue ,medicine ,Animals ,Growth Plate ,Mechanical Phenomena ,030304 developmental biology ,Wound Healing ,0303 health sciences ,Biomaterial ,Hydrogels ,021001 nanoscience & nanotechnology ,medicine.disease ,Rats ,Cellular infiltration ,Cross-Linking Reagents ,chemistry ,Permeability (electromagnetism) ,Self-healing hydrogels ,Biophysics ,Rheology ,0210 nano-technology - Abstract
The physis is a cartilaginous tissue in children's long bones that is responsible for bone elongation. Physeal injuries can heal with bony repair tissue known as a "bony bar," and this can cause growth deformities. Current treatments involve surgical resection of the bony bar and insertion of inert materials in hopes of preventing bony bar re-formation and preserving bone elongation. However, these materials frequently fail and the bony bar commonly returns. This study investigated alginate-chitosan hydrogels as interpositional materials to block bony bar formation in a rat model of physeal injury. Further, biomaterial properties such as substrate stiffness, permeability, and degradation rate were studied. Different ratio alginate:chitosan hydrogels with or without calcium cross-linking were tested for their inhibition of bony bar formation and restoration of the injured physis. Alginate:chitosan were mixed (a) 90:10 with calcium (90:10 + Ca); (b) 50:50 with calcium (50:50 + Ca); (c) 50:50 without calcium (50:50 - Ca); and (d) 50:50 made with irradiated alginate (IA) and without calcium. We found that repair tissue was determined primarily by the in vivo degradation rate of alginate-chitosan hydrogels. 90:10 + Ca had a slow degradation rate, prevented cellular infiltration, and produced the most bony bar tissue while having softer, more permeable material properties. IA had the fastest degradation, showed high cellular infiltration, and produced the most cartilage-like tissue while having stiffer, less permeable material properties. Our results suggest that the in vivo biomaterial degradation rate is a dynamic property that can be optimized to influence cell fate and tissue repair in physeal injuries.
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- 2020
10. Retroviral Antisense Transcripts and Genes: 33 Years after First Predicted, a Silent Retroviral Revolution?
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Jean-Michel Mesnard, Alexis Zimmer, Nathalie Chazal, Roger H Miller, Gilles Moutot, CyberGenomics Brookeville USA, Université de Strasbourg (UNISTRA), Centre d'Etudes Politiques Et sociaLes : Environnement, Santé, Territoires (CEPEL), Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS), and Institut de Recherche en Infectiologie de Montpellier (IRIM)
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Transcription, Genetic ,Carcinogenesis ,Human Immunodeficiency Virus Proteins ,Retroviridae Proteins ,Review ,Genome, Viral ,antisense protein ,Biology ,Virus Replication ,Genome ,Microbiology ,History, 21st Century ,03 medical and health sciences ,chemistry.chemical_compound ,Open Reading Frames ,ASP ,Viral Envelope Proteins ,oncogenesis ,Humans ,RNA, Antisense ,RNA, Messenger ,Gene ,030304 developmental biology ,Genetics ,0303 health sciences ,Human T-lymphotropic virus 1 ,030306 microbiology ,retrovirology ,Retrovirology ,RNA ,History, 20th Century ,Reverse transcriptase ,QR1-502 ,antisense transcript ,3. Good health ,Antisense RNA ,virology ,Infectious Diseases ,Retroviridae ,chemistry ,Viral replication ,HTLV-1 ,[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology ,HIV-1 ,N virology ,DNA - Abstract
International audience; Paradigm shifts throughout the history of microbiology have typically been ignored, or met with skepticism and resistance, by the scientific community. This has been especially true in the field of virology, where the discovery of a “contagium vivum fluidum”, or infectious fluid remaining after excluding bacteria by filtration, was initially ignored because it did not coincide with the established view of microorganisms. Subsequent studies on such infectious agents, eventually termed “viruses”, were met with skepticism. However, after an abundance of proof accumulated, viruses were eventually acknowledged as defined microbiological entities. Next, the proposed role of viruses in oncogenesis in animals was disputed, as was the unique mechanism of genome replication by reverse transcription of RNA by the retroviruses. This same pattern of skepticism holds true for the prediction of the existence of retroviral “antisense” transcripts and genes. From the time of their discovery, it was thought that retroviruses encoded proteins on only one strand of proviral DNA. However, in 1988, it was predicted that human immunodeficiency virus type 1 (HIV-1), and other retroviruses, express an antisense protein encoded on the DNA strand opposite that encoding the known viral proteins. Confirmation came quickly with the characterization of the antisense protein, HBZ, of the human T-cell leukemia virus type 1 (HTLV-1), and the finding that both the protein and its antisense mRNA transcript play key roles in viral replication and pathogenesis. However, acceptance of the existence, and potential importance, of a corresponding antisense transcript and protein (ASP) in HIV-1 infection and pathogenesis has lagged, despite gradually accumulating theoretical and experimental evidence. The most striking theoretical evidence is the finding that asp is highly conserved in group M viruses and correlates exclusively with subtypes, or clades, responsible for the AIDS pandemic. This review outlines the history of the major shifts in thought pertaining to the nature and characteristics of viruses, and in particular retroviruses, and details the development of the hypothesis that retroviral antisense transcripts and genes exist. We conclude that there is a need to accelerate studies on ASP, and its transcript(s), with the view that both may be important, and overlooked, targets in anti-HIV therapeutic and vaccine strategies.
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- 2021
11. Characterization of AMA1-RON2L complex with native gel electrophoresis and capillary isoelectric focusing
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Dennis Braden, Patrick E. Duffy, Patricia A Gonzales Hurtado, Louis H. Miller, Alec Allee-Munoz, Prakash Srinivasan, Weili Dai, Daming Zhu, and Holly McClellan
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medicine.drug_class ,Clinical Biochemistry ,Glycine ,Protozoan Proteins ,Peptide ,Antigens, Protozoan ,Monoclonal antibody ,Biochemistry ,Analytical Chemistry ,Mice ,parasitic diseases ,Malaria Vaccines ,medicine ,Animals ,Apical membrane antigen 1 ,chemistry.chemical_classification ,biology ,Malaria vaccine ,Isoelectric focusing ,Membrane Proteins ,Blot ,chemistry ,Rhoptry neck ,Polyclonal antibodies ,biology.protein ,Isoelectric Focusing - Abstract
Rhoptry neck protein 2 (RON2) binds to the hydrophobic groove of apical membrane antigen 1 (AMA1), an interaction essential for invasion of red blood cells (RBCs) by Plasmodium falciparum (Pf) parasites. Vaccination with AMA1 alone has been shown to be immunogenic, but unprotective even against homologous challenge in human trials. However, the AMA1-RON2L (L is referred to as the loop region of RON2 peptide) complex is a promising candidate, as preclinical studies with Freund's adjuvant have indicated complete protection against lethal challenge in mice and superior protection against virulent infection in Aotus monkeys. To prepare for clinical trials of the AMA1-RON2L complex, identity and integrity of the candidate vaccine must be assessed, and characterization methods must be carefully designed to not dissociate the delicate complex during evaluation. In this study, we developed a native Tris-glycine gel method to separate and identify the AMA1-RON2L complex, which was further identified and confirmed by Western blotting using anti-AMA1 monoclonal antibodies (mAbs 4G2 and 2C2) and anti-RON2L polyclonal Ab coupled with mass spectrometry. The formation of complex was also confirmed by Capillary Isoelectric Focusing (cIEF). A short term (48 h and 72 h at 4°C) stability study of AMA1-RON2L complex was also performed. The results indicate that the complex was stable for 72 hours at 4°C. Our research demonstrates that the native Tris-glycine gel separation/Western blotting coupled with mass spectrometry and cIEF can fully characterize the identity and integrity of the AMA1-RON2L complex and provide useful quality control data for the subsequent clinical trials. Color online: See article online to view Figs. 1-3 in color. This article is protected by copyright. All rights reserved.
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- 2021
12. Kynurenines increase MRS metabolites in basal ganglia and decrease resting-state connectivity in frontostriatal reward circuitry in depression
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Andrew H. Miller, Valeriya Tsygankova, Diana J. Beltran, Ebrahim Haroon, Xiangchuan Chen, Trusharth Patel, Wendy Baer, Bobbi J. Woolwine, and Jennifer C. Felger
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medicine.medical_specialty ,Kynurenine pathway ,Magnetic Resonance Spectroscopy ,Physiology ,Neurosciences. Biological psychiatry. Neuropsychiatry ,Article ,Basal Ganglia ,Cellular and Molecular Neuroscience ,chemistry.chemical_compound ,Kynurenic acid ,Reward ,Internal medicine ,Basal ganglia ,Human behaviour ,medicine ,Humans ,Biological Psychiatry ,Kynurenine ,Resting state fMRI ,business.industry ,Depression ,Glutamate receptor ,Anhedonia ,Magnetic Resonance Imaging ,Psychiatry and Mental health ,Endocrinology ,chemistry ,medicine.symptom ,business ,RC321-571 ,Quinolinic acid - Abstract
Inflammation is associated with the development of anhedonia in major depression (MD), but the pathway by which inflammatory molecules gain access to the brain and lead to anhedonia is not clear. Molecules of the kynurenine pathway (KP), which is activated by inflammation, readily influx into the brain and generate end products that alter brain chemistry, disrupt circuit functioning, and result in the expression of inflammatory behaviors such as anhedonia. We examined the impact of plasma and CSF KP metabolites on brain chemistry and neural function using multimodal neuroimaging in 49 depressed subjects. We measured markers of glial dysfunction and distress including glutamate (Glu) and myo-inositol in the left basal ganglia using magnetic resonance spectroscopy (MRS); metrics of local activity coherence (regional homogeneity, ReHo) and functional connectivity from resting-state functional MRI measures; and anhedonia from the Inventory for Depressive Symptoms-Self Report Version (IDS-SR). Plasma kynurenine/tryptophan (KYN/TRP) ratio and cerebrospinal fluid (CSF) 3-hydroxykynurenine (3HK) were associated with increases in left basal ganglia myo-inositol. Plasma kynurenic acid (KYNA) and KYNA/QA were associated with decreases and quinolinic acid (QA) with increases in left basal ganglia Glu. Plasma and CSF KP were associated with decreases in ReHo in the basal ganglia and dorsomedial prefrontal regions (DMPFC) and impaired functional connectivity between these two regions. DMPFC-basal ganglia mediated the effect of plasma and CSF KP on anhedonia. These findings highlight the pathological impact of KP system dysregulation in mediating inflammatory behaviors such as anhedonia.
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- 2021
13. Aiding and Abetting Anhedonia: Impact of Inflammation on the Brain and Pharmacological Implications
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Jennifer C. Felger, Mandy Bekhbat, Ebrahim Haroon, Andrew H. Miller, Michael J. Lucido, Michael T. Treadway, and David R. Goldsmith
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Kynurenine pathway ,Anhedonia ,Ventromedial prefrontal cortex ,Reuptake ,chemistry.chemical_compound ,Reward ,Dopamine ,Medicine ,Animals ,Humans ,Neurotransmitter ,Pharmacology ,Inflammation ,Motivation ,business.industry ,Ventral striatum ,Brain ,medicine.anatomical_structure ,chemistry ,Molecular Medicine ,medicine.symptom ,business ,Neuroscience ,medicine.drug ,Quinolinic acid - Abstract
Exogenous administration of inflammatory stimuli to humans and laboratory animals and chronic endogenous inflammatory states lead to motivational deficits and ultimately anhedonia, a core and disabling symptom of depression present in multiple other psychiatric disorders. Inflammation impacts neurotransmitter systems and neurocircuits in subcortical brain regions including the ventral striatum, which serves as an integration point for reward processing and motivational decision-making. Many mechanisms contribute to these effects of inflammation, including decreased synthesis, release and reuptake of dopamine, increased synaptic and extrasynaptic glutamate, and activation of kynurenine pathway metabolites including quinolinic acid. Neuroimaging data indicate that these inflammation-induced neurotransmitter effects manifest as decreased activation of ventral striatum and decreased functional connectivity in reward circuitry involving ventral striatum and ventromedial prefrontal cortex. Neurocircuitry changes in turn mediate nuanced effects on motivation that include decreased willingness to expend effort for reward while maintaining the ability to experience reward. Taken together, the data reveal an inflammation-induced pathophysiologic phenotype that is agnostic to diagnosis. Given the many mechanisms involved, this phenotype represents an opportunity for development of novel and/or repurposed pharmacological strategies that target inflammation and associated cellular and systemic immunometabolic changes and their downstream effects on the brain. To date, clinical trials have failed to capitalize on the unique nature of this transdiagnostic phenotype, leaving the field bereft of interpretable data for meaningful clinical application. However, novel trial designs incorporating established targets in the brain and/or periphery using relevant outcome variables (e.g., anhedonia) are the future of targeted therapy in psychiatry. Significance Statement Emerging understanding of mechanisms by which peripheral inflammation can affect the brain and behavior has created unprecedented opportunities for development of pharmacological strategies to treat deficits in motivation including anhedonia, a core and disabling symptom of depression well represented in multiple psychiatric disorders. Mechanisms include inflammation and cellular and systemic immunometabolism and alterations in dopamine, glutamate, and kynurenine metabolites, revealing a target-rich environment that nevertheless has yet to be fully exploited by current clinical trial designs and drugs employed.
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- 2021
14. Dasatinib stimulates its own mechanism of resistance by activating a CRTC3/MITF/Bcl-2 pathway in melanoma with mutant or amplified c-kit
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Mohammad Krayem, Wilson H. Miller, Malak Sabbah, Ahmad Awada, Ahmad Najem, Fabrice Journe, Ghanem Elias Ghanem, François Sales, and Sonia V. del Rincón
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0301 basic medicine ,MAPK/ERK pathway ,Cancer Research ,Dasatinib ,Antineoplastic Agents ,Apoptosis ,CREB ,03 medical and health sciences ,0302 clinical medicine ,Cell Line, Tumor ,hemic and lymphatic diseases ,medicine ,Humans ,Molecular Biology ,Protein kinase B ,Melanoma ,PI3K/AKT/mTOR pathway ,Cell Proliferation ,Microphthalmia-Associated Transcription Factor ,biology ,integumentary system ,Chemistry ,Mucosal melanoma ,Gene Amplification ,Proteins ,Biologie moléculaire ,medicine.disease ,Microphthalmia-associated transcription factor ,Gene Expression Regulation, Neoplastic ,Cancérologie ,Proto-Oncogene Proteins c-kit ,030104 developmental biology ,Oncology ,Proto-Oncogene Proteins c-bcl-2 ,Drug Resistance, Neoplasm ,030220 oncology & carcinogenesis ,Mutation ,Cancer research ,biology.protein ,medicine.drug ,Signal Transduction ,Transcription Factors - Abstract
Amplification or activating mutations of c-Kit are a frequent oncogenic alteration, which occurs commonly in acral and mucosal melanoma. Among c-Kit inhibitors, dasatinib is the most active due to its ability to bind both active and inactive conformations of the receptor. However, its use as a single agent in melanoma showed limited clinical benefit. We first found that sensitivity to dasatinib is restricted to melanoma cell lines harboring c-Kit alteration but, unexpectedly, we observed lower effect at higher concentrations that can readily be found in patient blood. We then investigated relevant pathway alterations and found complete inhibition of MAPK and PI3K/AKT pathways but an increase in MITF and its downstream target Bcl-2 through CRTC3 pathway, which turn on the CREB regulated transcription of MITF. More importantly, dasatinib upregulates MITF and Bcl-2 through SIK2 inhibition revealed by CRTC3 reduced phosphorylation, CREB transcription activation of MITF, MITF transcription activation of Bcl-2 as well as pigmentation. Furthermore, overexpression of MITF renders melanoma cells resistant to all dasatinib concentrations. Selective Bcl-2 inhibition by ABT-199 or Bcl-2 knockout restores the sensitivity of melanoma cells to dasatinib, validating the involvement of MITF and Bcl-2 axis in the resistance of melanoma to dasatinib. In conclusion, we showed for the first time that dasatinib in melanoma stimulates its proper mechanism of resistance, independently of MAPK and PI3K/AKT pathways reactivation commonly associated to secondary c-Kit mutations, but through CRTC3/MITF/Bcl-2 pathway activation at clinically relevant doses which may explain the weak clinical benefit of dasatinib in patients with melanoma. Implications: Dasatinib stimulates its proper mechanism of resistance through CRTC3/MITF/Bcl-2 pathway, which may explain its modest clinical efficiency in patients with melanoma., SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2021
15. Effect of nitrogen fertilization on flea beetle (Phyllotreta cruciferae) and cabbage seedpod weevil (Ceutorhynchus obstrictus) injury and crop yield in dry land canola
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Shabeg S. Briar, John H. Miller, Gadi V. P. Reddy, Anamika Sharma, and Govinda Shrestha
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0106 biological sciences ,Flea beetle ,food.ingredient ,Crop yield ,Weevil ,Brassica ,food and beverages ,Plant Science ,Biology ,medicine.disease_cause ,biology.organism_classification ,01 natural sciences ,Crop ,010602 entomology ,chemistry.chemical_compound ,food ,Agronomy ,chemistry ,Insect Science ,Seed treatment ,Infestation ,medicine ,Canola ,010606 plant biology & botany - Abstract
Nitrogen (N) availability is an important factor affecting the canola (Brassica napus L.) yield. While N fertilization is commonly used to enhance the yield and quality of canola, it is also known to influence the incidence of insect pests in the crop. The flea beetle Phyllotreta cruciferae (Goeze) and the cabbage seedpod weevil, Ceutorhynchus obstrictus (Marsh), are two economically important pests of canola in the northern Great Plains of the United States. This study investigated the effects of N fertilization (0, 56, 112 and 168 kg/ha) with or without insecticide seed treatment application on P. cruciferae and C. obstrictus injury levels, canola seed yield, and quality in replicated field trials at the two locations (Conrad and Sweet Grass) of north central Montana. The study showed that N fertilization had no influence on P. cruciferae and C. obstrictus injury levels, regardless of the study location or sampling date. However, insecticide seed treatment application significantly influenced P. cruciferae injury ratings at the both locations. In Conrad, insecticide-treated plots had significantly lower injury levels at the four leaf, pre-flower, and pod formation stages but without an effect at the cotyledon stage of canola plants when compared with untreated control plots. Similarly, in Sweet Grass, injury levels were significantly lower in insecticide-treated plots from cotyledon to pre-flowering stages but not at the pod stage of canola plants. In contrast, insecticide seed treatment had no impact on pod infestation rates by C. obstrictus at either location. Insecticide seed treatment, averaged over all the N rates, improved canola seed yield and quality parameters compared to the untreated plots.
- Published
- 2019
16. Verification of I-131Yields from the neutron irradiation of tellurium
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Robbie Haffner, Steve Morris, and William H. Miller
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Work (thermodynamics) ,Radiation ,Materials science ,chemistry.chemical_element ,Irradiation time ,010403 inorganic & nuclear chemistry ,01 natural sciences ,030218 nuclear medicine & medical imaging ,0104 chemical sciences ,Nuclear physics ,03 medical and health sciences ,0302 clinical medicine ,chemistry ,Neutron flux ,Yield (chemistry) ,Tellurium ,Neutron irradiation - Abstract
The production of I-131 for use in medicine can be accomplished by the neutron irradiation of tellurium, typically in the form of TeO2. Unfortunately, the literature contains conflicting data concerning the I-131 yield as a function of neutron fluence, target mass, irradiation time and post-irradiation decay. In this work, the activity of the I-131 was determined using calculations and experimental verifications based on the interplay of these variables.
- Published
- 2019
17. Hamigeran G Does Not Affect Golgi Structure or Function in HEK293 Cells
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Euan R. Russell, A. Jonathan Singh, Catrina Olivera, John H. Miller, and Peter T. Northcote
- Subjects
0303 health sciences ,biology ,010405 organic chemistry ,Chemistry ,HEK 293 cells ,Saccharomyces cerevisiae ,Golgi apparatus ,biology.organism_classification ,Endocytosis ,01 natural sciences ,Yeast ,0104 chemical sciences ,Cell biology ,03 medical and health sciences ,symbols.namesake ,Secretory protein ,Mechanism of action ,medicine ,symbols ,medicine.symptom ,Function (biology) ,030304 developmental biology - Abstract
The hamigerans are diterpenoid secondary metabolites isolated from the New Zealand marine sponge Hamigera tarangaensis. Of all the hamigerans that have been isolated and characterised at Victoria University of Wellington, hamigeran G showed the most potent anti-proliferative activity against a mammalian cancer cell line. We previously reported that it might be targeting the Golgi network of cells based on a chemical genomic screen on yeast (Saccharomyces cerevisiae). Here, we investigated the effects of hamigeran G on the Golgi network of mammalian cells and showed that it did not have a significant effect on Golgi apparatus morphology or Golgi network functions such as protein secretion and endocytosis. Results of this study, therefore, conclude that the Golgi network is unlikely to be the primary target of hamigeran G's anti-proliferative activity. Further work is needed to fully elucidate the mechanism of action and target(s) of hamigeran G.
- Published
- 2019
18. Pyrroloquinoline derivatives from a Tongan specimen of the marine sponge Strongylodesma tongaensis
- Author
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Rose M. A. Gordon, Robert A. Keyzers, John H. Miller, Peter T. Northcote, Kainat Hira, Taitusi Taufa, Muhammad Ali Hashmi, Matthias Lein, and Jane Fromont
- Subjects
biology ,010405 organic chemistry ,Stereochemistry ,Chemistry ,Organic Chemistry ,010402 general chemistry ,biology.organism_classification ,01 natural sciences ,Biochemistry ,Leukemia cell line ,0104 chemical sciences ,Sponge ,chemistry.chemical_compound ,Drug Discovery ,Moiety ,Large group ,Cytotoxicity ,Oxazole - Abstract
Pyrroloquinoline alkaloids are well known bioactive metabolites commonly found from latrunculiid sponges. Two new pyrroloquinoline alkaloids, 6-bromodamirone B (1) and makaluvamine W (2), were isolated from the Tongan sponge Strongylodesma tongaensis. Makaluvamine W (2) contains an oxazole moiety, which is rare in this large group of natural products, and is the first example of a pyrroloquinoline with nitrogen substitution at C-8. Both 1 and 2 lacked activity against a human promyelocytic leukemia cell line (HL-60), supporting the premise that an intact iminoquinone moiety plays a key role in the cytotoxicity of this compound class. The chemotaxonomic impact of these makaluvamine-type compounds is also discussed.
- Published
- 2019
19. Investigating equid mobility in Miocene Florida, USA using strontium isotope ratios
- Author
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Brooke E. Crowley, Joshua H. Miller, and Jenelle P. Wallace
- Subjects
010506 paleontology ,Strontium ,Ecology ,Range (biology) ,Foraging ,Bone bed ,Paleontology ,chemistry.chemical_element ,Vegetation ,010502 geochemistry & geophysics ,Oceanography ,01 natural sciences ,Isotopes of strontium ,chemistry ,Habitat ,Grazing ,Ecology, Evolution, Behavior and Systematics ,Geology ,0105 earth and related environmental sciences ,Earth-Surface Processes - Abstract
Despite extensive research on the evolutionary history and ecology of horses, surprisingly little is known about the daily and seasonal movements (i.e. mobility) of extinct species. We used strontium isotope ratios (87Sr/86Sr) in tooth enamel to estimate mobility patterns of equids from two Miocene fossil sites in northern Florida, USA: Thomas Farm (ca. 18 Ma) and Love Bone Bed (ca. 9.5–9 Ma). The species included in our sample have a range of body sizes (45–252 kg) and reconstructed diets. Gomphotheres and tapirs from Love Bone Bed were also included to represent browsers. Based on modern species' behavior, we predicted small-bodied and browsing taxa living in closed habitats had limited mobility and 87Sr/86Sr similar to local northern Florida limestone. We anticipated larger-bodied and grazing taxa living in open environments had increased mobility, with higher and more variable 87Sr/86Sr reflecting larger movements across differing geologies. Contrary to expectations, the majority of taxa at both sites have higher 87Sr/86Sr than expected for local Eocene bedrock and instead are similar to contemporary Late Oligocene to mid-Miocene seawater. The most plausible explanation for these findings is that most individuals foraged close to the paleo-coastline, where vegetation would have been influenced by marine-derived strontium via sea spray or precipitation. Tapirs have considerably higher and more variable 87Sr/86Sr than horses or gomphotheres at Love Bone Bed, which may reflect foraging on aquatic vegetation in the river channel that is preserved at the site. Our results suggest that horses were relatively sedentary in Florida, even during their peak radiation.
- Published
- 2019
20. Pathways, mechanisms, and kinetics: a strategy to examine byproduct selectivity in partial oxidation catalytic transformations on reducible oxides
- Author
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Aditya Bhan, Jacob H. Miller, and Linh Bui
- Subjects
Fluid Flow and Transfer Processes ,Chemical substance ,010405 organic chemistry ,Chemistry ,Process Chemistry and Technology ,Kinetics ,Oxide ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Isotopic labeling ,chemistry.chemical_compound ,Chemistry (miscellaneous) ,Computational chemistry ,Chemical Engineering (miscellaneous) ,Molecule ,Partial oxidation ,Selectivity - Abstract
Oxidative transformations of organic molecules over reducible oxides provide essential routes for synthesis of high-value unsaturated or oxygen-containing organic compounds that serve as feedstock for synthesis of plastics and resins. Inherent in these transformations are thermodynamic and kinetic challenges associated with unselective and over-oxidation pathways. This review highlights experimental and data analysis techniques effective in elucidating sequential and parallel reaction pathways and mechanisms pervasive in catalytic partial oxidation over reducible oxides, (i) application of Wojciechowski's criteria to first-rank delplots, (ii) product co-feed experiments, (iii) isotopic labeling co-feed experiments, and (iv) probe molecule co-feed experiments. We illustrate that byproduct generation routes during partial oxidation of organic molecules over oxide catalysts exhibit commonalities in pathways that (i) preserve reactant C–C backbone structure, (ii) break C–C bonds, and (iii) form C–C bonds. Further, we show that kinetic modeling invoking either pseudo-first order rate expressions or reactions involving proposed surface intermediates enables quantitative description of consumption and production of byproduct species during catalytic partial oxidation reactions over reducible oxides.
- Published
- 2019
21. An open-label, multicentre safety study of vemurafenib in patients with BRAFV600-mutant metastatic melanoma
- Author
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Piotr Rutkowski, Wilson H. Miller, Ivana Krajsová, Christian U. Blank, Paola Queirolo, Ana Arance, Paul Lorigan, Mario Mandalà, Geke A. P. Hospers, Bart Neyns, Jacob Schachter, Vanna Chiarion Sileni, James Larkin, Martina Makrutzki, Enrique Espinosa, Alexander Guminski, Margarita Donica, Axel Hauschild, Gabriela Liszkay, Marta Nyakas, Michele Del Vecchio, Paolo A. Ascierto, Claus Garbe, Helen Gogas, Michael P. Brown, Clinical sciences, Medical Oncology, Laboratory of Molecular and Medical Oncology, Laboratory of Molecullar and Cellular Therapy, and Guided Treatment in Optimal Selected Cancer Patients (GUTS)
- Subjects
0301 basic medicine ,Oncology ,safety ,Cancer Research ,medicine.medical_specialty ,Dacarbazine ,Population ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Internal medicine ,medicine ,Clinical endpoint ,METASTATIC MELANOMA ,BRAF(V600) mutation ,Vemurafenib ,education ,Cobimetinib ,Medicine(all) ,education.field_of_study ,business.industry ,Melanoma ,medicine.disease ,Clinical trial ,030104 developmental biology ,Tolerability ,chemistry ,030220 oncology & carcinogenesis ,Prognostic scoring system ,business ,medicine.drug - Abstract
BACKGROUND: The oncogenic BRAF inhibitor vemurafenib improves outcomes for patients with advanced BRAFV600 mutation-positive melanoma compared with cytotoxic chemotherapy. Vemurafenib is now approved for use in this patient population.PATIENTS AND METHODS: In this open-label, multicentre study, patients with previously treated or untreated melanoma and the BRAFV600 mutation received vemurafenib 960 mg twice daily. The primary endpoint was safety. In a post hoc analysis, overall survival (OS) was analysed according to a prognostic scoring system developed using Eastern Cooperative Oncology Group performance status, existence of brain metastases and baseline serum lactate dehydrogenase level. The index was validated using data from patients treated with vemurafenib or dacarbazine in three clinical trials and data from patients treated with vemurafenib plus cobimetinib in two studies. The study is registered with ClinicalTrials.gov (NCT01307397).RESULTS: Between March 2011 and January 2013, 3224 patients were enrolled, and 3219 patients received ≥1 dose of vemurafenib (safety population); median follow-up time was 33.4 months. Vemurafenib's long-term benefits were confirmed, and no new safety signals identified. The prognostic index showed between-group differences in OS, with tight, non-overlapping confidence intervals. Validation in a pooled group of 666 vemurafenib-treated clinical trial patients revealed a similar pattern; the pattern was similar in 280 patients treated with vemurafenib plus cobimetinib.CONCLUSIONS: Final results from the vemurafenib safety study confirm vemurafenib's tolerability in BRAFV600 mutation-positive patients and resemble those seen in real-world clinical practice. This index may be useful in patients on combination therapy and as a basis for further work.
- Published
- 2019
22. Unique neuroradiological findings in propionic acidemia
- Author
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Cory M. Pfeifer, Dane Van Tassel, and Jeffrey H. Miller
- Subjects
0301 basic medicine ,lcsh:Medical physics. Medical radiology. Nuclear medicine ,Pathology ,medicine.medical_specialty ,congenital, hereditary, and neonatal diseases and abnormalities ,lcsh:R895-920 ,030105 genetics & heredity ,Cortical volume ,Organic aciduria ,03 medical and health sciences ,0302 clinical medicine ,Atrophy ,medicine ,Radiology, Nuclear Medicine and imaging ,Metabolic disease ,Propionic acidemia ,chemistry.chemical_classification ,business.industry ,Catabolism ,Metabolic disorder ,nutritional and metabolic diseases ,medicine.disease ,Amino acid ,chemistry ,business ,030217 neurology & neurosurgery - Abstract
Propionic acidemia is a rare metabolic disorder that affects the catabolism of branched-chain amino acids and oddchain fatty acids. Propionic acidemia is one of the least common organic acidemias. Presented here are manifestations not previously characterized. The first case is an infant with diffuse subcortical diffusion restriction and vermian atrophy. The second case is an adolescent with asymmetric cortical volume loss and contralateral cortical diffusion restriction. These unique brain MRI findings of propionic acidemia may aid the neuroradiologist in guiding genetic testing for occult metabolic disease. Keywords: Metabolic crisis, Organic aciduria, Propionic acidemia
- Published
- 2018
23. Kynurenines Increase MRS Metabolites in Basal Ganglia and Decrease Resting State Connectivity in Frontostriatal Reward Circuitry in Depression
- Author
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Xiangchuan Chen, Wendy Baer, Andrew H. Miller, Ebrahim Haroon, Bobbi J. Woolwine, Diana J. Beltran, Valeriya Tsygankova, Trusharth Patel, and Jennifer C. Felger
- Subjects
Kynurenine pathway ,Resting state fMRI ,business.industry ,Central nervous system ,Anhedonia ,chemistry.chemical_compound ,medicine.anatomical_structure ,Kynurenic acid ,chemistry ,Basal ganglia ,medicine ,medicine.symptom ,business ,Neuroscience ,Kynurenine ,Quinolinic acid - Abstract
Inflammation is associated with depressive symptoms including anhedonia in patients with major depression. Nevertheless, the mechanisms by which peripheral inflammatory signals are communicated to the brain to influence central nervous system (CNS) function has yet to be fully elucidated. Based on laboratory animal studies, molecules of the kynurenine pathway (KP), which is activated by inflammation, can readily enter the brain, and generate metabolites that can alter neuronal and glial function, leading to behavioral changes. We therefore examined the relationship between KP metabolites in the plasma and cerebrospinal fluid (CSF) and brain chemistry and neural network function using multi-modal neuroimaging in 49 unmedicated, depressed subjects. CNS measures included 1) biochemical markers of glial dysfunction including glutamate (Glu) and myo-inositol (mI) in the left basal ganglia (LBG) using magnetic resonance spectroscopy (MRS); 2) local activity coherence (regional homogeneity, ReHo) and functional connectivity using resting-state functional magnetic resonance imaging; and 3) anhedonia from the Inventory for Depressive Symptoms-Self Reported. Plasma quinolinic acid (QA) was associated with increases and kynurenic acid (KYNA) and KYNA/QA with decreases in LBG Glu. Plasma kynurenine/tryptophan and CSF 3-hydroxy kynurenine (3HK) were associated with increases in LBG mI. Plasma and CSF KP were associated with decreases in ReHo in LBG and dorsomedial prefrontal cortex (DMPFC), and impaired functional connectivity between these two brain regions. DMPFC-BG connectivity mediated the effect of plasma and CSF KP metabolites on anhedonia. These findings highlight the contribution of KP metabolites to glial and neuronal dysfunction and ultimately behavior in depression.
- Published
- 2021
24. Social Experience Regulates Endocannabinoids Modulation of Zebrafish Motor Behaviors
- Author
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Miki Kassai, Stephen A Orr, Thomas H Miller, Sungwoo Ahn, Choongseok Park, and Fadi A. Issa
- Subjects
2-AG ,Cognitive Neuroscience ,Escape response ,Neurosciences. Biological psychiatry. Neuropsychiatry ,Biology ,motor circuits ,03 medical and health sciences ,Behavioral Neuroscience ,chemistry.chemical_compound ,0302 clinical medicine ,Dopamine receptor D1 ,Mauthner cell ,Dopamine ,Biological neural network ,medicine ,JZL184 ,030304 developmental biology ,Original Research ,0303 health sciences ,Dopaminergic ,aggression ,endocannabinoid ,zebrafish ,Endocannabinoid system ,Neuropsychology and Physiological Psychology ,chemistry ,social experience ,Neuroscience ,030217 neurology & neurosurgery ,medicine.drug ,RC321-571 - Abstract
Social status-dependent modulation of neural circuits has been investigated extensively in vertebrate and invertebrate systems. However, the effects of social status on neuromodulatory systems that drive motor activity are poorly understood. Zebrafish form a stable social relationship that consists of socially dominant and subordinate animals. The locomotor behavior patterns differ according to their social ranks. The sensitivity of the Mauthner startle escape response in subordinates increases compared to dominants while dominants increase their swimming frequency compared to subordinates. Here, we investigated the role of the endocannabinoid system (ECS) in mediating these differences in motor activities. We show that brain gene expression of key ECS protein pathways are socially regulated. Diacylglycerol lipase (DAGL) expression significantly increased in dominants and significantly decreased in subordinates relative to controls. Moreover, brain gene expression of the cannabinoid 1 receptor (CB1R) was significantly increased in subordinates relative to controls. Secondly, increasing ECS activity with JZL184 reversed swimming activity patterns in dominant and subordinate animals. JZL184 did not affect the sensitivity of the startle escape response in dominants while it was significantly reduced in subordinates. Thirdly, blockage of CB1R function with AM-251 had no effect on dominants startle escape response sensitivity, but startle sensitivity was significantly reduced in subordinates. Additionally, AM-251 did not affect swimming activities in either social phenotypes. Fourthly, we demonstrate that the effects of ECS modulation of the startle escape circuit is mediated via the dopaminergic system specifically via the dopamine D1 receptor. Finally, our empirical results complemented with neurocomputational modeling suggest that social status influences the ECS to regulate the balance in synaptic strength between excitatory and inhibitory inputs to control the excitability of motor behaviors. Collectively, this study provides new insights of how social factors impact nervous system function to reconfigure the synergistic interactions of neuromodulatory pathways to optimize motor output.
- Published
- 2021
25. Inhibiting the MNK1/2-eIF4E axis impairs melanoma phenotype switching and potentiates antitumor immune responses
- Author
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Fan Huang, Christopher E. Rudd, Mark E. Issa, Jie Su, Tomasz Rzymski, Marina Gimeno, Connie M. Krawczyk, Audrey Emond, Magdalena Masiejczyk, Qianyu Guo, Nahum Sonenberg, Alexandre Benoit, Milena Mazan, Ghanem Elias Ghanem, Dany Plourde, Brendan Cordeiro, Sonia V. del Rincón, Natascha Gagnon, David Dankort, Margarita Bartish, Jacek Faber, Yao Zhan, Mikhael Attias, Elie Khoury, Joelle Rémy-Sarrazin, Christophe Goncalves, Ivan Topisirovic, Alba Galan, H. Uri Saragovi, Ciriaco A. Piccirillo, Fabrice Journe, Wilson H. Miller, and William Yang
- Subjects
0301 basic medicine ,MAP Kinase Signaling System ,medicine.medical_treatment ,T cell ,Programmed Cell Death 1 Receptor ,Melanoma, Experimental ,Mice, Transgenic ,CD8-Positive T-Lymphocytes ,Protein Serine-Threonine Kinases ,Receptor, Nerve Growth Factor ,B7-H1 Antigen ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Antigen ,Cell Line, Tumor ,medicine ,Animals ,Immunity, Cellular ,Chemistry ,Melanoma ,General Medicine ,Immunotherapy ,medicine.disease ,Phenotype ,Immune checkpoint ,Eukaryotic Initiation Factor-4E ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Cancer research ,CD8 ,Research Article - Abstract
Melanomas commonly undergo a phenotype switch, from a proliferative to an invasive state. Such tumor cell plasticity contributes to immunotherapy resistance; however, the mechanisms are not completely understood and thus are therapeutically unexploited. Using melanoma mouse models, we demonstrated that blocking the MNK1/2-eIF4E axis inhibited melanoma phenotype switching and sensitized melanoma to anti–PD-1 immunotherapy. We showed that phospho-eIF4E–deficient murine melanomas expressed high levels of melanocytic antigens, with similar results verified in patient melanomas. Mechanistically, we identified phospho-eIF4E–mediated translational control of NGFR, a critical effector of phenotype switching. Genetic ablation of phospho-eIF4E reprogrammed the immunosuppressive microenvironment, exemplified by lowered production of inflammatory factors, decreased PD-L1 expression on dendritic cells and myeloid-derived suppressor cells, and increased CD8(+) T cell infiltrates. Finally, dual blockade of the MNK1/2-eIF4E axis and the PD-1/PD-L1 immune checkpoint demonstrated efficacy in multiple melanoma models regardless of their genomic classification. An increase in the presence of intratumoral stem-like TCF1(+)PD-1(+)CD8(+) T cells, a characteristic essential for durable antitumor immunity, was detected in mice given a MNK1/2 inhibitor and anti–PD-1 therapy. Using MNK1/2 inhibitors to repress phospho-eIF4E thus offers a strategy to inhibit melanoma plasticity and improve response to anti–PD-1 immunotherapy.
- Published
- 2021
26. Altered selection on a single self-ligand promotes susceptibility to organ-specific T cell infiltration
- Author
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Christine H. Miller, Dana C. Gilmore, Erin J. Adams, Jaime L. Chao, Kenneth S. K. Tung, David E J Klawon, Peter A. Savage, Matthew T. Walker, John D. Leonard, and Ryan K Duncombe
- Subjects
0301 basic medicine ,CD4-Positive T-Lymphocytes ,Male ,Insecta ,Regulatory T cell ,T cell ,Immunology ,chemical and pharmacologic phenomena ,Autoimmunity ,Ligands ,Lymphocyte Activation ,T-Lymphocytes, Regulatory ,Clonal deletion ,Immune tolerance ,Cell Line ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Antigen ,medicine ,Immune Tolerance ,Immunology and Allergy ,Animals ,Antigens ,MHC class II ,biology ,Chemistry ,Brief Definitive Report ,Histocompatibility Antigens Class II ,FOXP3 ,Dendritic Cells ,Cell biology ,Mice, Inbred C57BL ,030104 developmental biology ,medicine.anatomical_structure ,biology.protein ,T cell selection ,Peptides ,Tolerance ,030215 immunology - Abstract
Using mice lacking a single self-peptide, the authors show that altered T cell selection on a single self-ligand predisposes mice to organ-specific T cell infiltration. Proper selection directs cells into the regulatory T cell lineage with negligible evidence of deletion., For the large array of self-peptide/MHC class II (pMHC-II) complexes displayed in the body, it is unclear whether CD4+ T cell tolerance must be imparted for each individual complex or whether pMHC-II–nonspecific bystander mechanisms are sufficient to confer tolerance by acting broadly on T cells reactive to multiple self-pMHC-II ligands. Here, via reconstitution of T cell–deficient mice, we demonstrate that altered T cell selection on a single prostate-specific self-pMHC-II ligand renders recipient mice susceptible to prostate-specific T cell infiltration. Mechanistically, this self-pMHC-II complex is required for directing antigen-specific cells into the Foxp3+ regulatory T cell lineage but does not induce clonal deletion to a measurable extent. Thus, our data demonstrate that polyclonal T reg cells are unable to functionally compensate for a breach in tolerance to a single self-pMHC-II complex in this setting, revealing vulnerabilities in antigen-nonspecific bystander mechanisms of immune tolerance.
- Published
- 2021
27. Functional Analysis of the Collagen Binding Proteins of <named-content content-type='genus-species'>Streptococcus parasanguinis</named-content> FW213
- Author
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Yi-Ywan M. Chen, Zong-Sian Ye, Pei-Hua Tsai, Yu-Wen Huang, James H. Miller, Cheng-Hsun Chiu, Hui-Ru Shieh, Chia-Hua Wu, Jacqueline Abranches, and Yu-Juan Lin
- Subjects
0301 basic medicine ,Streptococcus parasanguinis ,Virulence ,Moths ,Microbiology ,Bacterial Adhesion ,biofilm ,Host-Microbe Biology ,03 medical and health sciences ,Type IV collagen ,0302 clinical medicine ,Bacterial Proteins ,Laminin ,Animals ,Galleria mellonella larva model ,collagen binding proteins ,Adhesins, Bacterial ,Molecular Biology ,biology ,Chemistry ,Biofilm ,Streptococcus ,phagocytosis ,030206 dentistry ,biology.organism_classification ,QR1-502 ,Bacterial adhesin ,Fibronectin ,030104 developmental biology ,Biofilms ,Larva ,Host-Pathogen Interactions ,biology.protein ,Collagen ,Carrier Proteins ,Type I collagen ,Research Article ,Protein Binding - Abstract
Bacteria generally can utilize multiple adhesins to establish themselves in the host. We found that Streptococcus parasanguinis, a dominant oral commensal and an opportunistic pathogen for subacute endocarditis, possesses at least three collagen-binding proteins that enable S. parasanguinis to successfully colonize damaged heart tissues and escape innate immune clearance. The binding specificities of these three proteins for extracellular matrix molecules differ, although all three proteins participate in biofilm formation by S. parasanguinis. The “multiligand for multisubstrate” feature of these adhesins may explain the high adaptability of this microbe to different tissue sites., Streptococcus parasanguinis is a dominant isolate of dental plaque and an opportunistic pathogen associated with subacute endocarditis. As the expression of collagen binding proteins (CBPs) could promote the establishment of S. parasanguinis in the host, the functions of three putative CBP-encoding loci, Spaf_0420, Spaf_1570, and Spaf_1573, were analyzed using isogenic mutant strains. It was revealed that S. parasanguinis FW213 bound effectively to fibronectin and type I collagen, but the strain’s affinity for laminin and type IV collagen was quite low. By using various deletion derivatives, it was found that these three loci mediated the binding of S. parasanguinis to multiple extracellular matrix molecules, with type I collagen as the common substrate. Derivative strains with a deletion in any of the three loci expressed reduced binding to trypsin-treated swine heart valves. The deletion of these loci also reduced the viable count of S. parasanguinis bacteria within macrophages, especially the loss of Spaf_0420, but only strains with deletions in Spaf_0420 and Spaf_1570 expressed reduced virulence in the Galleria mellonella larva model. The deletion of Spaf_1570 and Spaf_1573 affected mainly the structure, but not the overall mass, of biofilm cultures in a flow cell system. Thus, CBPs are likely to be more critical for the initial colonization of S. parasanguinis on host tissues during the development of endocarditis. IMPORTANCE Bacteria generally can utilize multiple adhesins to establish themselves in the host. We found that Streptococcus parasanguinis, a dominant oral commensal and an opportunistic pathogen for subacute endocarditis, possesses at least three collagen-binding proteins that enable S. parasanguinis to successfully colonize damaged heart tissues and escape innate immune clearance. The binding specificities of these three proteins for extracellular matrix molecules differ, although all three proteins participate in biofilm formation by S. parasanguinis. The “multiligand for multisubstrate” feature of these adhesins may explain the high adaptability of this microbe to different tissue sites.
- Published
- 2020
28. Performance Study of Charcoal-based Radon Reduction Systems for Ultraclean Rare Event Detectors
- Author
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Wolfgang Lorenzon, M. Arthurs, E. H. Miller, D.Q. Huang, and CS Amarasinghe
- Subjects
Time projection chamber ,Physics - Instrumentation and Detectors ,Nuclear engineering ,Detector ,FOS: Physical sciences ,chemistry.chemical_element ,Thorium ,Radon ,Instrumentation and Detectors (physics.ins-det) ,Uranium ,Vacuum swing adsorption ,High Energy Physics - Experiment ,High Energy Physics - Experiment (hep-ex) ,Volume (thermodynamics) ,chemistry ,Environmental science ,Sensitivity (control systems) ,Instrumentation ,Mathematical Physics - Abstract
The continuous emanation of radon due to trace amounts of uranium and thorium in detector materials introduces radon to the active detection volume of low-background rare event search detectors. $^{222}$Rn produces a particularly problematic background in the physics region of interest by the ``naked'' beta decay of its $^{214}$Pb daughter nucleus. While charcoal-based adsorption traps are expected to be effective for radon reduction in auxiliary circulation loops that service the warm components of current {ton-scale} detectors at slow flow rates $(0.5-2\;SLPM)$, radon reduction in the entire circulation loop at high flow rates $\mathcal{O}({100s\;SLPM})$ is necessary to reach high sensitivity in future generation experiments. In this article we explore radon dynamics with a charcoal-based radon reduction system in the main circulation loop of time projection chamber detectors. We find that even for perfect radon traps, circulation speeds of $2,000\;SLPM$ are needed to reduce radon concentration in a 10\,ton detector by 90\%. This is faster by a factor of four than the highest circulation speeds currently achieved in dark matter detectors. We further find that the effectiveness of vacuum swing adsorption systems, which have been employed very successfully at reducing atmospheric radon levels in clean-rooms, is limited by the intrinsic radon activity of the charcoal adsorbent in ultra-low radon environments. Adsorbents with significantly lower intrinsic radon activity than in currently available activated charcoals would be necessary to build effective vacuum swing adsorption systems operated at room temperature for rare event search experiments. If such VSA systems are cooled to about $190\,K$, this requirement relaxes drastically., 22 pages, 16 figures
- Published
- 2020
29. 2D Hexagonal Boron Nitride-Coated Cotton Fabric with Self-Extinguishing Property
- Author
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John H. Miller, Satyahari Dey, Partha Kumbhakar, Abhishek Deshmukh, Rushikesh S. Ambekar, Varinder Pal, Chandra Sekhar Tiwary, Leonardo D. Machado, Martha Y. Suárez-Villagrán, and Rakesh Das
- Subjects
Nanocomposite ,Fabrication ,Materials science ,Hexagonal boron nitride ,02 engineering and technology ,engineering.material ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Combustion ,01 natural sciences ,0104 chemical sciences ,chemistry.chemical_compound ,Chemical engineering ,Coating ,chemistry ,Diethylenetriamine ,engineering ,Molecule ,General Materials Science ,0210 nano-technology ,Fire retardant - Abstract
Here, we report on the fabrication of flame retardant hydrophobic cotton fabrics based on the coating with two-dimensional hexagonal boron nitride (2D hBN) nanosheets. A simple one-step solution dipping process was used to coat the fabrics by taking advantage of the strong bonding between diethylenetriamine and hBN on the cotton surface. Exposure to direct flame confirmed the improvement of the flame retardant properties of the coated cotton fabrics. In turn, removal of the flame source revealed self-extinguishing properties. Molecular dynamics simulations indicate that hBN hinders combustion by reducing the rate at which oxygen molecules reach the cotton surface. This time-saving and one-step approach for the fabrication of flame-retardant cotton fabrics offers significant advantages over other, less efficient production methods.
- Published
- 2020
30. Infrared properties of high-purity silicon
- Author
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Kevin H. Miller, Giuseppe Cataldo, Manuel A. Quijada, and Edward J. Wollack
- Subjects
Guided wave testing ,Materials science ,Silicon ,Optical testing ,business.industry ,Infrared ,chemistry.chemical_element ,02 engineering and technology ,021001 nanoscience & nanotechnology ,01 natural sciences ,Atomic and Molecular Physics, and Optics ,010309 optics ,Optics ,chemistry ,0103 physical sciences ,Transmittance ,0210 nano-technology ,business ,Refractive index - Abstract
High-purity silicon is a readily available material of utility in realizing a variety of long-wavelength optical and guided wave components. The transmittance of uncompensated for silicon is measured in the far- and mid-infrared regimes at room and cryogenic temperatures. The experimental and analysis techniques used to extract the refractive index from 100 − 1000 c m − 1 (100–10 µm) are presented, and the results are compared to the literature. An average refractive index below 300 c m − 1 , n ^ ( 300 K ) = 3.417 + i 8.9 × 10 − 5 , which transitions in cooling to n ^ ( 10 K ) = 3.389 + i 4.9 × 10 − 6 , is observed.
- Published
- 2020
31. The CD28 Transmembrane Domain Contains an Essential Dimerization Motif
- Author
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David Oleksyn, Ryan Kelly, Kristin Abramo, Scott A Leddon, James H. Miller, and Margaret M. Fettis
- Subjects
lcsh:Immunologic diseases. Allergy ,0301 basic medicine ,CD28 ,CD3 Complex ,T cell ,Amino Acid Motifs ,Immunology ,knock-in mice ,Mice, Transgenic ,chemical and pharmacologic phenomena ,Ectopic Gene Expression ,Mice ,03 medical and health sciences ,0302 clinical medicine ,CD28 Antigens ,medicine ,Animals ,Humans ,Position-Specific Scoring Matrices ,Immunology and Allergy ,Glycophorin ,Protein Interaction Domains and Motifs ,Amino Acid Sequence ,Protein Dimerization ,Conserved Sequence ,Original Research ,biology ,Chemistry ,Cell Membrane ,hemic and immune systems ,transmembrane domain ,Ligand (biochemistry) ,Transmembrane protein ,Cell biology ,Transmembrane domain ,030104 developmental biology ,medicine.anatomical_structure ,CRISPR ,protein dimerization ,FRET ,biology.protein ,Ectopic expression ,Protein Multimerization ,Signal transduction ,lcsh:RC581-607 ,Signal Transduction ,030215 immunology - Abstract
CD28 plays a critical role in regulating immune responses both by enhancing effector T cell activation and differentiation and controlling the development and function of regulatory T cells. CD28 is expressed at the cell surface as a disulfide linked homodimer that is thought to bind ligand monovalently. How ligand binding triggers CD28 to induce intracellular signaling as well as the proximal signaling pathways that are induced are not well-understood. In addition, recent data suggest inside-out signaling initiated by the T cell antigen receptor can enhance CD28 ligand binding, possibly by inducing a rearrangement of the CD28 dimer interface to allow for bivalent binding. To understand how possible conformational changes during ligand-induced receptor triggering and inside-out signaling are mediated, we examined the CD28 transmembrane domain. We identified an evolutionarily conserved YxxxxT motif that is shared with CTLA-4 and resembles the transmembrane dimerization motif within CD3ζ. We show that the CD28 transmembrane domain can drive protein dimerization in a bacterial expression system at levels equivalent to the well-known glycophorin A transmembrane dimerization motif. In addition, ectopic expression of the CD28 transmembrane domain into monomeric human CD25 can drive dimerization in murine T cells as detected by an increase in FRET by flow cytometry. Mutation of the polar YxxxxT motif to hydrophobic leucine residues (Y145L/T150L) attenuated CD28 transmembrane mediated dimerization in both the bacterial and mammalian assays. Introduction of the Y145L/T150L mutation of the CD28 transmembrane dimerization motif into the endogenous CD28 locus by CRISPR resulted in a dramatic loss in CD28 cell surface expression. These data suggest that under physiological conditions the YxxxxT dimerization motif within the CD28 transmembrane domain plays a critical role in the assembly and/or expression of stable CD28 dimers at the cell surface.
- Published
- 2020
32. Astrocytes Are Required for Oligodendrocyte Survival and Maintenance of Myelin Compaction and Integrity
- Author
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Reshmi Tognatta, Molly T. Karl, Sharyl L. Fyffe-Maricich, Anastas Popratiloff, Eric D. Garrison, Jessica K. Schenck, Mohammad Abu-Rub, and Robert H. Miller
- Subjects
0301 basic medicine ,glutamate ,NMDA receptors ,lcsh:RC321-571 ,03 medical and health sciences ,Myelin ,Cellular and Molecular Neuroscience ,0302 clinical medicine ,myelin maintenance ,medicine ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,Original Research ,Neuromyelitis optica ,biology ,electron microscopy ,Chemistry ,Glutamate receptor ,astrocytes ,medicine.disease ,Oligodendrocyte ,Cell biology ,Myelin basic protein ,030104 developmental biology ,medicine.anatomical_structure ,nervous system ,Myelin maintenance ,biology.protein ,NMDA receptor ,030217 neurology & neurosurgery ,Astrocyte ,Neuroscience - Abstract
Astrocytes have been implicated in regulating oligodendrocyte development and myelination in vitro, although their functions in vivo remain less well defined. Using a novel approach to locally ablate GFAP+ astrocytes, we demonstrate that astrocytes are required for normal CNS myelin compaction during development, and for maintaining myelin integrity in the adult. Transient ablation of GFAP+ astrocytes in the mouse spinal cord during the first postnatal week reduced the numbers of mature oligodendrocytes and inhibited myelin formation, while prolonged ablation resulted in myelin that lacked compaction and structural integrity. Ablation of GFAP+ astrocytes in the adult spinal cord resulted in the rapid, local loss of myelin integrity and regional demyelination. The loss of myelin integrity induced by astrocyte ablation was greatly reduced by NMDA receptor antagonists, both in vitro and in vivo, suggesting that myelin stability was affected by elevation of local glutamate levels following astrocyte ablation. Furthermore, targeted delivery of glutamate into adult spinal cord white matter resulted in reduction of myelin basic protein expression and localized disruption of myelin compaction which was also reduced by NMDA receptor blockade. The pathology induced by localized astrocyte loss and elevated exogenous glutamate, supports the concept that astrocytes are critical for maintenance of myelin integrity in the adult CNS and may be primary targets in the initiation of demyelinating diseases of the CNS, such as Neuromyelitis Optica (NMO).
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- 2020
33. Measurement of the Gamma Ray Background in the Davis Cavern at the Sanford Underground Research Facility
- Author
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A. Biekert, V. A. Kudryavtsev, M. G. D. van der Grinten, C. M. Ignarra, Henrique Araujo, D. Seymour, E. Leason, B. Boxer, A. Naylor, J. McLaughlin, J. Y.K. Hor, A. Murphy, J. E. Cutter, J. Reichenbacher, C. R. Hall, G. Pereira, M. Horn, C. D. Kocher, K. Pushkin, X. Bai, J. Johnson, D. Q. Huang, H. Kraus, C. Carels, X. Liu, J. M. Lyle, T. K. Edberg, A. Lindote, T. Fruth, M. C. Carmona-Benitez, Q. Riffard, L. Kreczko, D. Woodward, M. F. Marzioni, T.M. Stiegler, Juhyeong Lee, T. P. Biesiadzinski, A. Cottle, A. Tomás, S. Balashov, W.T. Kim, F. Neves, K. E. Boast, A. B.M.R. Sazzad, L. Korley, K. Kamdin, Murdock Gilchriese, David Leonard, Robert A. Taylor, Catarina Silva, C. E. Dahl, M. E. Monzani, A. Angelides, D. Temples, P. Brás, M. Solmaz, A. Manalaysay, D. Khaitan, P. Majewski, E. Morrison, T. J. Whitis, Matthew Szydagis, J. Genovesi, J.P. Rodrigues, J. Busenitz, Benjamin Krikler, A. Fan, C. Rhyne, R. J. Gaitskell, J. E. Armstrong, A. Stevens, Ethan Bernard, Bjoern Penning, Michael Schubnell, J. H. Buckley, Ross G. White, I. Stancu, L. Tvrznikova, P.R. Scovell, Daniel McKinsey, W. Ji, K. J. Palladino, I. Olcina, J. A. Morad, H. N. Nelson, N. Marangou, J. A. Nikoleyczik, R. L. Mannino, Michele Cascella, Sergey Burdin, A. Baxter, C. Nedlik, C. Ghag, P. Rossiter, C. Chan, M.I. Lopes, E. K. Pease, V. Bugaev, S. Kravitz, V. N. Solovov, S. Gokhale, S. Alsum, Julie Harrison, K. C. Oliver-Mallory, J. R. Watson, C. Levy, E. H. Miller, F.-T. Liao, S. Luitz, J. Lin, J. Yin, A. Piepke, S. Hans, J. Liao, S. J. Haselschwardt, F. L. H. Wolfs, A. Nilima, S. Uvarov, G. Rutherford, D. R. Tiedt, J. Kras, R. Linehan, Laura Manenti, K. T. Lesko, D. Naim, B. J. Mount, D. S. Akerib, T. A. Shutt, J. J. Wang, J. E. Y. Dobson, L.D. Viveiros, C. Loniewski, S. Shaw, Wolfgang Lorenzon, Elena Korolkova, H. Flaecher, M. Timalsina, O. Jahangir, P. Sorensen, Yue Meng, W.H. Lippincott, A. Cole, K. Stifter, S. Fiorucci, P. A. Terman, R. Liu, Richard Rosero, R. C. Webb, Antonin Vacheret, M. Arthurs, A. Khazov, J.J. Silk, W. C. Taylor, J. Balajthy, A. C. Kaboth, B.L. Paredes, R. W. Schnee, S. Pal, G.R.C. Rischbieter, C. Nehrkorn, S. A. Hertel, E. Druszkiewicz, U. Utku, Mani Tripathi, J. Li, Carl W. Akerlof, Duncan Carlsmith, and Science and Technology Facilities Council (STFC)
- Subjects
Physics - Instrumentation and Detectors ,Dark matter ,FOS: Physical sciences ,Flux ,chemistry.chemical_element ,Cosmic ray ,Astronomy & Astrophysics ,01 natural sciences ,Physics, Particles & Fields ,High Energy Physics - Experiment ,Nuclear physics ,High Energy Physics - Experiment (hep-ex) ,Lead shielding ,Xenon ,Gamma spectroscopy ,0103 physical sciences ,0201 Astronomical and Space Sciences ,010306 general physics ,Underground ,physics.ins-det ,Low background ,Physics ,Science & Technology ,Radiation ,010308 nuclear & particles physics ,hep-ex ,Gamma rays ,Gamma ray ,Astronomy and Astrophysics ,Instrumentation and Detectors (physics.ins-det) ,Nuclear & Particles Physics ,chemistry ,Physical Sciences ,0202 Atomic, Molecular, Nuclear, Particle and Plasma Physics ,Decay chain - Abstract
Deep underground environments are ideal for low background searches due to the attenuation of cosmic rays by passage through the earth. However, they are affected by backgrounds from $\gamma$-rays emitted by $^{40}$K and the $^{238}$U and $^{232}$Th decay chains in the surrounding rock. The LUX-ZEPLIN (LZ) experiment will search for dark matter particle interactions with a liquid xenon TPC located within the Davis campus at the Sanford Underground Research Facility, Lead, South Dakota, at the 4,850-foot level. In order to characterise the cavern background, in-situ $\gamma$-ray measurements were taken with a sodium iodide detector in various locations and with lead shielding. The integral count rates (0--3300~keV) varied from 596~Hz to 1355~Hz for unshielded measurements, corresponding to a total flux in the cavern of $1.9\pm0.4$~$\gamma~$cm$^{-2}$s$^{-1}$. The resulting activity in the walls of the cavern can be characterised as $220\pm60$~Bq/kg of $^{40}$K, $29\pm15$~Bq/kg of $^{238}$U, and $13\pm3$~Bq/kg of $^{232}$Th., Comment: 11 pages, 9 figures
- Published
- 2020
34. Corrosion Problems in Electrical Pumps: Identification and Solution
- Author
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Lina Momani, Ashraf Shalalfeh, Chanyalew Belachew, Anil Midathada, Alfred H. Miller, Deviprakash Jyothshmathi, and J. A. Weliwita
- Subjects
inorganic chemicals ,chemistry.chemical_compound ,Aqueous solution ,Materials science ,chemistry ,Tap water ,Sodium hydroxide ,engineering ,Hydrochloric acid ,Cast iron ,engineering.material ,Corrosion ,Nuclear chemistry - Abstract
The main objective of this study, was to examine the corrosion resistance, of various components of an electric pump. Three types of aqueous solutions, such as tap water, Sodium Hydroxide (NaOH), and Hydrochloric acid (HCL) solutions, were used to examine corrosion rate of components of the pump. Three samples from each pump component were prepared as coupons and samples were soaked in solutions for about 17 days (404 hours). At the end of the soaking, weight loss measurements were taken, from the soaked samples, and accordingly, the corrosion rate for each coupon were calculated. As such, a possible solution for such cases were identified.
- Published
- 2020
35. Oxygen consumption rate of Caenorhabditis elegans as a high-throughput endpoint of toxicity testing using the Seahorse XF(e)96 Extracellular Flux Analyzer
- Author
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Gerhard Engelbrecht, S. Höss, H. Miller, Hendrika Fourie, M. Daneel, G. du Preez, Victor Wepener, Cristian Ricci, M. Zouhar, 21621217 - Du Preez, Gerhard Cornelis, 10148620 - Fourie, Hendrika, 22135189 - Miller, Hayley Christy, 29790514 - Ricci, Cristian, 24137472 - Engelbrecht, Gerhard, and 12579769 - Wepener, Victor
- Subjects
lcsh:Medicine ,010501 environmental sciences ,Toxicology ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,In vivo ,Extracellular ,Caenorhabditis elegans ,lcsh:Science ,030304 developmental biology ,0105 earth and related environmental sciences ,0303 health sciences ,Multidisciplinary ,biology ,Chemistry ,lcsh:R ,High-throughput screening ,Environmental exposure ,biology.organism_classification ,Dose–response relationship ,Biochemistry ,Toxicity ,lcsh:Q ,Growth inhibition ,Flux (metabolism) - Abstract
Caenorhabditis elegans presents functioning, biologically relevant phenotypes and is frequently used as a bioindicator of toxicity. However, most C. elegans in vivo effect-assessment methods are laborious and time consuming. Therefore, we developed a novel method to measure the oxygen consumption rate of C. elegans as a sublethal endpoint of toxicity. This protocol was tested by exposing 50 larval stage one C. elegans individuals for 48 h (at 20 °C) to different concentrations of two toxicants i.e. benzylcetyldimethylammonium chloride (BAC-C16) and cadmium (Cd). Following exposures, the oxygen consumption rate of the C. elegans individuals were measured using the high-throughput functionality of the Seahorse XFe96 Extracellular Flux Analyzer. Dose-response curves for BAC-C16 (R2 = 0.93; P = 0.001) and Cd (R2 = 0.98; P = 0.001) were created. Furthermore, a strong, positive correlation was evidenced between C. elegans oxygen consumption rate and a commonly used, ecologically relevant endpoint of toxicity (growth inhibition) for BAC-C16 (R2 = 0.93; P = 0.0001) and Cd (R2 = 0.91; P = 0.0001). The data presented in this study show that C. elegans oxygen consumption rate can be used as a promising functional measurement of toxicity.
- Published
- 2020
36. Halogenated Meroditerpenoids from a South Pacific Collection of the Red Alga Callophycus serratus
- Author
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Victoria H. Woolner, Rose M. A. Gordon, Peter T. Northcote, Robert A. Keyzers, Matthias Lein, and John H. Miller
- Subjects
Pharmacology ,Pacific Ocean ,Halogenation ,010405 organic chemistry ,Stereochemistry ,Chemistry ,Organic Chemistry ,Pharmaceutical Science ,HL-60 Cells ,Callophycus serratus ,010402 general chemistry ,01 natural sciences ,Leukemia cell line ,Callophycus ,0104 chemical sciences ,Analytical Chemistry ,Scalar coupling ,Complementary and alternative medicine ,Rhodophyta ,Drug Discovery ,Humans ,Molecular Medicine ,Diterpenes - Abstract
A detailed examination of the red alga Callophycus serratus collected in Tonga led to the isolation of six new halogenated meroditerpenoids: callophycol C (1), callophycoic acid I (2), iodocallophycols E (3) and F (4), iodocallophycoic acid B (5), and callophycoic acid J (6). Of these, compounds 3–5 are new iodinated additions to the growing family of Callophycus meroditerpenoids. The relative configurations of compounds 1–6 were deduced by analyses of 1D NOE data and 1H–1H scalar coupling constants, and 3–6 are proposed to differ from the closely related compounds reported in the literature, iodocallophycoic acid A and iodocallophycols A–D. Iodocallophycol E (3) exhibited moderate cytotoxicity against the promyelocytic leukemia cell line HL-60 with an IC50 value of 6.0 μM.
- Published
- 2018
37. Kinetic Modeling of Acrolein Oxidation Over a Promoted Mo−V Oxide Catalyst
- Author
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Aditya Bhan and Jacob H. Miller
- Subjects
010405 organic chemistry ,Organic Chemistry ,Acrolein ,Inorganic chemistry ,Oxide ,010402 general chemistry ,Kinetic energy ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Inorganic Chemistry ,chemistry.chemical_compound ,chemistry ,Partial oxidation ,Physical and Theoretical Chemistry - Published
- 2018
38. Zampanolides B–E from the Marine Sponge Cacospongia mycofijiensis: Potent Cytotoxic Macrolides with Microtubule-Stabilizing Activity
- Author
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John H. Miller, Chloe R. Harland, Vimal Patel, Peter T. Northcote, Tu ikolongahau Halafihi, Ben Jones, Taitusi Taufa, A. Jonathan Singh, and Robert A. Keyzers
- Subjects
Stereochemistry ,Pharmaceutical Science ,Antineoplastic Agents ,Marine Biology ,010402 general chemistry ,Microtubules ,01 natural sciences ,Analytical Chemistry ,Microtubule ,Drug Discovery ,Animals ,Cytotoxicity ,Pharmacology ,Degree of unsaturation ,Molecular Structure ,biology ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,biology.organism_classification ,In vitro ,Porifera ,0104 chemical sciences ,Sponge ,Tubulin ,Complementary and alternative medicine ,Cell culture ,biology.protein ,Molecular Medicine ,Macrolides ,Pharmacophore - Abstract
Four new compounds (2–5) structurally related to the microtubule-stabilizing agent (−)-zampanolide (1) have been isolated from the Tongan marine sponge Cacospongia mycofijiensis. Three of these new structures, zampanolides B–D (2–4), exhibit nanomolar cytotoxicity toward the HL-60 cell line, are antimitotic, and induce in vitro tubulin polymerization at levels comparable to 1. Zampanolide E (5), saturated at C-8/C-9, was significantly less potent and does not stabilize purified tubulin, even at 10-fold higher concentrations. The structural differences across these compounds reveal a plasticity of the zampanolide pharmacophore. While unsaturation is required at Δ8, the configuration of this alkene and those of Δ4 and Δ4′ have little effect on tubulin polymerization. The first natural co-occurrence of 1 and (−)-dactylolide (6) from the same sponge extract is also noted.
- Published
- 2018
39. Reaction Pathways in Acrolein Oxidation over a Mixed‐Oxide Catalyst
- Author
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Aditya Bhan and Jacob H. Miller
- Subjects
010405 organic chemistry ,Organic Chemistry ,Acrolein ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Inorganic Chemistry ,chemistry.chemical_compound ,chemistry ,Polymer chemistry ,Mixed oxide ,Partial oxidation ,Physical and Theoretical Chemistry ,Acrylic acid - Published
- 2018
40. Peloruside E (22-Norpeloruside A), a Pelorusane Macrolide from the New Zealand Marine Sponge Mycale hentscheli, Retains Microtubule-Stabilizing Properties
- Author
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John H. Miller, Sa Weon Hong, A. Jonathan Singh, Peter T. Northcote, Euan R. Russell, Jessica J. Field, and Vimal Patel
- Subjects
0301 basic medicine ,Magnetic Resonance Spectroscopy ,Stereochemistry ,Substituent ,Pharmaceutical Science ,HL-60 Cells ,Microtubules ,01 natural sciences ,Analytical Chemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Microtubule ,Drug Discovery ,Animals ,Humans ,Moiety ,Pharmacology ,biology ,010405 organic chemistry ,Organic Chemistry ,Nuclear magnetic resonance spectroscopy ,biology.organism_classification ,Tubulin Modulators ,Porifera ,0104 chemical sciences ,Sponge ,030104 developmental biology ,Tubulin ,Complementary and alternative medicine ,chemistry ,biology.protein ,Molecular Medicine ,Peloruside A ,Macrolides - Abstract
A new peloruside congener, peloruside E (5), has been isolated in sub-milligram quantities from a specimen of the New Zealand marine sponge Mycale hentscheli. The structure of 5 differs from the parent compound peloruside A (1) by replacement of the C-10 gem-dimethyl moiety with a monomethyl substituent and represents the first structural deviation in the pelorusane scaffold. Peloruside E (5) is potently antiproliferative (HL-60, IC50 90 nM, cf. 1, 19 nM) and polymerizes purified tubulin, albeit at a rate lower than that of 1.
- Published
- 2018
41. Accumulation of 8,9-unsaturated sterols drives oligodendrocyte formation and remyelination
- Author
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William K. Wilson, Matthew S. Elitt, Dharmaraja Allimuthu, Paul J. Tesar, Ilya Bederman, Mayur Madhavan, Franz Bracher, H. Elizabeth Shick, Martin Giera, Joel L. Sax, Jing Jin, Yuriy Fedorov, Eric Garrison, Zita Hubler, Drew J. Adams, Kevin C. Allan, Robert H. Miller, Daniel C. Factor, Matthew A. Thompson, Molly Karl, and Zachary S. Nevin
- Subjects
0301 basic medicine ,Multidisciplinary ,Chemistry ,Regeneration (biology) ,HEK 293 cells ,Cell Differentiation ,Article ,Oligodendrocyte ,Sterol ,Cell biology ,Oligodendroglia ,03 medical and health sciences ,Myelin ,030104 developmental biology ,medicine.anatomical_structure ,Mechanism of action ,medicine ,Humans ,medicine.symptom ,Remyelination ,Myelin Sheath ,Function (biology) - Abstract
Regeneration of myelin is mediated by oligodendrocyte progenitor cells (OPCs), an abundant stem cell population in the CNS and the principal source of new myelinating oligodendrocytes. Loss of myelin-producing oligodendrocytes in the central nervous system (CNS) underlies a number of neurological diseases, including multiple sclerosis (MS) and diverse genetic diseases1–3. Using high throughput chemical screening approaches, we and others have identified small molecules that stimulate oligodendrocyte formation from OPCs and functionally enhance remyelination in vivo4–10. Here we show a broad range of these pro-myelinating small molecules function not through their canonical targets but by directly inhibiting CYP51 (cytochrome P450, family 51), TM7SF2, or EBP (emopamil binding protein), a narrow range of enzymes within the cholesterol biosynthesis pathway. Subsequent accumulation of the 8,9-unsaturated sterol substrates of these enzymes is a key mechanistic node that promotes oligodendrocyte formation, as 8,9-unsaturated sterols are effective when supplied to OPCs in purified form while analogous sterols lacking this structural feature have no effect. Collectively, our results define a unifying sterol-based mechanism-of-action for most known small-molecule enhancers of oligodendrocyte formation and highlight specific targets to propel the development of optimal remyelinating therapeutics.
- Published
- 2018
42. Cardiac metabolic effects of K Na 1.2 channel deletion and evidence for its mitochondrial localization
- Author
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Robert T. Dirksen, Elizabeth A. Jonas, Charles O. Smith, Yves T. Wang, James H. Miller, Paul S. Brookes, Sergiy M Nadtochiy, and Keith Nehrke
- Subjects
0301 basic medicine ,Cardioprotection ,0303 health sciences ,Chemistry ,Research ,Wild type ,Endogeny ,Mitochondrion ,Biochemistry ,Potassium channel ,Cell biology ,03 medical and health sciences ,Electrophysiology ,0302 clinical medicine ,030104 developmental biology ,Mitoplast ,Respiration ,Genetics ,Metabolome ,Patch clamp ,Inner mitochondrial membrane ,Molecular Biology ,030217 neurology & neurosurgery ,030304 developmental biology ,Biotechnology - Abstract
Controversy surrounds the molecular identity of mitochondrial K+ channels that are important for protection against cardiac ischemia-reperfusion injury. While KNa1.2 (Kcnt2 gene) is necessary for cardioprotection by volatile anesthetics, electrophysiologic evidence for a channel of this type in mitochondria is lacking. The endogenous physiologic role of a potential mito-KNa1.2 channel is also unclear. Herein, single channel patch-clamp of 27 independent cardiac mitochondrial inner membrane (mitoplast) preparations from wild type (WT) mice yielded 6 channels matching the known ion-sensitivity, ion-selectivity, pharmacology and conductance properties of KNa1.2 (slope conductance 138±1 pS). However, similar experiments on 40 preparations from Kcnt2-/- mice yielded zero such channels. The KNa opener bithionol uncoupled respiration in WT but not Kcnt2-/- cardiomyocytes. Furthermore, when oxidizing only fat as substrate, Kcnt2-/- cardiomyocytes and hearts were less responsive to increases in energetic demand. Kcnt2-/- mice also had elevated body fat, but no baseline differences in the cardiac metabolome. These data support the existence of a cardiac mitochondrial KNa1.2 channel, and a role for cardiac KNa1.2 in regulating metabolism under conditions of high energetic demand.
- Published
- 2018
43. Beta Skin Dosimetry using Passivated Planar Silicon Detector
- Author
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Modeste Tchakoua Tchouaso and William H. Miller
- Subjects
Radioisotopes ,Silicon ,Range (particle radiation) ,Radiation ,Materials science ,business.industry ,Attenuation ,Detector ,Reproducibility of Results ,chemistry.chemical_element ,Spectral line ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Optics ,chemistry ,030220 oncology & carcinogenesis ,Beta (plasma physics) ,Dosimetry ,business ,Skin - Abstract
Accurate measurement of beta skin dose remains a challenge. This dose is defined as the dose to the basil layer at 7 mg/cm2 (approximately 70 µm) below the surface of the skin and averaged over an area of 1 cm2. This dose is dependent upon the energy of the beta contamination on the surface of the skin, the area of contamination and the attenuation of this radiation through the 7 mg/cm2 epidermal layer. Ideally, knowing the energy spectra of betas at this level below the surface of the skin would allow accurate prediction of dose. In this work, a Passivated Planar Silicon (PIPS) detector was tested by measuring beta spectra in a geometry simulating skin and, from that, estimating dose. Three calibrated beta sources were used, a low energy beta source, (147Pm), a medium energy source, (204Tl), and a high energy beta source, (90Sr/90Y) to cover the range of beta energies typically found in skin contamination events. Modelling utilized the MCNPX and VARSKIN 4.0 computer codes to calculate dose in skin and were found to be in good agreement with each other. Experimental measurements using a 300 µm thick, 3 cm2 PIPS and the three sources identified above showed good agreement with MCNPX results (and thus, also with VARSKIN). Finally, MCNPX modelling compared the dose rates from a commercially available, 100 µm thick, 1.5 cm2 PIPS detector and skin, and found that the beta dose could be accurately predicted within 17% over the range of beta energies tested. This result can be obtained with a single measurement and without the need for post data collection analysis.
- Published
- 2018
44. Comparison of endoscopy and radiographic imaging for detection of esophageal inflammation and remodeling in adults with eosinophilic esophagitis
- Author
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Angelika Zalewski, Matthew J. Nelson, Nelson Moy, Frank H. Miller, Ikuo Hirano, Dyanna L. Gregory, and Nirmala Gonsalves
- Subjects
Adult ,Male ,medicine.medical_specialty ,Adolescent ,Contrast Media ,Gastroenterology ,Young Adult ,03 medical and health sciences ,chemistry.chemical_compound ,Esophagus ,0302 clinical medicine ,Internal medicine ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Young adult ,Eosinophilic esophagitis ,Adverse effect ,Aged ,Retrospective Studies ,Aged, 80 and over ,medicine.diagnostic_test ,Esophagogastroduodenoscopy ,business.industry ,Retrospective cohort study ,Eosinophilic Esophagitis ,Middle Aged ,medicine.disease ,Fibrosis ,Dysphagia ,Endoscopy ,Radiography ,Barium sulfate ,chemistry ,030220 oncology & carcinogenesis ,Esophageal Stenosis ,Female ,030211 gastroenterology & hepatology ,Esophagoscopy ,Barium Sulfate ,medicine.symptom ,Deglutition Disorders ,business - Abstract
Background and Aims Eosinophil predominant mucosal inflammation is central to the diagnosis and activity assessment of eosinophilic esophagitis (EoE). Esophageal mural remodeling is an important consequence of EoE that is responsible for adverse events of dysphagia, food impaction, and esophageal stenosis. The aim of this study was to compare upper endoscopy (EGD) with barium upper GI study (UGI) for the detection of esophageal inflammation and remodeling in adults with EoE. Methods A retrospective review on a single-center database of adults with confirmed EoE identified those with EGD and UGI performed within 6 months of each another. Studies were reviewed for mucosal inflammatory and remodeling abnormalities. Results Seventy patients were included. Initial UGI results were consistent with EoE in 10% and suggestive of EoE in 39%. Review of UGI by a senior GI radiologist increased detection of changes consistent with EoE (34%). EGD identified characteristic abnormalities in 93%, which was significantly greater than UGI (67%). Inflammatory features were more frequently appreciated on EGD (74%) compared with UGI (21%). There was no significant difference in fibrostenotic changes observed on EGD (84%) versus UGI (73%). Conclusions EGD and UGI have similar sensitivity for identifying the remodeling consequences of EoE; however, inflammatory features are better assessed on EGD. Inadequate sensitivity of UGI for composite features of EoE limits its capabilities as a diagnostic test, although radiologists' awareness significantly increases the diagnostic yield of UGI. UGI and EGD may identify fibrostenotic changes unappreciated by its counterpart and thus provide complementary information in select patients.
- Published
- 2018
45. Reactions to Both Nonionic Iodinated and Gadolinium-Based Contrast Media: Incidence and Clinical Characteristics
- Author
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Brenda Schmitz, Cecil G. Wood, Amirhossein Mozaffary, Vahid Yaghmai, Frank H. Miller, and Faezeh Sodagari
- Subjects
Adult ,Gadolinium DTPA ,Male ,media_common.quotation_subject ,Gadolinium ,Contrast Media ,chemistry.chemical_element ,030218 nuclear medicine & medical imaging ,Drug Hypersensitivity ,03 medical and health sciences ,Meglumine ,0302 clinical medicine ,Iodinated contrast ,Risk Factors ,Organometallic Compounds ,Humans ,Contrast (vision) ,Medicine ,Radiology, Nuclear Medicine and imaging ,In patient ,reproductive and urinary physiology ,Aged ,Retrospective Studies ,media_common ,Aged, 80 and over ,business.industry ,Incidence ,Incidence (epidemiology) ,General Medicine ,Middle Aged ,Contrast medium ,Primary reaction ,chemistry ,030220 oncology & carcinogenesis ,embryonic structures ,Female ,Nuclear medicine ,business ,Iodine - Abstract
The objective or our study was to assess the incidence rate and clinical characteristics of allergiclike reactions in patients who received both nonionic iodinated contrast medium (ICM) and gadolinium-based contrast medium (GBCM).Acute allergiclike reactions in patients who received both ICM and GBCM to nonionic ICM or GBCM injections during a 5-year period were analyzed. Allergy preparation was not administered when patients received a different type of contrast material. Acute allergiclike reactions to both ICM and GBCM were evaluated.Of 302,858 contrast injections (155,234 ICM and 147,624 GBCM) during a 5-year period, 1006 (752 ICM and 254 GBCM) acute allergiclike contrast reactions were reported. The overall rate of reaction to ICM was 0.48% (95% CI, 0.45-0.52%), and the overall rate of reaction to GBCM was 0.17% (95% CI, 0.15-0.19%). A total of 19,237 patients received at least one ICM injection and one GBCM injection, with a total of 56,310 injections (19,237 initial injections and 37,073 subsequent injections). Nine patients had reactions to both ICM and GBCM with the primary reaction rate of 9/19,237 (incidence rate, 0.047%; 95% CI, 0.044-0.050%), and the secondary reaction rate of 9/37,073 (incidence rate, 0.024%; 95% CI, 0.023-0.026%). All secondary reactions in patients who had a reaction to both ICM and GBCM were mild. None of the patients required medication for the treatment of the secondary reaction.An allergiclike reaction to both nonionic ICM and GBCM was an extremely rare event that presented as a mild acute reaction without significant clinical consequences despite the fact that an allergy preparation was not administered.
- Published
- 2018
46. Toll-like receptor 9 antagonizes antibody affinity maturation
- Author
-
Haewon Sohn, Jeff Skinner, Brandon P. Theall, Mirna Pena, Alexander S. Roesler, Juraj Kabat, Pietro Miozzo, Susan K. Pierce, Jinghua Lu, Ann S. Kim, David W. Dorward, Billur Akkaya, Eric Dahlstrom, Louis H. Miller, Munir Akkaya, and Travis Henke
- Subjects
0301 basic medicine ,Immunology ,Antigen presentation ,Antibody Affinity ,Lymphocyte Activation ,Article ,Affinity maturation ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Antigen ,Malaria Vaccines ,medicine ,Animals ,Humans ,Immunology and Allergy ,Receptor ,B cell ,Antigen Presentation ,biology ,Chemistry ,Antibody titer ,TLR9 ,Germinal Center ,Cell biology ,030104 developmental biology ,medicine.anatomical_structure ,Toll-Like Receptor 9 ,Antibody Formation ,biology.protein ,Antibody ,030215 immunology - Abstract
Key events in T cell–dependent antibody responses, including affinity maturation, are dependent on the B cell’s presentation of antigen to helper T cells at critical checkpoints in germinal-center formation in secondary lymphoid organs. Here we found that signaling via Toll-like receptor 9 (TLR9) blocked the ability of antigen-specific B cells to capture, process and present antigen and to activate antigen-specific helper T cells in vitro. In a mouse model in vivo and in a human clinical trial, the TLR9 agonist CpG enhanced the magnitude of the antibody response to a protein vaccine but failed to promote affinity maturation. Thus, TLR9 signaling might enhance antibody titers at the expense of the ability of B cells to engage in germinal-center events that are highly dependent on B cells’ capture and presentation of antigen. The presentation of antigen by germinal-center B cells to follicular T cells engenders the process of antibody affinity maturation and humoral memory. Pierce and colleagues show that TLR9 signaling in B cells antagonizes B cell–mediated antigen presentation, which leads to the enhanced generation of short-lived plasma cells and the production of lower-affinity antibodies.
- Published
- 2018
47. Infected erythrocytes expressing DC13 PfEMP1 differ from recombinant proteins in EPCR-binding function
- Author
-
J. Alexandra Rowe, Jianbing Mu, Louis H. Miller, Yvonne Azasi, Ashfaq Ghumra, and Gabriella Lindergard
- Subjects
0301 basic medicine ,Erythrocytes ,endothelium ,030106 microbiology ,Plasmodium falciparum ,malaria ,Malaria, Cerebral ,Protozoan Proteins ,Receptors, Cell Surface ,Plasma protein binding ,Microbiology ,Epitope ,law.invention ,Cell Line ,03 medical and health sciences ,EPCR ,Epitopes ,Antigen ,law ,parasitic diseases ,Humans ,Endothelium ,Malaria, Falciparum ,RNA, Small Interfering ,Cell adhesion ,Receptor ,Endothelial protein C receptor ,Multidisciplinary ,Chemistry ,Microcirculation ,Brain ,Endothelial Protein C Receptor ,cell adhesion ,Biological Sciences ,Recombinant Proteins ,3. Good health ,Cell biology ,Bacterial adhesin ,PfEMP1 ,Molecular Weight ,030104 developmental biology ,Recombinant DNA ,Oligopeptides ,Protein Binding - Abstract
Significance Sequestration of Plasmodium falciparum-infected erythrocytes (IEs) in the brain microvasculature underlies the pathology of cerebral malaria. Parasites that express P. falciparum erythrocyte membrane protein 1 of domain cassette (DC) 8 and DC13 types bind to brain endothelial cells. Recent studies, largely based on recombinant proteins, have identified endothelial protein C receptor (EPCR) as the key receptor for endothelial cell binding. Using DC8- and DC13-expressing IEs, we show that binding of DC13 IEs to brain endothelial cells is not EPCR-dependent and that cytoadhesion of EPCR-binding DC8 IEs to brain endothelial cells is blocked by human serum. This study highlights differences between recombinant protein and native protein in EPCR-binding properties and suggests that other receptors are also required for sequestration in cerebral malaria., Recent advances have identified a new paradigm for cerebral malaria pathogenesis in which endothelial protein C receptor (EPCR) is a major host receptor for sequestration of Plasmodium falciparum-infected erythrocytes (IEs) in the brain and other vital organs. The parasite adhesins that bind EPCR are members of the IE variant surface antigen family Plasmodium falciparum erythrocyte membrane protein 1 (PfEMP1) containing specific adhesion domains called domain cassette (DC) 8 and DC13. The binding interaction site between PfEMP1 and EPCR has been mapped by biophysical and crystallography studies using recombinant proteins. However, studies examining the interaction of native PfEMP1 on the IE surface with EPCR are few. We aimed to study binding to EPCR by IEs expressing DC8 and DC13 PfEMP1 variants whose recombinant proteins have been used in key prior functional and structural studies. IE binding to EPCR immobilized on plastic and on human brain endothelial cells was examined in static and flow adhesion assays. Unexpectedly, we found that IEs expressing the DC13 PfEMP1 variant HB3var03 or IT4var07 did not bind to EPCR on plastic and the binding of these variants to brain endothelial cells was not dependent on EPCR. IEs expressing the DC8 variant IT4var19 did bind to EPCR, but this interaction was inhibited if normal human serum or plasma was present, raising the possibility that IE–EPCR interaction may be prevented by plasma components under physiological conditions. These data highlight a discrepancy in EPCR-binding activity between PfEMP1 recombinant proteins and IEs, and indicate the critical need for further research to understand the pathophysiological significance of the PfEMP1–EPCR interaction.
- Published
- 2018
48. Development of a PET radioligand for potassium channels to image CNS demyelination
- Author
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Richard Freifelder, Brian Popko, Xiang Zhang, Falguni Basuli, Robert H. Miller, Shih-Hsun Cheng, Pedro Brugarolas, Daniel S. Reich, Chin-Tu Chen, Jerome J. Lacroix, Dhanabalan Murali, Andrew V. Caprariello, Onofre T. DeJesus, Rolf E. Swenson, Hsiu-Ming Tsai, Francisco Bezanilla, Peter Herscovitch, and Jorge E. Sánchez-Rodríguez
- Subjects
0301 basic medicine ,Male ,Fluorine Radioisotopes ,Potassium Channels ,CNS demyelination ,Central nervous system ,lcsh:Medicine ,Article ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Neuroimaging ,medicine ,Radioligand ,Animals ,Humans ,4-Aminopyridine ,Radioactive Tracers ,lcsh:Science ,Multidisciplinary ,medicine.diagnostic_test ,Chemistry ,Multiple sclerosis ,lcsh:R ,medicine.disease ,Macaca mulatta ,Potassium channel ,3. Good health ,Rats ,030104 developmental biology ,medicine.anatomical_structure ,Positron emission tomography ,Positron-Emission Tomography ,Female ,lcsh:Q ,Neuroscience ,030217 neurology & neurosurgery ,medicine.drug ,Demyelinating Diseases - Abstract
Central nervous system (CNS) demyelination represents the pathological hallmark of multiple sclerosis (MS) and contributes to other neurological conditions. Quantitative and specific imaging of demyelination would thus provide critical clinical insight. Here, we investigated the possibility of targeting axonal potassium channels to image demyelination by positron emission tomography (PET). These channels, which normally reside beneath the myelin sheath, become exposed upon demyelination and are the target of the MS drug, 4-aminopyridine (4-AP). We demonstrate using autoradiography that 4-AP has higher binding in non-myelinated and demyelinated versus well-myelinated CNS regions, and describe a fluorine-containing derivative, 3-F-4-AP, that has similar pharmacological properties and can be labeled with 18F for PET imaging. Additionally, we demonstrate that [18F]3-F-4-AP can be used to detect demyelination in rodents by PET. Further evaluation in Rhesus macaques shows higher binding in non-myelinated versus myelinated areas and excellent properties for brain imaging. Together, these data indicate that [18F]3-F-4-AP may be a valuable PET tracer for detecting CNS demyelination noninvasively.
- Published
- 2018
49. The Effect of Efavirenz on Estradiol Metabolism in Transgender Women
- Author
-
Babak Tehrani, Cynthia H. Miller, Matthew C. Leinung, and Jalaja Joseph
- Subjects
Gender dysphoria ,medicine.medical_specialty ,Efavirenz ,medicine.drug_class ,Medroxyprogesterone ,lcsh:Special situations and conditions ,Short Report ,Medicine (miscellaneous) ,Gender Studies ,chemistry.chemical_compound ,estradiol ,Internal medicine ,Transgender ,medicine ,business.industry ,lcsh:RC952-1245 ,HIV ,efavirenz ,Metabolism ,medicine.disease ,transgender ,Endocrinology ,chemistry ,Estrogen ,medroxyprogesterone ,Hormonal therapy ,business ,metabolism ,hormones, hormone substitutes, and hormone antagonists ,Hormone ,medicine.drug - Abstract
The goal of hormonal therapy in treating gender dysphoria is to maintain cross-sex hormone levels in the normal physiological range for the desired gender. Estrogen is the mainstay of hormonal therapy for male to female transgender patients. Efavirenz, a non-nucleoside reverse-transcriptase inhibitor, has been one of the most commonly prescribed antiretroviral therapies (ARTs). However, this regimen has also given rise to the most clinically significant drug–drug interactions between ARTs and hormone-based contraceptives. We discuss here three transgender HIV-positive women in whom efavirenz effected the metabolism of orally administered estradiol (and probably medroxyprogesterone).
- Published
- 2019
50. βIII-tubulin overexpression in cancer: Causes, consequences, and potential therapies
- Author
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Arun Kanakkanthara and John H. Miller
- Subjects
Cancer Research ,biology ,business.industry ,Cancer ,Class III β-tubulin ,macromolecular substances ,Class iii ,Drug resistance ,medicine.disease ,chemistry.chemical_compound ,Tubulin ,Oncology ,Paclitaxel ,chemistry ,Neoplasms ,Genetics ,medicine ,biology.protein ,Cancer research ,Humans ,business - Abstract
Class III β-tubulin (βIII-tubulin) is frequently overexpressed in human tumors and is associated with resistance to microtubule-targeting agents, tumor aggressiveness, and poor patient outcome. Understanding the mechanisms regulating βIII-tubulin expression and the varied functions βIII-tubulin may have in different cancers is vital to assess the prognostic value of this protein and to develop strategies to enhance therapeutic benefits in βIII-tubulin overexpressing tumors. Here we gather all the available evidence regarding the clinical implications of βIII-tubulin overexpression in cancer, describe factors that regulate βIII-tubulin expression, and discuss current understanding of the mechanisms underlying βIII-tubulin-mediated resistance to microtubule-targeting agents and tumor aggressiveness. Finally, we provide an overview of emerging therapeutic strategies to target tumors that overexpress βIII-tubulin.
- Published
- 2021
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