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In the two-step vitamin C fermentation process, its precursor 2-keto-L-gulonic acid was synthesized from L-sorbose by mixed culture of Gluconobacter oxydans and Bacillus megaterium. The interaction between Gluconobacter oxydans and Bacillus megaterium remains unclear and it is a challenge to mathematically model the mixed growth of these two strains. The Monod-type equations were previously proposed to describe the coupled growth of Gluconobacter oxydans and Bacillus megaterium. However, in this study, we modeled the interaction of these two strains in a macroscopic view by introducing the population theory. Taking account of the fact that the density or concentration of Gluconobacter oxydans or Bacillus megaterium was hardly to measure accurately in the mixed culture broth, the data of concentrations of the substrate and product were used to indirectly investigate the relation between these two strains. Three batch experiments were used to validate our model. And according to the values of identified parameters, the type of interaction between Gluconobacter oxydans and Bacillus megaterium was concluded to be predation, where Gluconobacter oxydans was predator, and Bacillus megaterium was prey.

Effects of the sieve plate on hydrodynamics and mass transfer in an annulus sparged airlift reactor (0.08 m 3 , 1.3 m tall, and 0.284 m in diameter) were investigated. It is found that the sieve plate can significantly enhance gas holdup and volumetric mass transfer coefficient. The sieve pore plays an important role in breaking up bubbles. With a given free area ratio, the sieve plate with a larger sieve pore diameter is more efficient in increasing the volumetric mass transfer coefficient. Four different free area ratios between 37% and 73% are tested, and then an optimal free area ratio is determined. The effect of the sieve plate is found to be related to sparger types. The sieve plate leads to a larger increase of volumetric mass transfer coefficient with the O-ring distributor as compared to the 4-orifice nozzle. Empirical correlations and a hydrodynamic model are proposed to predict gas holdup, volumetric mass transfer coefficient and liquid velocity in airlift reactors with sieve plates.

A dynamic model called hybrid cybernetic model (HCM) based on structured metabolic network is established for simulating mammalian cell metabolism featured with partially substitutable and partially complementary consumption patterns of two substrates, glucose and glutamine. Benefiting from the application of elementary mode analysis (EMA), the complicated metabolic network is decomposed into elementary modes (EMs) facilitating the employment of the hybrid cybernetic framework to investigate the external and internal flux distribution and the regulation mechanism among them. According to different substrate combination, two groups of EMs are obtained, i.e., EMs associated with glucose uptake and simultaneous uptake of glucose and glutamine. Uptake fluxes through various EMs are coupled together via cybernetic variables to maximize substrate uptake. External fluxes and internal fluxes could be calculated and estimated respectively, by the combination of the stoichiometrics of metabolic networks and fluxes through regulated EMs. The model performance is well validated via three sets of experimental data. Through parameter identification of limited number of experimental data, other external metabolites are precisely predicted. The obtained kinetic parameters of three experimental cultures have similar values, which indicates the robustness of the model. Furthermore, the prediction performance of the model is successfully validated based on identified parameters.

Selective catalytic reduction (SCR) with ammonia or urea is regarded as one of the most important technologies to reduce the NO x emissions from coal-fired power plants. However, the design and development of SCR–DeNO x systems are a complicated process involving the optimization of several parameters such as the ammonia/urea injection strategy, the installment of the gate leaf and the hybrid grid, as well as the thickness of straightener. These parameters determine the velocity and concentration distributions at the entrance of catalyst layers, which are key factors to affect the efficiency of flue gas denitrification and ammonia slip. In this work, CFD simulations are carried out to portray the performance of the SCR–DeNO x facility in a 300 MW coal-fired power plant. The influences of the gate leaf, hybrid grid and straightener on the distributions of the velocity and concentration are investigated. And then the corresponding experiments are performed to qualitatively confirm the simulation results.

A set of kinetic models have been developed for the production of 2-keto-L-gulonic acid from L-sorbose by a mixed culture of Gluconobacter oxydans and Bacillus megaterium. A metabolic pathway is proposed for Gluconobacter oxydans, and a macrokinetic model has been developed for Gluconobacter oxydans, where the balances of some key metabolites, ATP and NADH are taken into account. An unstructured model is proposed for concomitant bacterium Bacillus megaterium. In the macrokinetic model and unstructured model, the mechanism of interaction between Gluconobacter oxydans and Bacillus megaterium is investigated and modeled. The specific substrate uptake rate and the specific growth rate obtained from the macrokinetic model are then coupled into a bioreactor model such that the relationship between the substrate feeding rate and the main state variables, such as the medium volume, the biomass concentrations, the substrate, and the is set up. A closed loop regulator model is introduced to approximate the induction of enzyme pool during lag phase after inoculation. Experimental results demonstrate that the model is able to describe 2-keto-L-gulonic acid fermentation process with reasonable accuracy.

The origin and coupling of pressure fluctuations in an internal loop airlift bioreactor are investigated. The pressure fluctuations in the reactor are divided into two categories: global pressure fluctuations and local pressure fluctuations. It is found that the coupling between global pressure fluctuations and local pressure fluctuations mainly focuses in the frequency region between 10 and 30 Hz. Local pressure fluctuations in the reactor are strongly affected by pressure waves originating from the air-supply system, while pressure fluctuations caused by the bubble eruption at the liquid surface have less influence on local pressure fluctuations. Based on the coherence analysis, the pressure signal at a certain position in the reactor is decomposed into three different parts: coherent part, joint incoherent part and exclusive incoherent part. The energy ratios of these different parts are helpful to study the interaction among pressure fluctuations from different sources. Three flow regimes were identified from the evolution of the energy ratio of the joint incoherent part. © 2011 Canadian Society for Chemical Engineering

A macrokinetic model describing mycelium growth and product formation in fed-batch fermentation of Penicillium chrysogenum is proposed on the basis of intracellular metabolic pathway networks found in the literature. The model is composed of the stoichiometric balance equations for carbon source, ATP, NADH and pyruvate. A regulator model is used as an auxiliary part to simulate the lag phase at the beginning of product synthesis. Combining the macrokinetic model with the bioreactor model, one yields the relationship between manipulating variables, i.e., the substrate feeding rate, and the other state variables such as biomass, substrate and product concentrations. The rolling parameter identification is then applied to online identify the most sensitive model parameters dealing with the model mismatch caused by time-variant kinetic changes. Model validation was performed with the data of 22 batches from industrial-scale penicillin cultivation. Finally, the predictions of the product concentration, up to 24 h ahead, are carried out with an average prediction error of less than 3.5%.

Structured packed columns are widely used in the chemical industry for distillation and absorption. However, the understanding of the transfer mechanism behind the counter-current gas-liquid flow in structured packed columns is still limited. In this work, a three-dimensional CFD model that considers the local absorption and the local momentum transfer mechanism is developed for a film flow on a small plate with a counter-current gas flow. The model, based on the Volume of Fluid (VOF) method, is built up on the basis of a pressure drop model and the penetration theory to quantitatively investigate the instantaneous hydrodynamics and mass transfer characteristics of the liquid phase. Simulations and experiments are carried out for a system consisting of propane and toluene. A comparison of the simulation results with the experimental data for the outlet concentrations shows good agreement.

The local edge detector cells play a fundamental role in the visual system. They may be involved in the control of eye movement and visual attention. However, few studies have been devoted to modeling their behaviors. In this study, a feedforward multi-subunit spatiotemporal model is proposed for local edge detector cells in the cat retina. The model is able to describe their responses to drifting sinusoidal gratings, alternating sinusoidal gratings, flashing spots and annuli, and these model responses are qualitatively consistent with the physiological observations. The organization of the model maps the anatomical structure of the cat retina well, and the model may be useful in explaining ON-OFF retinal cells in other vertebrates.

A cybernetic model is developed to model the dynamics of mammalian cell growth and metabolism. Especially, the formation of the byproducts such as ammonia and alanine are taken into account in the model. The production of these byproducts is mainly regulated by the competition between transamination and deamination. In addition, amino acids utilization for protein formation and energy supply is also involved due to lysine limitation found in our experiments. The model is able to simulate the transients of the substrate and byproduct concentrations, the viable and dead biomass as well as the intracellular concentrations of the intermediates and enzymes. Myeloma cell cultivations are applied to validate the model.

The electrophilic cyclization of 1,2-allenic phosphonates with in-situ-generated PhTeX to afford 4-(phenyltelluro)-2-methoxy-2,5-dihydro[1,2]-oxaphosphole 2-oxides was studied. Good yields were observed when PhTeBr was used as the electrophilic reagent. The stereochemistry of the reaction is also discussed in the paper.

Recurrent network models are widely used to characterize the behaviors of neurons in the visual cortex. However, they are seldom used to simulate neurons in the retina. In this study, two slightly different recurrent network models are introduced to describe two types of non-concentric ganglion cells, i.e., the impressed-by-contrast cell and the suppressed-by-contrast cell in the cat retina. By simulations, it is found that the additive recurrent network is able to describe qualitatively the behavior of the impressed-by-contrast cell, while the other additive recurrent network with saturation rectification is able to describe qualitatively the behavior of the suppressed-by-contrast cell.

A cell cycle model is proposed for methylotrophic yeast Pichia pastoris grown on glycerol during fed-batch cultivation. Morphological differentiation of cells, such as unbudded daughter cell, unbudded parent cell and budding cell, is depicted by the model. During the cyclic growth, cells in different cycling period are assumed to undergo sequential shifting dominantly. The input of the cell cycle model is the specific growth rate, which is calculated from the macrokinetic model proposed previously. The cell cycle related variables, such as the fraction of budding cells and the cell density are then simulated. Model validation is carried out with the experimental data of off-line assays.

An oxygen transfer model was established for Pichia pastoris growing on glycerol and methanol in a stirred tank bioreactor and expressing a recombinant human serum albumin (rHSA). This was based on pseudo-steady state mass balance, where the volumetric O2 transfer coefficient, k L a, was estimated as a function of power input per unit volume and aeration rate. Under pseudo-steady state, the O2 transfer rate model matched the O2 uptake rate obtained from a previous macrokinetic model. This procedure was also applied to estimate biomass concentration by using the on-line rolling identification approach.

We report a convenient and highly efficient method for the synthesis of beta-organotellurobutenolides by the aryltellurenyl halides-induced electrophilic tellurolactonization of alpha-allenoic acids under mild conditions. The resulting beta-organotellurobutenolides can be utilized as precursors for versatile butenolide derivatives through a substitution reaction with organocuprate reagent or Pd/Cu(I)-catalyzed cross-coupling with terminal alkyne.

Pichia pastoris has been widely used as a host for the expression of heterologous proteins. This paper deals with the glycerol and methanol optimal feeding control in the cultivation of P. pastoris expressing recombinant human serum albumin. An earlier proposed macrokinetic model and a cell cycle model were used to determine the substrate feeding profiles. In the glycerol growth phase, the goal of substrate feeding control is to obtain high cell density as well as the desired level of the fraction of budding cells, while in the methanol growth phase, the goal of substrate feeding is to control the specific growth rate at various set-points. The effect of both glycerol and methanol feeding control strategies were evaluated experimentally. It was found that the productivity may be enhanced if the fraction of budding cells at the end of the glycerol growth phase is minimized and if the specific growth rate during the methanol phase controlled between 0.005 and 0.006 h-1.

A structured kinetic model, which takes account of major metabolic pathways of glycerol and methanol in Pichia pastoris, is presented. Based on the combined kinetic and bioreactor model, feeding profiles of methanol are detennined with the aim of maintaining constant specific growth rate during production stage. Compared with the decreasing type of specific growth rate resulted from constant feeding profile in the standard protocol, the constant specific growth rate is believed to be advantageous for improving the productivity. Experimental results indicate that simulations of biomass and protein concentration agree well with the measured data, and the specific growth rates were successfully controlled at various set points.

A macrokinetic model for Pichia pastoris expressing recombinant human serum albumin is proposed. The model describes the balances of some key metabolites, ATP and NADH, during glycerol and methanol metabolism. In the glycerol growth phase, the metabolic pathways mainly include phosphorylation, glycolysis, tricarboxylic acid cycle, and respiratory chain. In the methanol growth phase, methanol is oxidized to formaldehyde at first. Then, while a part of formaldehyde is oxidized to formate, the rest is condensed with xylulose-5-monophosphate to form glyceraldehyde-3-phosphate, and further assimilated to form cell constituents. The metabolic pathways following glyceraldehyde-3-phosphate were assumed to be similar to those in the glycerol growth phase. Based on the model, the macrokinetic bioreaction rates such as the specific substrate consumption rate, the specific growth rate, the specific acetyl-CoA formation rate as well as the specific oxygen uptake rate are obtained. The specific substrate consumption rate and the specific growth rate are then coupled into a bioreactor model such that the relationship between substrate feeding rates and the main state variables, i.e., the medium volume, the concentrations of the biomass, the substrate, and the product, is set up. Experimental results demonstrate that the model can describe the cell growth and the protein production with reasonable accuracy.