1. Antitumor agents 7. Synthesis, antiproliferative activity and molecular modeling of new l-lysine-conjugated pyridophenoxazinones as potent DNA-binding ligands and topoisomerase IIα inhibitors
- Author
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Antonio Lavecchia, Anna Cioce, Silvana Pedatella, Michele Manfra, Carmen Cerchia, A. Bolognese, Pedatella, S., Cerchia, C., Manfra, M., Cioce, A., Bolognese, A., and Lavecchia, A.
- Subjects
Models, Molecular ,Molecular model ,Carboxamide ,Antiproliferative activity ,Ligands ,01 natural sciences ,Antineoplastic Agent ,chemistry.chemical_compound ,Drug Discovery ,Topoisomerase II Inhibitors ,0303 health sciences ,Molecular Structure ,General Medicine ,DNA, Neoplasm ,Docking studie ,Linear Model ,Human ,Base pair ,medicine.drug_class ,DNA damage ,Stereochemistry ,Oxazine ,Ligand ,Antineoplastic Agents ,03 medical and health sciences ,Structure-Activity Relationship ,Cell Line, Tumor ,Oxazines ,medicine ,Pyridophenoxazinone ,Humans ,030304 developmental biology ,Cell Proliferation ,Pharmacology ,Binding Sites ,Dose-Response Relationship, Drug ,010405 organic chemistry ,Lysine ,Organic Chemistry ,Binding Site ,0104 chemical sciences ,DNA Topoisomerases, Type II ,chemistry ,Docking (molecular) ,Linear Models ,Neoplastic cell ,Topoisomerase-II Inhibitor ,Drug Screening Assays, Antitumor ,DNA ,Topoisomerase II inhibitor - Abstract
A series of l -lysine-conjugated pyridophenoxazinones 2–5 and 2′-5′ were designed and synthesized for developing compounds with multimodal anticancer potentialities. All compounds inhibited the proliferation of a panel of human liquid and solid neoplastic cell lines. 2 and 5 were the most active compounds with IC50 values in the submicromolar range. UV–vis, 1H NMR, unwinding, and docking experiments demonstrated that they intercalate between the middle 5′-GC-3′ base pairs with the carboxamide side chain lying into major groove. Charge-transfer contribution to the complex stability, evaluated by ab initio calculations, was found to correlate with cytotoxicity. Relaxation and cleavage assays showed that 2 and 5 selectively target Topo IIα over Topo IIβ and stimulate the formation of covalent Topo II–DNA complexes, functioning as poisons. Moreover, compound 5 induced DNA damage and arrested MCF-7 cells at the G2/M phase. Altogether, the work provides interesting structure-activity relationships in the pyridophenoxazinone- l -lysine conjugate series and identifies 5 as a promising candidate for further in vivo evaluation.
- Published
- 2019