1. A stable QTL qSalt-A04-1 contributes to salt tolerance in the cotton seed germination stage
- Author
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Yan Zhang, Zhiying Ma, Liqiang Wu, Ke Huifeng, Zhengwen Sun, Qishen Gu, Guiyin Zhang, Xingfen Wang, Chenchen Liu, Xing Lv, Wei Rong, Zhengwen Liu, and Jun Yang
- Subjects
0106 biological sciences ,Candidate gene ,Quantitative Trait Loci ,Germination ,Quantitative trait locus ,01 natural sciences ,Chromosomes, Plant ,chemistry.chemical_compound ,Gene Expression Regulation, Plant ,Arabidopsis ,Genetics ,Gibberellic acid ,Plant Proteins ,Gossypium ,biology ,Gene Expression Profiling ,Chromosome Mapping ,Salt Tolerance ,General Medicine ,biology.organism_classification ,Salinity ,Horticulture ,chemistry ,Seedling ,Phytotron ,Seeds ,Agronomy and Crop Science ,010606 plant biology & botany ,Biotechnology - Abstract
A stable QTL qSalt-A04-1 for salt tolerance in the cotton seed germination stage, and two candidate genes, GhGASA1 and GhADC2, that play negative roles by modulating the GA and PA signalling pathways, respectively, were identified. The successful transition of a seed into a seedling is a prerequisite for plant propagation and crop yield. Germination is a vulnerable stage in a plant’s life cycle that is strongly affected by environmental conditions, such as salinity. In this study, we identified a novel quantitative trait locus (QTL) qRGR-A04-1 associated with the relative germination rate (RGR) after salt stress treatment based on a high-density genetic map under phytotron and field conditions, with LOD values that ranged from 6.65 to 16.83 and 6.11–12.63% phenotypic variations in all five environmental tests. Two candidate genes with significantly differential expression between the two parents were finally identified through RNA-seq and qRT-PCR analyses. Further functional analyses showed that GhGASA1- and GhADC2-overexpression lines were more sensitive to salt stress than wild-type Arabidopsis based on the regulation of the transcript levels of gibberellic acid (GA)- and polyamine (PA)- related genes in GA and PA biosynthesis and the reduction in the accumulation of GA and PA, respectively, under salt stress. Virus-induced gene silencing analysis showed that TRV:GASA1 and TRV:ADC2 were more tolerant to salt stress than TRV:00 based on the increased expression of GA synthesis genes and decreased H2O2 content, respectively. Taken together, our results suggested that QTL qRGR-A04-1 and its two harboured genes, GhGASA1 and GhADC2, are promising candidates for salt tolerance improvement in cotton.
- Published
- 2021
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