14 results on '"Simeng Zhao"'
Search Results
2. Correction to 'A Novel G Protein-Biased and Subtype-Selective Agonist for a G Protein-Coupled Receptor Discovered from Screening Herbal Extracts'
- Author
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Bingjie Zhang, Simeng Zhao, Dehua Yang, Yiran Wu, Ye Xin, Haijie Cao, Xi-Ping Huang, Xiaoqing Cai, Wen Sun, Na Ye, Yueming Xu, Yao Peng, Suwen Zhao, Zhi-Jie Liu, Guisheng Zhong, Ming-Wei Wang, and Wenqing Shui
- Subjects
Chemistry ,QD1-999 - Published
- 2020
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3. Structure-Based Design of Dual-Acting Compounds Targeting Adenosine A2A Receptor and Histone Deacetylase as Novel Tumor Immunotherapeutic Agents
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Wenzhong Yan, Yiran Wu, Chengying Xie, Ruiquan Liu, Suwen Zhao, Simeng Zhao, Jinfeng Zhang, Hualiang Jiang, Kexin Yang, Jianjun Cheng, Lijun Ling, and Guisheng Zhong
- Subjects
Tumor microenvironment ,Chemistry ,Adenosine A2A receptor ,Adenosine ,Adenosine receptor ,In vitro ,HDAC1 ,Drug Discovery ,Cancer research ,medicine ,Molecular Medicine ,Histone deacetylase ,IC50 ,medicine.drug - Abstract
Adenosine is an immunosuppressive factor in the tumor microenvironment mainly through activation of the A2A adenosine receptor (A2AR), which is a mechanism hijacked by tumors to escape immune surveillance. Small-molecule A2AR antagonists are being evaluated in clinical trials as immunotherapeutic agents, but their efficacy is limited as standalone therapies. To enhance the antitumor effects of A2AR antagonists, dual-acting compounds incorporating A2AR antagonism and histone deacetylase (HDAC) inhibitory actions were designed and synthesized, based on co-crystal structures of A2AR. Compound 24e (IHCH-3064) exhibited potent binding to A2AR (Ki = 2.2 nM) and selective inhibition of HDAC1 (IC50 = 80.2 nM), with good antiproliferative activity against tumor cell lines in vitro. Intraperitoneal administration of 24e (60 mg/kg, bid) inhibited mouse MC38 tumor growth with a tumor growth inhibition rate of 95.3%. These results showed that dual-acting compounds targeting A2AR and HDAC are potentially immunotherapeutic agents that are worth further exploring.
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- 2021
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4. Elucidation of Distinct Modular Assemblies of Smoothened Receptor by Bitopic Ligand Measurement
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Wanglong Lu, Suwen Zhao, Fei Xu, Fang Zhou, Guisheng Zhong, Dongxiang Xue, Tangjie Gu, Xiaoyan Liu, Rongyan Li, Yiran Wu, Yanli Qiu, Yueming Xu, Tao Hu, Houchao Tao, Fei Zhao, Simeng Zhao, and Zhong-Xing Jiang
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Binding Sites ,genetic structures ,Pyridines ,Chemistry ,Ligand ,Ligands ,Smoothened Receptor ,Hydroxycholesterols ,Polyethylene Glycols ,Mice ,Transmembrane domain ,HEK293 Cells ,Protein Domains ,Drug Discovery ,NIH 3T3 Cells ,Biophysics ,Animals ,Humans ,Molecular Medicine ,Anilides ,Receptor ,Linker - Abstract
Class F G protein-coupled receptors are characterized by a large extracellular domain (ECD) in addition to the common transmembrane domain (TMD) with seven α-helixes. For smoothened receptor (SMO), structural studies revealed dissected ECD and TMD, and their integrated assemblies. However, distinct assemblies were reported under different circumstances. Using an unbiased approach based on four series of cross-conjugated bitopic ligands, we explore the relationship between the active status and receptor assembly. Different activity dependency on the linker length for these bitopic ligands corroborates the various occurrences of SMO assembly. These results reveal a rigid "near" assembly for active SMO, which is in contrast to previous results. Conversely, inactive SMO adopts a free ECD, which would be remotely captured at "far" assembly by cholesterol. Altogether, we propose a mechanism of cholesterol flow-caused SMO activation involving an erection of ECD from far to near assembly.
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- 2021
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5. Organized cannabinoid receptor distribution in neurons revealed by super-resolution fluorescence imaging
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Jie Yang, Shanshan Li, Simeng Zhao, Tong Wang, Min Diao, Cuiping Tian, Zhi-Jie Liu, Fangzhi Tan, Tian Hua, Garth John Thompson, Ying Zhang, Chao-Po Lin, Dylan Deska-Gauthier, Wenqing Shui, Guisheng Zhong, Ya Qin, Hui Li, and Quan Wang
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Male ,0301 basic medicine ,Agonist ,Fluorescence-lifetime imaging microscopy ,Cannabinoid receptor ,medicine.drug_class ,medicine.medical_treatment ,Science ,General Physics and Astronomy ,Article ,General Biochemistry, Genetics and Molecular Biology ,Rats, Sprague-Dawley ,03 medical and health sciences ,0302 clinical medicine ,Receptor, Cannabinoid, CB1 ,medicine ,Animals ,Super-resolution microscopy ,Receptor ,lcsh:Science ,Cells, Cultured ,Cytoskeleton ,G protein-coupled receptor ,Mice, Knockout ,Neurons ,Multidisciplinary ,Chemistry ,musculoskeletal, neural, and ocular physiology ,Brain ,Fluorescence recovery after photobleaching ,food and beverages ,General Chemistry ,Cellular neuroscience ,Axons ,Molecular Imaging ,Cell biology ,Mice, Inbred C57BL ,030104 developmental biology ,Microscopy, Fluorescence ,nervous system ,Female ,lcsh:Q ,lipids (amino acids, peptides, and proteins) ,Cannabinoid ,psychological phenomena and processes ,030217 neurology & neurosurgery ,Intracellular ,Fluorescence Recovery After Photobleaching - Abstract
G-protein-coupled receptors (GPCRs) play important roles in cellular functions. However, their intracellular organization is largely unknown. Through investigation of the cannabinoid receptor 1 (CB1), we discovered periodically repeating clusters of CB1 hotspots within the axons of neurons. We observed these CB1 hotspots interact with the membrane-associated periodic skeleton (MPS) forming a complex crucial in the regulation of CB1 signaling. Furthermore, we found that CB1 hotspot periodicity increased upon CB1 agonist application, and these activated CB1 displayed less dynamic movement compared to non-activated CB1. Our results suggest that CB1 forms periodic hotspots organized by the MPS as a mechanism to increase signaling efficacy upon activation., Despite the importance of G-protein-coupled receptors in many cellular functions, their intracellular organisation is largely unknown. The authors identified periodically repeating clusters of cannabinoid receptor 1 hotspots within neuronal axons that are dynamically regulated by CB1 agonists.
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- 2020
6. A Novel G Protein-Biased and Subtype-Selective Agonist for a G Protein-Coupled Receptor Discovered from Screening Herbal Extracts
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Ye Xin, Zhi-Jie Liu, Wenqing Shui, Guisheng Zhong, Ming-Wei Wang, Wen Sun, Suwen Zhao, Na Ye, Yueming Xu, Dehua Yang, Yao Peng, Xiaoqing Cai, Bingjie Zhang, Simeng Zhao, Yiran Wu, Xi Ping Huang, and Haijie Cao
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Agonist ,010405 organic chemistry ,G protein ,Drug discovery ,medicine.drug_class ,General Chemical Engineering ,General Chemistry ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,chemistry.chemical_compound ,Chemistry ,Biochemistry ,chemistry ,Opioid receptor ,medicine ,Functional selectivity ,Aporphine ,Receptor ,QD1-999 ,G protein-coupled receptor - Abstract
Subtype selectivity and functional bias are vital in current drug discovery for G protein-coupled receptors (GPCRs) as selective and biased ligands are expected to yield drug leads with optimal on-target benefits and minimal side-effects. However, structure-based design and medicinal chemistry exploration remain challenging in part because of highly conserved binding pockets within subfamilies. Herein, we present an affinity mass spectrometry approach for screening herbal extracts to identify active ligands of a GPCR, the 5-HT2C receptor. Using this method, we discovered a naturally occurring aporphine 1857 that displayed strong selectivity for activating 5-HT2C without activating the 5-HT2A or 5-HT2B receptors. Remarkably, this novel ligand exhibited exclusive bias toward G protein signaling for which key residues were identified, and it showed comparable in vivo efficacy for food intake suppression and weight loss as the antiobesity drug, lorcaserin. Our study establishes an efficient approach to discovering novel GPCR ligands by exploring the largely untapped chemical space of natural products.
- Published
- 2020
7. Rational Remodeling of Atypical Scaffolds for the Design of Photoswitchable Cannabinoid Receptor Tools
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Raymond C. Stevens, Dongxiang Xue, Guisheng Zhong, Guoxun Zheng, Fang Zhou, Yueming Xu, Linshan Xie, Suwen Zhao, Zhi-Jie Liu, Tian Hua, Cuiping Tian, Fei Li, Houchao Tao, Fei Zhao, Simeng Zhao, Tao Hu, and Alexandros Makriyannis
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Cannabinoid receptor ,Photoswitch ,Light ,Binding pocket ,Subtype selectivity ,CHO Cells ,Molecular Dynamics Simulation ,Ligands ,Molecular Docking Simulation ,Receptor, Cannabinoid, CB2 ,chemistry.chemical_compound ,Cricetulus ,Azobenzene ,chemistry ,Drug Design ,Drug Discovery ,Cannabinoid receptor type 2 ,Biophysics ,Molecular Medicine ,Animals ,Humans ,Azo Compounds - Abstract
Azobenzene-embedded photoswitchable ligands are the widely used chemical tools in photopharmacological studies. Current approaches to azobenzene introduction rely mainly on the isosteric replacement of typical azologable groups. However, atypical scaffolds may offer more opportunities for photoswitch remodeling, which are chemically in an overwhelming majority. Herein, we investigate the rational remodeling of atypical scaffolds for azobenzene introduction, as exemplified in the development of photoswitchable ligands for the cannabinoid receptor 2 (CB2). Based on the analysis of residue-type clusters surrounding the binding pocket, we conclude that among the three representative atypical arms of the CB2 antagonist, AM10257, the adamantyl arm is the most appropriate for azobenzene remodeling. The optimizing spacer length and attachment position revealed AzoLig 9 with excellent thermal bistability, decent photopharmacological switchability between its two configurations, and high subtype selectivity. This structure-guided approach gave new impetus in the extension of new chemical spaces for tool customization for increasingly diversified photo-pharmacological studies and beyond.
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- 2021
8. Cyclopalitins A and B, nortriterpenoids from aerial parts of Cyclocarya paliurus
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Chunpeng Wan, Guanghua Huo, Yuyan Li, Simeng Zhao, Chang-Jiu Ji, Wen-Wen Peng, and Yanling Zhang
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Chromatography ,biology ,010405 organic chemistry ,Chemistry ,Electrospray ionization ,Plant Science ,biology.organism_classification ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,Paliurus ,Agronomy and Crop Science ,Cyclocarya ,Two-dimensional nuclear magnetic resonance spectroscopy ,Biotechnology - Abstract
Two novel nortriterpenoids, cyclopalitins A and B (1 and 2), were isolated from aerial parts of Cyclocarya paliurus. Their structures were elucidated on the basis of extensive spectroscopic analyses including high-resolution electrospray ionization mass spectrometry (HR-ESI-MS), 1D NMR and 2D NMR. Compounds 1 and 2 were tested for their cytotoxicity towards B16F10. The results revealed that they didn’t show cytotoxic activity against B16F10 with 10 ug/mL treatment for 48 h.
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- 2019
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- View/download PDF
9. Enhanced antiproliferative effect of resveratrol in head and neck squamous cell carcinoma using GE11 peptide conjugated liposome
- Author
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Yun Chen, Li Liu, Huanhuan Feng, Ziqian Zhou, Xiaohe Bai, Tao Yu, Simeng Zhao, Haitao Xiao, Yuseng Zhang, Jiao Peng, Ying Li, Tingting Zheng, and Yu Shi
- Subjects
0301 basic medicine ,Mice, Nude ,Antineoplastic Agents ,Resveratrol ,resveratrol ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Cell Line, Tumor ,Genetics ,medicine ,Cytotoxic T cell ,Animals ,Humans ,Epidermal growth factor receptor ,Amino Acid Sequence ,Particle Size ,Cell Proliferation ,Liposome ,Oncogene ,biology ,Cell Death ,Squamous Cell Carcinoma of Head and Neck ,apoptosis ,Cancer ,virus diseases ,General Medicine ,Articles ,respiratory system ,medicine.disease ,Head and neck squamous-cell carcinoma ,Drug Liberation ,030104 developmental biology ,chemistry ,Apoptosis ,030220 oncology & carcinogenesis ,liposome ,Liposomes ,Cancer research ,biology.protein ,epidermal growth factor receptors ,head and neck cancer ,Female ,Peptides - Abstract
The present study describes the preparation of a dodecapeptide YHWYGYTPQNVI (GE11)‑conjugated liposome bound with polyethylene glycol to enhance the therapeutic effect of resveratrol (RSV) in head and neck cancer cells. The results indicated that (RSV)‑loaded GE11‑conjugated liposomes (RSV‑GL) exhibited a high entrapment efficiency of >95%, with an active drug loading level of 19.5% w/w. Release kinetics revealed that RSV was released in a slow and sustained manner from the RSV‑GL and RSV‑loaded liposome (RSV‑L) nanoparticulate systems. The epidermal growth factor receptor (EGFR)‑overexpressing squamous cell carcinoma HN cells specifically internalized GE11 surface‑conjugated liposome in a manner that was markedly increased compared with that of the non‑targeted carrier. Consistently, RSV‑GL exhibited a significantly increased cytotoxic effect compared with that of the non‑targeted nanoparticles. Notably, RSV‑GL induced significantly increased proportions of early (~60%) and late (~10%) apoptotic cells in head and neck cancer cell populations. To the best of our knowledge, the application and development of EGFR‑targeted peptide‑conjugated liposome system for RSV delivery has not been studied previously in the treatment of head and neck cancer. In addition, RSV‑GL exhibited the greatest antitumor efficacy compared with any other group. RSV‑GL exhibited a 2‑fold decrease in tumor volume compared with the free RSV and a 3‑fold decrease in volume compared with the control. Overall, the nanomedicine strategy described in the present study may potentially advance the chemotherapy‑based treatment of head and neck cancer, with promising applications in other EGFR‑overexpressing tumors.
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- 2019
10. Organized cannabinoid receptor distribution in neurons revealed by super-resolution fluorescence imaging
- Author
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Quan Wang, Zhi-Jie Liu, Tian Hua, Wenqing Shui, Guisheng Zhong, Min Diao, Tian Cuiping, Garth John Thompson, Chao-Po Lin, Simeng Zhao, Jie Yang, Fangzhi Tan, Hui Li, Tong Wang, Shanshan Li, Dylan Deska-Gauthier, and Ying Zhang
- Subjects
Agonist ,Fluorescence-lifetime imaging microscopy ,congenital, hereditary, and neonatal diseases and abnormalities ,Cannabinoid receptor ,medicine.drug_class ,Chemistry ,food and beverages ,CANNABINOID RECEPTOR 1 ,Superresolution ,Cell biology ,medicine ,Receptor ,Intracellular ,G protein-coupled receptor - Abstract
G-protein-coupled receptors (GPCRs) play important roles in cellular functions. However, their intracellular organization is largely unknown. Through investigation of the cannabinoid receptor 1 (CB1), we discovered periodically repeating clusters of CB1 hotspots within the axons of neurons. We observed these CB1 hotspots interact with the membrane-associated periodic skeleton (MPS) forming a complex crucial in the regulation of CB1 signaling. Furthermore, we found that CB1 hotspot periodicity increased upon CB1 agonist application, and these activated CB1 displayed less dynamic movement compared to non-activated CB1. Our results suggest that CB1 forms periodic hotspots organized by the MPS as a mechanism to increase signaling efficacy when being activated.
- Published
- 2020
- Full Text
- View/download PDF
11. Rapid high-throughput determination of major components and amino acids in a single peanut kernel based on portable near-infrared spectroscopy combined with chemometrics
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Hongzhi Liu, S.M. van Ruth, Hongwei Yu, Simeng Zhao, Sara W. Erasmus, and Qiang Wang
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0106 biological sciences ,Sucrose ,Correlation coefficient ,Raw material ,01 natural sciences ,Chemometrics ,BU Authenticity & Bioassays ,Partial least squares regression ,Partial least square regression ,Chromatography ,010405 organic chemistry ,Chemistry ,Portable NIRS device ,Single kernels ,food and beverages ,0104 chemical sciences ,Arachis hypogaea ,Food Quality and Design ,BU Authenticiteit & Bioassays ,Peanut ,Protein body ,Principal component analysis ,Amino acids ,Compositional data ,Agronomy and Crop Science ,010606 plant biology & botany - Abstract
The quality traits of peanuts (Arachis hypogaea L.) are fundamental to the whole peanut industry. However, many common analyses require the sample to be brought to the laboratory. Therefore, this research explores the feasibility of portable near-infrared spectroscopy combined with a single detection accessory to analyse the composition of peanuts in a single seed level quantitatively. The single detection accessory was specifically designed for spectral data collection considering the internal and external characteristics of single peanuts. Confocal laser scanning microscopy revealed that the oil body and protein body were randomly distributed at cell of single peanuts. The external characteristics of single peanuts were also determined and considered length (11.32–24.25 mm) and width (7.49–12.25 mm). The chemical compositional data (i.e. fat, sucrose, protein, and 16 amino acids) were determined by conventional wet-chemical methods and showed large variation. Principal component analysis on the compositional data showed that peanuts with higher fat contents usually have higher hydrophobic amino acids contents, lower sucrose contents, and lower protein contents. The composition prediction models of single peanuts were estimated using partial least squares regression models that were integrated with different spectral pre-treatments and validated by external sets. The results showed that the prediction models have good performance with a correlation coefficient above 0.88 (calibration) and 0.83 (prediction) and a residual prediction deviation above 1.5 except for a few indicators. Overall, the portable near-infrared spectroscopy offered reliable methods to assess the major components and amino acids quantitatively in a single peanut, which will improve the raw material quality in the peanut industry through the simultaneous and short-term determination of multiple indicators.
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- 2020
12. Development of a Novel Membrane-less Microbial Fuel Cell (ML-MFC) with a Sandwiched Nitrifying Chamber for Efficient Wastewater Treatment
- Author
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Yue Bao, Lu Yin, Huixiang Shi, Simeng Zhao, Yuhong Zhou, and Jing Zhang
- Subjects
Denitrification ,Microbial fuel cell ,Chemistry ,02 engineering and technology ,010501 environmental sciences ,021001 nanoscience & nanotechnology ,Pulp and paper industry ,01 natural sciences ,Analytical Chemistry ,Membrane ,Electrochemistry ,Sewage treatment ,Nitrification ,0210 nano-technology ,0105 earth and related environmental sciences - Published
- 2018
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13. Identification of natural products as novel ligands for the human 5-HT2C receptor
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Ronald J. Quinn, Yueming Xu, Ling Shen, Jianjun Cheng, Zhi-Jie Liu, Simeng Zhao, Yao Peng, Xiaoyan Liu, Wenqing Shui, Guisheng Zhong, Jun Ma, Suwen Zhao, Haijie Cao, Raymond C. Stevens, and Yiran Wu
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5-HT2C receptor ,0301 basic medicine ,Natural product ,Subfamily ,Protein family ,General Medicine ,Computational biology ,03 medical and health sciences ,chemistry.chemical_compound ,GPCR ,Alkaloids ,030104 developmental biology ,0302 clinical medicine ,chemistry ,Structural biology ,Receptor ,030217 neurology & neurosurgery ,5-HT receptor ,Research Article ,G protein-coupled receptor - Abstract
G protein-coupled receptors (GPCRs) constitute the largest human protein family with over 800 members, which are implicated in many important medical conditions. Serotonin receptors belong to the aminergic GPCR subfamily and play important roles in physiological and psychological activities. Structural biology studies have revealed the structures of many GPCRs in atomic details and provide the basis for the identification and investigation of the potential ligands, which interact with and modulate the receptors. Here, an integrative approach combining a focused target-specific natural compound library, a thermal-shift-based screening method, affinity mass spectrometry, molecular docking, and in vitro as well as in vivo functional assay, was applied to identify (–)-crebanine and several other aporphine alkaloids as initial hits for a human serotonin receptor subtype, the 5-HT2C receptor. Further studies illuminated key features of their binding affinity, downstream signaling and tissue reaction, providing a molecular explanation for the interaction between (–)-crebanine and human 5-HT2C receptor.
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- 2018
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14. A novel G protein-biased and subtype selective agonist for a G protein-coupled receptor discovered from screening herbal extracts
- Author
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Simeng Zhao, Ye Xin, Yao Peng, Xiaoqing Cai, Yueming Xu, Ming-Wei Wang, Wen Sun, Dehua Yang, Na Ye, Bingjie Zhang, Zhi-Jie Liu, Xi Ping Huang, Yiran Wu, Wenqing Shui, Guisheng Zhong, Suwen Zhao, and Haijie Cao
- Subjects
Agonist ,G protein ,Drug discovery ,medicine.drug_class ,Chemistry ,Chemical space ,Lorcaserin ,chemistry.chemical_compound ,Biochemistry ,medicine ,Aporphine ,Receptor ,G protein-coupled receptor ,medicine.drug - Abstract
Subtype selectivity and functional bias are vital in current drug discovery for G protein-coupled receptors (GPCRs) as selective and biased ligands are expected to yield drug leads with optimal on-target benefits and minimal side-effects. However, structure-based design and medicinal chemistry exploration remain challenging in part because of highly conserved binding pockets within subfamilies. Herein, we present an affinity mass spectrometry approach for screening herbal extracts to identify active ligands of a GPCR, the 5-HT2C receptor. Using this method, we discovered a naturally occurring aporphine 1857 that displayed strong selectivity for activating 5-HT2C without activating the 5-HT2A or 5-HT2B receptors. Remarkably, this novel ligand exhibited exclusive bias towards G protein signaling for which key residues were identified, and it showed comparable in vivo efficacy for food intake suppression and weight loss as the anti-obesity drug, lorcaserin. Our study establishes an efficient approach to discovering novel GPCR ligands by exploring the largely untapped chemical space of natural products.
- Published
- 2019
- Full Text
- View/download PDF
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