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Exact pattern matching in labeled graphs is the problem of searching paths of a graph $G=(V,E)$ that spell the same string as the pattern $P[1..m]$. This basic problem can be found at the heart of more complex operations on variation graphs in computational biology, of query operations in graph databases, and of analysis operations in heterogeneous networks, where the nodes of some paths must match a sequence of labels or types. We describe a simple conditional lower bound that, for any constant $\epsilon>0$, an $O(|E|^{1 - \epsilon} \, m)$-time or an $O(|E| \, m^{1 - \epsilon})$-time algorithm for exact pattern matching on graphs, with node labels and patterns drawn from a binary alphabet, cannot be achieved unless the Strong Exponential Time Hypothesis (SETH) is false. The result holds even if restricted to undirected graphs of maximum degree three or directed acyclic graphs of maximum sum of indegree and outdegree three. Although a conditional lower bound of this kind can be somehow derived from previous results (Backurs and Indyk, FOCS'16), we give a direct reduction from SETH for dissemination purposes, as the result might interest researchers from several areas, such as computational biology, graph database, and graph mining, as mentioned before. Indeed, as approximate pattern matching on graphs can be solved in $O(|E|\,m)$ time, exact and approximate matching are thus equally hard (quadratic time) on graphs under the SETH assumption. In comparison, the same problems restricted to strings have linear time vs quadratic time solutions, respectively, where the latter ones have a matching SETH lower bound on computing the edit distance of two strings (Backurs and Indyk, STOC'15)., Comment: Using Lemma 12 and Lemma 13 might to be enough to prove Lemma 14. However, the proof of Lemma 14 is correct if you assume that the graph used in the reduction is a DAG. Hence, since the problem is already quadratic for a DAG and a binary alphabet, it has to be quadratic also for a general graph and a binary alphabet

This paper addresses the structurally constrained sparse decomposition of multi-dimensional signals onto overcomplete families of vectors, called dictionaries. The contribution of the paper is threefold. Firstly, a generic spatio-temporal regularization term is designed and used together with the standard ź 1 regularization term to enforce a sparse decomposition preserving the spatio-temporal structure of the signal. Secondly, an optimization algorithm based on the split Bregman approach is proposed to handle the associated optimization problem, and its convergence is analyzed. Our well-founded approach yields same accuracy as the other algorithms at the state of the art, with significant gains in terms of convergence speed. Thirdly, the empirical validation of the approach on artificial and real-world problems demonstrates the generality and effectiveness of the method. On artificial problems, the proposed regularization subsumes the Total Variation minimization and recovers the expected decomposition. On the real-world problem of electro-encephalography brainwave decomposition, the approach outperforms similar approaches in terms of P300 evoked potentials detection, using structured spatial priors to guide the decomposition. HighlightsA sparse structured decomposition method is proposed for multi-dimensional signals.Knowledge priors are encoded in a regularization to obtain plausible representations.The proposed split-Bregman based method outperforms counterparts in terms of speed.The approach is applied to EEG denoising for the extraction of P300 potentials.

Two mobile agents (robots) have to meet in an a priori unknown bounded terrain modeled as a polygon, possibly with polygonal obstacles. Agents are modeled as points, and each of them is equipped with a compass. Compasses of agents may be incoherent. Agents construct their routes, but the actual walk of each agent is decided by the adversary: the movement of the agent can be at arbitrary speed, the agent may sometimes stop or go back and forth, as long as the walk of the agent in each segment of its route is continuous, does not leave it and covers all of it. We consider several scenarios, depending on three factors: (1) obstacles in the terrain are present, or not, (2) compasses of both agents agree, or not, (3) agents have or do not have a map of the terrain with their positions marked. The cost of a rendezvous algorithm is the worst-case sum of lengths of the agents' trajectories until their meeting. For each scenario we design a deterministic rendezvous algorithm and analyze its cost. We also prove lower bounds on the cost of any deterministic rendezvous algorithm in each case. For all scenarios these bounds are tight.

International audience; A mobile robot represented by a point moving in the plane has to explore an unknown flat terrain with impassable obstacles. Both the terrain and the obstacles are modeled as arbitrary polygons. We consider two scenarios: the unlimited vision, when the robot situated at a point p of the terrain explores (sees) all points q of the terrain for which the segment pq belongs to the terrain, and the limited vision, when we require additionally that the distance between p and q be at most 1. All points of the terrain (except obstacles) have to be explored and the performance of an exploration algorithm, called its complexity, is measured by the length of the trajectory of the robot. For unlimited vision we show an exploration algorithm with complexity $O(P+D\sqrt{k})$, where P is the total perimeter of the terrain (including perimeters of obstacles), D is the diameter of the convex hull of the terrain, and k is the number of obstacles. We do not assume knowledge of these parameters. We also prove a matching lower bound showing that the above complexity is optimal, even if the terrain is known to the robot. For limited vision we show exploration algorithms with complexity $O(P+A+\sqrt{Ak})$, where A is the area of the terrain (excluding obstacles). Our algorithms work either for arbitrary terrains, if one of the parameters A or k is known, or for c-fat terrains, where c is any constant (unknown to the robot) and no additional knowledge is assumed. (A terrain ${\mathcal T}$ with obstacles is c-fat if R/r ≤ c, where R is the radius of the smallest disc containing ${\mathcal T}$ and r is the radius of the largest disc contained in ${\mathcal T}$.) We also prove a matching lower bound $\Omega(P+A+\sqrt{Ak})$ on the complexity of exploration for limited vision, even if the terrain is known to the robot.