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Apricot has a long history of cultivation and has many varieties and types. The traditional variety identification methods are timeconsuming and labor-consuming, posing grand challenges to apricot resource management. Tool development in this regard will help researchers quickly identify variety information. This study photographed apricot fruits outdoors and indoors and constructed a dataset that can precisely classify the fruits using a U-net model (F-score: 99%), which helps to obtain the fruit's size, shape, and color features. Meanwhile, a variety search engine was constructed, which can search and identify variety from the database according to the above features. Besides, a mobile and web application (ApricotView) was developed, and the construction mode can be also applied to other varieties of fruit trees. Additionally, we have collected four difficult-to-identify seed datasets and used the VGG16 model for training, with an accuracy of 97%, which provided an important basis for ApricotView. To address the difficulties in data collection bottlenecking apricot phenomics research, we developed the first apricot database platform of its kind (ApricotDIAP, http://apricotdiap.com/) to accumulate, manage, and publicize scientific data of apricot. [ABSTRACT FROM AUTHOR]

Protein fold recognition is critical for studying the structures and functions of proteins. The existing protein fold recognition approaches failed to efficiently calculate the pairwise sequence similarity scores of the proteins in the same fold sharing low sequence similarities. Furthermore, the existing feature vectorization strategies are not able to measure the global relationships among proteins from different protein folds. In this article, we proposed a new computational predictor called DeepSVM-fold for protein fold recognition by introducing a new feature vector based on the pairwise sequence similarity scores calculated from the fold-specific features extracted by deep learning networks. The feature vectors are then fed into a support vector machine to construct the predictor. Experimental results on the benchmark dataset (LE) show that DeepSVM-fold obviously outperforms all the other competing methods. [ABSTRACT FROM AUTHOR]

Monitoring pig drinking has been a topic of interest to pig researchers and producers for many years. However, challenges still remain due to the fact that pigs like to play with drinkers in nursery environments and that the drinking pig is often touching others. These factors negatively influence the performance of camera-based pig drinking detection algorithms. The aim of this study is to investigate a deep learning method based on convolutional neural network (CNN) and long short-term memory (LSTM) to classify drinking and drinker-playing. In the experiment, two pens of pigs were video recorded for 3 days. In video from the first pen, 5400 2 s drinking episodes and 5400 2 s drinker-playing episodes were generated with 80% of these data being allocated as training set and the remaining 20% as validation set. In video from the second pen, 12,000 2 s drinking and drinker-playing episodes were generated as a test set. Firstly, the CNN architecture ResNet50 was used to extract spatial features. These features were input into LSTM framework to extract spatial–temporal features. Through the fully connected layer, the prediction function Softmax was finally used to classify these drinking and drinker-playing episodes. In the test set, the classification accuracy in the body and head regions of interest was 87.2% and 92.5%, respectively. The results indicate that the proposed method can be used to classify pigs' drinking and drinker-playing. These classification results have potential to improve the accuracy of pig drinking detection and help farmers to estimate pig welfare. • A novel video-based deep learning method was used to study pig drinking behaviour. • Long short-term memory was used to extract the spatial–temporal features. • Classification accuracy in the body and head regions of interest was 87.2% and 92.5%. • Drinking behaviour can be detected under conditions of pigs touching and overlapping. • Shortening the region of interest can be used to improve the classification accuracy. [ABSTRACT FROM AUTHOR]

In zero-shot learning, attributes play as a bridge from original images to class labels. Therefore, to achieve accurate zero-shot image classification, we mainly focus on improving attribute prediction accuracy by taking full advantage of prior information about attribute from two aspects. First, we present a new attribute classifier called deep attribute prediction (DeepAP) model by using supervised deep convolutional neural networks (DCNNs), where the attribute label information participates in the training of DCNNs. Unlike common DCNNs that are usually used to extract image features, the constructed DCNNs are used to directly predict attribute values from the original input images. Thus, the designed DeepAP model can serve as the mapping from low-level image features to high-level semantic attributes in the traditional direct attribute prediction (DAP) model. Second, another prior information about attribute, i.e., class-attribute matrix is used to mine the attribute-class correlation with sparse representation coefficients. Since the attribute-class correlation can reflect different contributions of attributes to classification, we use it to define attribute weights and incorporate the idea of weighted attributes into DeepAP to form the deep weighted attribute prediction (DWAP) model. Experiments on three real datasets show that DWAP outperforms the deep attribute network and DAP on attribute prediction and zero-shot image classification. [ABSTRACT FROM AUTHOR]

Medical diagnosis technology based on convolutional neural networks (CNNs) has achieved good performance. In this study, we collected serum samples from 38 glioma patients and 45 healthy controls and used partial least squares (PLS) analysis to reduce the dimension of the data. Different levels of noise were added to the reduced data onto data augmentation, and the AlexNet, ResNet, and GoogLeNet fine‐tuning models were applied for classification. To evaluate the performance of the models, we used five‐fold cross‐validation. The accuracy rates of the AlexNet, ResNet, and GoogLeNet fine‐tuning models were 98.50%, 98.24%, and 99.50%, respectively. The model with the best classification effect was GoogLeNet. The specificity and sensitivity of this model were 98.98% and 98.48%, respectively. In addition, the area under the receiver operating characteristic (ROC) curve (AUC) of the established diagnostic model was 0.9949. The results showed that the combination of serum Raman spectroscopy and the PLS‐Gaussian‐GoogLeNet model achieved a good diagnostic effect for glioma. This method has high clinical application value and is worthy of further popularization. [ABSTRACT FROM AUTHOR]

Objective: For several years, computer technology has been utilized to diagnose lung nodules. When compared to traditional machine learning methods for image processing, deep-learning methods can improve the accuracy of lung nodule diagnosis by avoiding the laborious pre-processing step of the picture (extraction of fake features, etc.). Our goal is to investigate how well deep-learning approaches classify lung nodule malignancy. Method: We evaluated the performance of deep-learning methods on lung nodule malignancy classification via a systematic literature search. We conducted searches for appropriate articles in the PubMed and ISI Web of Science databases and chose those that employed deep learning to classify or predict lung nodule malignancy for our investigation. The figures were plotted, and the data were extracted using SAS version 9.4 and Microsoft Excel 2010, respectively. Results: Sixteen studies that met the criteria were included in this study. The articles classified or predicted pulmonary nodule malignancy using classification and summarization, using convolutional neural network (CNN), autoencoder (AE), and deep belief network (DBN). The AUC of deep-learning models is typically greater than 90% in articles. It demonstrated that deep learning performed well in the diagnosis and forecasting of lung nodules. Conclusion: It is a thorough analysis of the most recent advancements in lung nodule deep-learning technologies. The advancement of image processing techniques, traditional machine learning techniques, deep-learning techniques, and other techniques have all been applied to the technology for pulmonary nodule diagnosis. Although the deep-learning model has demonstrated distinct advantages in the detection of pulmonary nodules, it also carries significant drawbacks that warrant additional research. [ABSTRACT FROM AUTHOR]

• A deep learning method based on CNN and LSTM was used to recognise pig aggression. • This study directly process video episodes rather than individual frames. • CNN features were input into LSTM framework to extract spatial-temporal features. • The proposed method could recognise aggressive episodes with an accuracy of 97.2%. • A frame skipping approach can improve the accuracy to 98.4% and halve running time. Aggression is considered as a major animal welfare problem in commercial pig farming. The aim of this study is to develop a deep learning method based on convolutional neural network (CNN) and long short-term memory (LSTM) to recognise aggressive episodes of pigs. Compared to previous studies of pig behaviours based on deep learning, this study directly process video episodes rather than individual frames. In the experiment, nursery pigs (8/pen) were mixed for 3 days and then 8 h of video was recorded in each day. From these videos, 600 aggressive 2 s-episodes were manually selected and then augmented into 2400 episodes by using horizontal, vertical and diagonal mirroring. From the videos, 2400 non-aggressive 2 s-episodes were also manually selected. 80% of the data were randomly allocated as training set and the remaining 20% as validation set. Firstly, the CNN architecture VGG-16 was used to extract spatial features. These features were then input into LSTM framework to further extract temporal features. Through fully connected layer, the prediction function Softmax was finally used to determine if the current episode is aggression or non-aggression. Using the proposed method, aggressive episodes could be recognised with an accuracy of 97.2%. This result indicates that this method can be used to recognise aggressive episodes of pigs. Additionally, this paper further investigates the validity of this method under the conditions of skipping frames and reducing the episode length. The results show that a frame skipping approach whereby 30 fps is reduced into 15 fps within each 2 s-episode can improve the accuracy into 98.4% and halve the total running time. [ABSTRACT FROM AUTHOR]