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• Developing a two-step inference algorithm to solve the joint posterior distribution of model parameters and state variables in assimilating remote sensing into crop model. • The effectiveness of the proposed DA algorithm has been verified experimentally. • Introducing the uncertainties of model parameters quantified by MCMC and LAI observations quantified by GPR into the ensemble data assimilation method. Data assimilation techniques integrating crop growth models and remote sensing technologies offer a feasible approach for large-scale crop yield estimation. Previous research has primarily focused on either recalibrate the uncertain model parameters or updating model state variables independently using remotely sensed observations. In this study, we developed a two-step inference algorithm that couples the parameter inference and the state update, to solve the joint posterior distribution of uncertain parameters and state variables given the remote sensing observations. An Observing Simulation System (OSS) experiment was first performed based on the WOFOST crop model to validate the effectiveness of the parameter inference method. The results indicate that, the parameter inference method successfully improved the estimation of different types of model parameters and enhanced yield estimation. Furthermore, leaf area index (LAI) retrieved from Sentinel-2 was assimilated into the WOFOST model to simulate winter wheat yield at the plot scale in the northeastern part of Henan Province. The results demonstrated that the proposed two-step inference algorithm can more effectively correct model simulation biases and improve winter wheat yield estimation accuracy (R²=0.58, MAPE=12.75 %, and RMSE=1112 kg·ha⁻¹), outperforming the standard EnKF algorithm (R²=0.51, MAPE=14.62 %, RMSE=1328 kg·ha⁻¹). Overall, attributed to its unified approach to estimating both model parameters and state variables, the proposed two-step inference algorithm shows promising application prospects for data assimilation-based crop yield estimation. [ABSTRACT FROM AUTHOR]

Timely and accurate regional crop-yield estimates are crucial for guiding agronomic practices and policies to improve food security. In this study, a crop-growth model was integrated with time series of remotely sensed data through deep learning (DL) methods to improve the accuracy of regional wheat-yield estimations in Henan Province, China. Firstly, the time series of moderate-resolution imaging spectroradiometer (MODIS) normalized difference vegetation index (NDVI) were input into the long short-term memory network (LSTM) model to identify the wheat-growing region, which was further used to estimate wheat areas at the municipal and county levels. Then, the leaf area index (LAI) and grain-yield time series simulated by the Crop Environment REsource Synthesis for Wheat (CERES-Wheat) model were used to train and evaluate the LSTM, one-dimensional convolutional neural network (1-D CNN) and random forest (RF) models, respectively. Finally, an exponential model of the relationship between the field-measured LAI and MODIS NDVI was applied to obtain the regional LAI, which was input into the trained LSTM, 1-D CNN and RF models to estimate wheat yields within the wheat-growing region. The results showed that the linear correlations between the estimated wheat areas and the statistical areas were significant at both the municipal and county levels. The LSTM model provided more accurate estimates of wheat yields, with higher R2 values and lower root mean square error (RMSE) and mean relative error (MRE) values than the 1-D CNN and RF models. The LSTM model has an inherent advantage in capturing phenological information contained in the time series of the MODIS-derived LAI, which is important for satellite-based crop-yield estimates. [ABSTRACT FROM AUTHOR]

Predicting crop maturity dates is important for improving crop harvest planning and grain quality. The prediction of crop maturity dates by assimilating remote sensing information into crop growth model has not been fully explored. In this study, a data assimilation framework incorporating the leaf area index (LAI) product from Moderate Resolution Imaging Spectroradiometer (MODIS) into a World Food Studies (WOFOST) model was proposed to predict the maturity dates of winter wheat in Henan province, China. Minimization of normalized cost function was used to obtain the input parameters of the WOFOST model. The WOFOST model was run with the re-initialized parameter to forecast the maturity dates of winter wheat grid by grid, and THORPEX Interactive Grand Global Ensemble (TIGGE) was used as forecasting period weather input in the future 15 days (d) for the WOFOST model. The results demonstrated a promising regional maturity date prediction with determination coefficient (R2) of 0.94 and the root mean square error (RMSE) of 1.86 d. The outcomes also showed that the optimal forecasting starting time for Henan was 30 April, corresponding to a stage from anthesis to grain filling. Our study indicated great potential of using data assimilation approaches in winter wheat maturity date prediction. [ABSTRACT FROM AUTHOR]