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Your search keyword '"Kaminker, J."' showing total 2 results
Start Over Author "Kaminker, J." Topic databases, genetic
2 results on '"Kaminker, J."'

1. An integrated computational pipeline and database to support whole-genome sequence annotation.

Author

Mungall CJ, Misra S, Berman BP, Carlson J, Frise E, Harris N, Marshall B, Shu S, Kaminker JS, Prochnik SE, Smith CD, Smith E, Tupy JL, Wiel C, Rubin GM, and Lewis SE

Subjects
Animals, Humans, Internet, Computational Biology methods, Databases, Genetic, Genome, Software Design
Abstract

We describe here our experience in annotating the Drosophila melanogaster genome sequence, in the course of which we developed several new open-source software tools and a database schema to support large-scale genome annotation. We have developed these into an integrated and reusable software system for whole-genome annotation. The key contributions to overall annotation quality are the marshalling of high-quality sequences for alignments and the design of a system with an adaptable and expandable flexible architecture.

Published
2002
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2. An integrated computational pipeline and database to support whole-genome sequence annotation

Author

Mungall, C. J., Misra, S., Berman, B. P., Carlson, J., Frise, E., Harris, N., Marshall, B., Shu, S., Kaminker, J. S., Prochnik, S. E., Smith, C. D., Smith, E., Tupy, J. L., Wiel, C., Gerald Rubin, and Lewis, S. E.

Subjects
Internet, ComputingMethodologies_PATTERNRECOGNITION, Genome, Software Design, Databases, Genetic, Animals, Computational Biology, Humans, Software
Abstract

In the course of annotating the Drosophila melanogaster genome sequence, several new open-source software tools and a database schema to support large-scale genome annotation were developed and integrated in to a reusable software system for whole-genome annotation., We describe here our experience in annotating the Drosophila melanogaster genome sequence, in the course of which we developed several new open-source software tools and a database schema to support large-scale genome annotation. We have developed these into an integrated and reusable software system for whole-genome annotation. The key contributions to overall annotation quality are the marshalling of high-quality sequences for alignments and the design of a system with an adaptable and expandable flexible architecture.

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