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We present the development of a physically-based dust source map for the GOCART-AFWA dust module in WRF-Chem model. The new parameterization is based on MODIS-NDVI and an updated emission strength map is computed every 15 days from the latest satellite observations. Modeling simulations for the period April–May 2017 over the Mediterranean, north Africa, and the Middle East are compared with observations of AOD at 31 AERONET stations. The new module is capable of reproducing the dust sources at finer detail. The overall performance of the model is improved, especially for stronger dust episodes with AOD > 0.25. For this threshold the model BIAS decreases from −0.20 to −0.02, the RMSE from 0.38 to 0.30, the Correlation Coefficient improves from 0.21 to 0.47, the fractional gross error (FGE) from 0.62 to 0.40, and the mean fractional bias (MFB) from −0.49 to −0.08. Similar improvement is also found for the lower AOD thresholds (>0.0 and >0.1), especially for the stations in Europe, the Mediterranean, Sahel, the Middle East, and Arabian Peninsula, which are mostly affected by dust transport during the experimental period. An overprediction of AOD, compared to the original dust-source scheme, is found for some stations in the Sahara desert, the Atlantic Ocean, and the Iberian Peninsula. In total, 124 out of the 170 statistical scores that are calculated indicate improvement of model performance. [ABSTRACT FROM AUTHOR]