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Freshwater ecosystems face ever increasing environmental and ecological challenges. Recognition of those challenges is not new—over 30 years ago, a series of workshops convened to develop a research agenda (The Freshwater Imperative) to address those challenges. It was recognized that a critical component of solving the problems that freshwater ecosystems face would require greater interdisciplinary collaboration. Here, we discuss the context for the "Revisiting the Freshwater Imperative" workshop and describe how a small‐workshop model can be used effectively to seed longer term collaborative partnerships in support of meeting the challenges freshwater ecosystems face. Some key recommendations include: (1) engage with participants prior to the workshop to maximize efficient use of time and prime divergence‐convergence thinking; (2) promote a bottom‐up participant driven structure; (2) develop an agenda with enough flexibility to accommodate participant driven changes (i.e., a "live" agenda); (3) utilize best practices for facilitating team science; and (4) provide coordinating structure for post‐workshop working group activities. [ABSTRACT FROM AUTHOR]

Estuaries are among the most productive of aquatic ecosystems. Yet the collective understanding of patterns and drivers of primary production in estuaries is incomplete, in part due to complex hydrodynamics and multiple controlling factors that vary at a range of temporal and spatial scales. A whole-ecosystem experiment was conducted in a deep, pelagically dominated terminal channel of the Sacramento-San Joaquin Delta (California, USA) that seasonally appears to become nitrogen limited, to test whether adding calcium nitrate would stimulate primary productivity or increase phytoplankton density. Production did not respond consistently to fertilization, in part because nitrate and phytoplankton were dispersed away from the manipulated area within 1–3 days. Temporal and spatial patterns of gross primary production were more strongly related to stratification and light availability (i.e., turbidity) than nitrogen, highlighting the role of hydrodynamics in regulating system production. Similarly, chlorophyll was positively related not only to stratification but also to nitrogen—with a positive interaction—suggesting stratification may trigger nutrient limitation. The average rate of primary production (4.3 g O2 m−2 d−1), metabolic N demand (0.023 mg N L−1 d−1), and ambient dissolved inorganic nitrogen concentration (0.03 mg N L−1) indicate that nitrogen can become limiting in time and space, especially during episodic stratification events when phytoplankton are isolated within the photic zone, or farther upstream where water clarity increases, dispersive flux decreases, and stratification is stronger and more frequent. The role of hydrodynamics in organizing habitat connectivity and regulating physical and chemical processes at multiple temporal and spatial scales is critical for determining resource availability and evaluating biogeochemical processes in estuaries. [ABSTRACT FROM AUTHOR]

Ponds are often identified by their small size and shallow depths, but the lack of a universal evidence-based definition hampers science and weakens legal protection. Here, we compile existing pond definitions, compare ecosystem metrics (e.g., metabolism, nutrient concentrations, and gas fluxes) among ponds, wetlands, and lakes, and propose an evidence-based pond definition. Compiled definitions often mentioned surface area and depth, but were largely qualitative and variable. Government legislation rarely defined ponds, despite commonly using the term. Ponds, as defined in published studies, varied in origin and hydroperiod and were often distinct from lakes and wetlands in water chemistry. We also compared how ecosystem metrics related to three variables often seen in waterbody definitions: waterbody size, maximum depth, and emergent vegetation cover. Most ecosystem metrics (e.g., water chemistry, gas fluxes, and metabolism) exhibited nonlinear relationships with these variables, with average threshold changes at 3.7 ± 1.8 ha (median: 1.5 ha) in surface area, 5.8 ± 2.5 m (median: 5.2 m) in depth, and 13.4 ± 6.3% (median: 8.2%) emergent vegetation cover. We use this evidence and prior definitions to define ponds as waterbodies that are small (< 5 ha), shallow (< 5 m), with < 30% emergent vegetation and we highlight areas for further study near these boundaries. This definition will inform the science, policy, and management of globally abundant and ecologically significant pond ecosystems. [ABSTRACT FROM AUTHOR]

The impacts of wildfire smoke on lake habitats remains unclear. We determined the metabolic response to smoke in the epi‐pelagic and two littoral habitats in Castle Lake, California. We compared light regime, gross primary production, ecosystem respiration, and net ecosystem production in years with and without smoke. During the smoke period incident ultraviolet‐B (UV‐B) radiation and photosynthetically active radiation (PAR) decreased by 53% and 28%, respectively, while the water column extinction coefficient of UV‐B and PAR increased by 20% and 18% respectively. Epi‐pelagic productivity increased during smoke cover because of decreased solar inputs. PAR values remained sufficient to saturate productivity, suggesting observed differences were primarily the result of changes in UV‐B. Littoral‐benthic productivity did not change, possibly reflecting adaptation to high‐intensity UV‐B light in these habitats. Our results highlight the importance of understanding how prolonged wildfire smoke alters the amount of energy produced from specific habitats in lakes. Plain Language Summary: Large wildfires are increasing worldwide, but the impacts of wildfire smoke on lakes are unknown. We determined how photosynthetic activity and organism's respiration respond to smoke in the offshore and nearshore habitats in a mountain lake. Smoke limited the damage to algae caused by ultraviolet‐B radiation, resulting in increased offshore photosynthesis. Photosynthesis in the nearshore habitat did not change during smoke cover, possibly because organisms in shallow habitats have adapted to the higher intensity of damaging ultraviolet‐B radiation. Our results highlight the importance of understanding how prolonged smoke conditions can alter lakes' energy flows and food webs. Key Points: Wildfire smoke reduced ultraviolet‐B and photosynthetically active radiationLake habitats respond differently to changes in light from smoke, pelagic primary production increased with no change to littoral metabolismSmoke alters energy flows with implications for food web structure in lakes [ABSTRACT FROM AUTHOR]

Ecosystem metabolism is a key ecological attribute and easy to describe, but quantifying metabolism in estuaries is challenging. Properly scaling measurements through time and space requires consideration of hydrodynamics and mixing water from heterogeneous sources, making any estimation uncertain. Here, we compared three methods for modeling ecosystem metabolism in a portion of the Sacramento‐San Joaquin Delta. Metabolism estimates based on laboratory incubations, continuous in situ buoys, and an oxygen isotope approach all indicated the system was net heterotrophic, and calculated rates were comparable in magnitude when averaged over the 2‐month study. Daily metabolic rates based on in situ buoys were the most variable, likely due to horizontal and vertical advection and poor portrayal of the dissolved oxygen budget. After temporally averaging in situ buoy estimates or smoothing the dissolved oxygen time series for tidal effects, rates were more comparable to the other methods, which may be necessary to account for tidal advection and unbalanced contributions from subhabitats within the metabolic footprint. Incubation‐based rates represent the finest temporal and spatial scale and only account for pelagic processes, which may explain why incubation‐based rates were lower than the other two methods. The oxygen isotope method provided temporally and spatially integrated rates that were bracketed by the other two methods and may be a valuable tool in systems matching the model requirements. Because uncertainty arises in each method from a number of assumptions and scaling calculations, the resolution of metabolic rates in estuaries is likely coarser and more variable than in other aquatic ecosystems. [ABSTRACT FROM AUTHOR]

Scientific Significance Statement: Metabolic stoichiometry predicts that dissolved oxygen (O2) and carbon dioxide (CO2) in aquatic ecosystems should covary inversely; however, field observations often diverge from theoretical expectations. Here, we propose a suite of metrics describing this O2 and CO2 decoupling and introduce a conceptual framework for interpreting these metrics within aquatic ecosystems. Within this framework, we interpret cross‐system patterns of high‐frequency O2 and CO2 measurements in 11 northern lakes and extract emergent insights into the metabolic behavior and the simultaneous roles of chemical and physical forcing in shaping ecosystem processes. This approach leverages the power of high‐frequency paired O2–CO2 measurements, and yields a novel, integrative aquatic system typology which can also be applicable more broadly to streams and rivers, wetlands and marine systems. [ABSTRACT FROM AUTHOR]

We characterized the effect of an extreme rain event on the biogeochemistry and ecosystem metabolism of an oligotrophic Sierra Nevada (California) lake. During a 10 hour period of an autumn season rainfall event, lake discharge increased from <1.0 L s-1 to over 3000 L s-1, reaching a rate one order of magnitude higher than found during peak snow-tmelt. Large quantities of terrestrial particulate and dissolved organic matter were washed into the lake. An entire season of autochthonous dissolved organic carbon (DOC) was flushed and replaced by allochthonous DOC as light attenuation increased by >300%. The resulting truncation of the photic zone, reduction of water column chlorophyll- a, and increase in particulate and dissolved organic matter available to microbes resulted in a 47% reduction in whole lake gross primary production and 30% increase in respiration relative to average autumn values. As a consequence, the lake went from being slightly autotrophic to strongly heterotrophic. If rain events increase in frequency, as many climate change models predict, increased terrestrial inputs to Sierran lakes may result in more frequent periods of reduced primary production, increased periods of hypoxia and anoxia, and an ecosystem shift toward net heterotrophy during the ice-free season. [ABSTRACT FROM AUTHOR]