37 results on '"Epel, Boris"'
Search Results
2. SOX71, A Biocompatible Succinyl Derivative of the Triarylmethyl Radical OX071 for In Vivo Quantitative Oxygen Mapping Using Electron Paramagnetic Resonance.
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Shaw, Misa A., Poncelet, Martin, Viswakarma, Navin, Vallerini, Gian Paolo, Hameed, Safa, Gluth, Teresa D., Geldenhuys, Werner J., Hoblitzell, Emily H., Eubank, Timothy D., Epel, Boris, Kotecha, Mrignayani, and Driesschaert, Benoit
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ELECTRON paramagnetic resonance ,RADICALS (Chemistry) ,OXYGEN ,INTRAPERITONEAL injections ,TOXICITY testing - Abstract
Purpose: This study aimed to develop a biocompatible oximetric electron paramagnetic resonance (EPR) spin probe with reduced self-relaxation, and sensitivity to oxygen for a higher signal-to-noise ratio and longer relaxation times at high oxygen concentration, compared to the reference spin probe OX071. Procedures: SOX71 was synthesized by succinylation of the twelve alcohol groups of OX071 spin probe and characterized by EPR at X-Band (9.5 GHz) and at low field (720 MHz). The biocompatibility of SOX71 was tested in vitro and in vivo in mice. A pharmacokinetic study was performed to determine the best time frame for EPR imaging. Finally, a proof-of-concept EPR oxygen imaging was performed on a mouse model of a fibrosarcoma tumor. Results: SOX71 was synthesized in one step from OX071. SOX71 exhibits a narrow line EPR spectrum with a peak-to-peak linewidth of 66 mG, similar to OX071. SOX71 does not bind to albumin nor show cell toxicity for the concentrations tested up to 5 mM. No toxicity was observed after systemic delivery via intraperitoneal injection in mice at twice the dose required for EPR imaging. After the injection, the probe is readily absorbed into the bloodstream, with a peak blood concentration half an hour, post-injection. Then, the probe is quickly cleared by the kidney with a half-life of ~ 45 min. SOX71 shows long relaxation times under anoxic condition (T
1e = 9.5 µs and T2e = 5.1 µs; [SOX71] = 1 mM in PBS at 37 °C, pO2 = 0 mmHg, 720 MHz). Both the relaxation rates R1e and R2e show a decreased sensitivity to pO2, leading to twice longer relaxation times under room air conditions (pO2 = 159 mmHg) compared to OX071. This is ideal for oxygen imaging in samples with a wide range of pO2 . Both the relaxation rates R1e and R2e show a decreased sensitivity to self-relaxation compared to OX071, with a negligible effect of the probe concentration on R1e . SOX71 was successfully applied to image oxygen in a tumor. Conclusion: SOX71, a succinylated derivative of OX071 was synthesized, characterized, and applied for in vivo EPR tumor oxygen imaging. SOX71 is highly biocompatible, and shows decreased sensitivity to oxygen and self-relaxation. This first report suggests that SOX71 is superior to OX071 for absolute oxygen mapping under a broad range of pO2 values. [ABSTRACT FROM AUTHOR]- Published
- 2024
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3. Toward a Nanoencapsulated EPR Imaging Agent for Clinical Use.
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Martin, Rhia M., Diaz, Samantha, Poncelet, Martin, Driesschaert, Benoit, Barth, Eugene, Kotecha, Mrignayani, Epel, Boris, Eaton, Gareth R., and Biller, Joshua R.
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ELECTRON paramagnetic resonance ,ELECTRON paramagnetic resonance spectroscopy ,NANOPARTICLES ,MOLECULAR probes ,DIAGNOSTIC imaging ,ALUMINUM hydroxide ,RADIOTHERAPY safety - Abstract
Purpose: Progress toward developing a novel radiocontrast agent for determining pO
2 in tumors in a clinical setting is described. The imaging agent is designed for use with electron paramagnetic resonance imaging (EPRI), in which the collision of a paramagnetic probe molecule with molecular oxygen causes a spectroscopic change which can be calibrated to give the real oxygen concentration in the tumor tissue. Procedures: The imaging agent is based on a nanoscaffold of aluminum hydroxide (boehmite) with sizes from 100 to 200 nm, paramagnetic probe molecule, and encapsulation with a gas permeable, thin (10–20 nm) polymer layer to separate the imaging agent and body environment while still allowing O2 to interact with the paramagnetic probe. A specially designed deuterated Finland trityl (dFT) is covalently attached on the surface of the nanoparticle through 1,3-dipolar addition of the alkyne on the dFT with an azide on the surface of the nanoscaffold. This click-chemistry reaction affords 100% efficiency of the trityl attachment as followed by the complete disappearance of the azide peak in the infrared spectrum. The fully encapsulated, dFT-functionalized nanoparticle is referred to as RADI-Sense. Results: Side-by-side in vivo imaging comparisons made in a mouse model made between RADI-Sense and free paramagnetic probe (OX-071) showed oxygen sensitivity is retained and RADI-Sense can create 3D pO2 maps of solid tumors Conclusions: A novel encapsulated nanoparticle EPR imaging agent has been described which could be used in the future to bring EPR imaging for guidance of radiotherapy into clinical reality. [ABSTRACT FROM AUTHOR]- Published
- 2024
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4. Evaluating Tumor Hypoxia Radiosensitization Via Electron Paramagnetic Resonance Oxygen Imaging (EPROI).
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Rickard, Ashlyn G., Mowery, Yvonne M., Bassil, Alex, Rouse, Douglas C., Williams, Nerissa T., Charity, Theresa, Belloni, Rafaela, Crouch, Brian, Ramanujam, Nimmi, Stevenson, Daniel, Castillo, Rico, Blocker, Stephanie, Epel, Boris, Kotecha, Mrignayani, and Palmer, Gregory M.
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ELECTRON paramagnetic resonance ,P53 antioncogene ,HYPOXEMIA ,TUMOR growth ,SARCOMA ,REFLECTANCE spectroscopy ,DOSE-response relationship (Radiation) - Abstract
Purpose: Tumor hypoxia contributes to aggressive phenotypes and diminished therapeutic responses to radiation therapy (RT) with hypoxic tissue being 3-fold less radiosensitive than normoxic tissue. A major challenge in implementing hypoxic radiosensitizers is the lack of a high-resolution imaging modality that directly quantifies tissue-oxygen. The electron paramagnetic resonance oxygen-imager (EPROI) was used to quantify tumor oxygenation in two murine tumor models: E0771 syngeneic transplant breast cancers and primary p53/MCA soft tissue sarcomas, with the latter autochthonous model better recapitulating the tumor microenvironment in human malignancies. We hypothesized that tumor hypoxia differs between these models. We also aimed to quantify the absolute change in tumor hypoxia induced by the mitochondrial inhibitor papaverine (PPV) and its effect on RT response. Procedures: Tumor oxygenation was characterized in E0771 and primary p53/MCA sarcomas via EPROI, with the former model also being quantified indirectly via diffuse reflectance spectroscopy (DRS). After confirming PPV's effect on hypoxic fraction (via EPROI), we compared the effect of 0 versus 2 mg/kg PPV prior to 20 Gy on tumor growth delay and survival. Results: Hypoxic sarcomas were more radioresistant than normoxic sarcomas (p=0.0057, 2-way ANOVA), and high baseline hypoxic fraction was a significant (p=0.0063, Cox Regression Model) hazard in survivability regardless of treatment. Pre-treatment with PPV before RT did not radiosensitize tumors in the sarcoma or E0771 model. In the sarcoma model, EPROI successfully identified baseline hypoxic tumors. DRS quantification of total hemoglobin, saturated hemoglobin, changes in mitochondrial potential and glucose uptake showed no significant difference in E0771 tumors pre- and post-PPV. Conclusion: EPROI provides 3D high-resolution pO
2 quantification; EPR is better suited than DRS to characterize tumor hypoxia. PPV did not radiosensitize E0771 tumors nor p53/MCA sarcomas, which may be related to the complex pattern of vasculature in each tumor. Additionally, understanding model-dependent tumor hypoxia will provide a much-needed foundation for future therapeutic studies with hypoxic radiosensitizers. [ABSTRACT FROM AUTHOR]- Published
- 2024
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5. Assessment of blood-brain barrier leakage and brain oxygenation in Connexin-32 knockout mice with systemic neuroinflammation using pulse electron paramagnetic resonance imaging techniques.
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Epel, Boris, Viswakarma, Navin, Hameed, Safa, Freidin, Mona M., Abrams, Charles K., and Kotecha, Mrignayani
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ELECTRON paramagnetic resonance ,BLOOD-brain barrier ,KNOCKOUT mice ,ELECTRON spin echoes ,NEUROINFLAMMATION - Abstract
Purpose: The determination of blood-brain barrier (BBB) integrity and partial pressure of oxygen (pO2) in the brain is of substantial interest in several neurological applications. This study aimed to assess the feasibility of using trityl OX071-based pulse electron paramagnetic resonance imaging (pEPRI) to provide a quantitative estimate of BBB integrity and pO2 maps in mouse brains as a function of neuroinflammatory disease progression. Methods: Five Connexin-32 (Cx32)-knockout (KO) mice were injected with lipopolysaccharide to induce neuroinflammation for imaging. Three wild-type mice were also used to optimize the imaging procedure and as control animals. An additional seven Cx32-KO mice were used to establish the BBB leakage of trityl using the colorimetric assay. All pEPRI experiments were performed using a preclinical instrument, JIVA-25 (25mT/720 MHz), at times t =0, 4, and 6 h following lipopolysaccharide injection. Two pEPRI imaging techniques were used: (a) single-point imaging for obtaining spatial maps to outline the brain and calculate BBB leakage using the signal amplitude, and (b) inversion-recovery electron spin echo for obtaining pO2 maps. Results: A statistically significant change in BBB leakage was found using pEPRI with the progression of inflammation in Cx32 KO animals. However, the change in pO2 values with the progression of inflammation for these animals was not statistically significant. Conclusions: For the first time, we show the ability of pEPRI to provide pO2 maps in mouse brains noninvasively, along with a quantitative assessment of BBB leakage. We expect this study to open new queries from the field to explore the pathology of many neurological diseases and provide a path to new treatments. [ABSTRACT FROM AUTHOR]
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- 2024
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6. Direct Measurement and Imaging of Redox Status with Electron Paramagnetic Resonance.
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Epel, Boris, Kao, Joseph P. Y., Eaton, Sandra S., Eaton, Gareth R., and Halpern, Howard J.
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ELECTRON paramagnetic resonance , *ELECTRON paramagnetic resonance spectroscopy , *OXIDATION-reduction reaction , *MOLECULAR probes , *SPECTRAL imaging , *OXIDATIVE stress - Abstract
Significance: Fundamental to the application of tissue redox status to human health is the quantification and localization of tissue redox abnormalities and oxidative stress and their correlation with the severity and local extent of disease to inform therapy. The centrality of the low-molecular-weight thiol, glutathione, in physiological redox balance has long been appreciated, but direct measurement of tissue thiol status in vivo has not been possible hitherto. Recent advances in instrumentation and molecular probes suggest the feasibility of real-time redox assessment in humans. Recent Advances: Recent studies have demonstrated the feasibility of using low-frequency electron paramagnetic resonance (EPR) techniques for quantitative imaging of redox status in mammalian tissues in vivo. Rapid-scan (RS) EPR spectroscopy and imaging, new disulfide–dinitroxide spin probes, and novel analytic techniques have led to significant advances in direct, quantitative imaging of thiol redox status. Critical Issues: While novel RS EPR imaging coupled with first-generation molecular probes has demonstrated the feasibility of imaging thiol redox status in vivo, further technical advancements are desirable and ongoing. These include developing spin probes that are tailored for specific tissues with response kinetics tuned to the physiological environment. Equally critical are RS instrumentation with higher signal-to-noise ratio and minimal signal distortion, as well as optimized imaging protocols for image acquisition with sparsity adapted to image information content. Future Directions: Quantitative images of tissue glutathione promise to enable acquisition of a general image of mammalian and potentially human tissue health. [ABSTRACT FROM AUTHOR]
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- 2024
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7. Electron Paramagnetic Resonance pO2 Image Tumor Oxygen-Guided Radiation Therapy Optimization
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Epel, Boris, Maggio, Matt, Pelizzari, Charles, Halpern, Howard J., COHEN, IRUN R., Series editor, LAJTHA, ABEL, Series editor, LAMBRIS, JOHN D., Series editor, PAOLETTI, RODOLFO, Series editor, Halpern, Howard J., editor, LaManna, Joseph C., editor, Harrison, David K., editor, and Epel, Boris, editor
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- 2017
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8. In vitro oxygen imaging of acellular and cell-loaded beta cell replacement devices.
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Kotecha, Mrignayani, Wang, Longhai, Hameed, Safa, Viswakarma, Navin, Ma, Minglin, Stabler, Cherie, Hoesli, Corinne A., and Epel, Boris
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PANCREATIC beta cells ,ISLANDS of Langerhans ,ELECTRON paramagnetic resonance ,TYPE 1 diabetes ,DIABETES in children ,SPIN-lattice relaxation ,CELL transplantation ,POLYMERSOMES - Abstract
Type 1 diabetes (T1D) is an autoimmune disease that leads to the loss of insulin-producing beta cells. Bioartificial pancreas (BAP) or beta cell replacement strategies have shown promise in curing T1D and providing long-term insulin independence. Hypoxia (low oxygen concentration) that may occur in the BAP devices due to cell oxygen consumption at the early stages after implantation damages the cells, in addition to imposing limitations to device dimensions when translating promising results from rodents to humans. Finding ways to provide cells with sufficient oxygenation remains the major challenge in realizing BAP devices' full potential. Therefore, in vitro oxygen imaging assessment of BAP devices is crucial for predicting the devices' in vivo efficiency. Electron paramagnetic resonance oxygen imaging (EPROI, also known as electron MRI or eMRI) is a unique imaging technique that delivers absolute partial pressure of oxygen (pO
2 ) maps and has been used for cancer hypoxia research for decades. However, its applicability for assessing BAP devices has not been explored. EPROI utilizes low magnetic fields in the mT range, static gradients, and the linear relationship between the spin–lattice relaxation rate (R1 ) of oxygen-sensitive spin probes such as trityl OX071 and pO2 to generate oxygen maps in tissues. With the support of the Juvenile Diabetes Research Foundation (JDRF), an academic-industry partnership consortium, the "Oxygen Measurement Core" was established at O2M to perform oxygen imaging assessment of BAP devices originated from core members' laboratories. This article aims to establish the protocols and demonstrate a few examples of in vitro oxygen imaging of BAP devices using EPROI. All pO2 measurements were performed using a recently introduced 720 MHz/25 mT preclinical oxygen imager instrument, JIVA-25™. We began by performing pO2 calibration of the biomaterials used in BAPs at 25 mT magnetic field since no such data exist. We compared the EPROI pO2 measurement with a single-point probe for a few selected materials. We also performed trityl OX071 toxicity studies with fibroblasts, as well as insulin-producing cells (beta TC6, MIN6, and human islet cells). Finally, we performed proof-of-concept in vitro pO2 imaging of five BAP devices that varied in size, shape, and biomaterials. We demonstrated that EPROI is compatible with commonly used biomaterials and that trityl OX071 is nontoxic to cells. A comparison of the EPROI with a fluorescent-based point oxygen probe in selected biomaterials showed higher accuracy of EPROI. The imaging of typically heterogenous BAP devices demonstrated the utility of obtaining oxygen maps over single-point measurements. In summary, we present EPROI as a quality control tool for developing efficient cell transplantation devices and artificial tissue grafts. Although the focus of this work is encapsulation systems for diabetes, the techniques developed in this project are easily transferable to other biomaterials, tissue grafts, and cell therapy devices used in the field of tissue engineering and regenerative medicine (TERM). In summary, EPROI is a unique noninvasive tool to experimentally study oxygen distribution in cell transplantation devices and artificial tissues, which can revolutionize the treatment of degenerative diseases like T1D. [ABSTRACT FROM AUTHOR]- Published
- 2023
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9. Radiation Oxygen Biology with Pulse Electron Paramagnetic Resonance Imaging in Animal Tumors
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Redler, Gage, Elas, Martyna, Epel, Boris, Barth, Eugene D., Halpern, Howard J., Cohen, Irun R., Series Editor, Lajtha, Abel, Series Editor, Paoletti, Rodolfo, Series Editor, Lambris, John D., Series Editor, Van Huffel, Sabine, editor, Naulaers, Gunnar, editor, Caicedo, Alexander, editor, Bruley, Duane F., editor, and Harrison, David K., editor
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- 2013
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10. Amniotic growth factors enhanced human pre‐adipocyte cell viability and differentiation under hypoxia.
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Magana, Alejandro, Giovanni, Regina, Essien, Edidiong, Epel, Boris, Kotecha, Mrignayani, Liu, Songyun, Mathew, Mathew T., Hagarty, Sarah E., and Bijukumar, Divya
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GROWTH factors ,CELL survival ,CELL differentiation ,ELECTRON paramagnetic resonance ,STAINS & staining (Microscopy) ,PLACENTAL growth factor ,HYDROXYCINNAMIC acids - Abstract
One of the major drawbacks associated with autologous fat grafting is unpredictable graft retention. Various efforts to improve the survivability of these cells have been explored, but these methods are time‐consuming, complex, and demand significant technical skill. In our study, we examine the use of cryopreserved amniotic membrane as a source of exogenous growth factors to improve adipocyte survivability under normal and hypoxic conditions. Human primary preadipocytes were cultured in a gelatin‐ferulic acid (Gtn‐FA) hydrogel with variable oxygen concentration and treated with amniotic membrane‐derived condition medium (CM) for 7 days. This hydrogel provides a hypoxic environment and also creates a 3D cell culture to better mimic recipient site conditions. The O2 concentration in the hydrogel was measured by electron paramagnetic resonance oxygen imaging (EPROI). The conjugation of FA was confirmed by FTIR and NMR spectroscopy. The cell viability and adipocyte differentiation were analyzed by alamarBlue™ assay, Oil Red O staining, and RT‐qPCR. The expression of genes: Pref‐1, C/EBP β, C/EBP α, PPAR‐ƴ, SLC2A4, and VEGF‐A were quantified. The cell viability results show that the 50% CM showed significantly higher cell pre‐adipocyte cell viability. In addition, compared to normal conditions, hypoxia/CM provided higher PPAR‐ƴ (p <.05), SLC2A4, and VEGF‐A (p <.05) (early and terminal differentiating markers) mRNA expression. This finding demonstrates the efficacy of amniotic CM supplementation as a novel way to promote adipocyte survival and retention via the expression of key gene markers for differentiation and angiogenesis. [ABSTRACT FROM AUTHOR]
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- 2022
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11. Multifrequency EPR analysis of the dimanganese cluster of the putative sulfate thiohydrolase SoxB of Paracoccus pantotrophus
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Epel, Boris, Schäfer, Kai-Oliver, Quentmeier, Armin, Friedrich, Cornelius, and Lubitz, Wolfgang
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- 2005
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12. Accurate reconstruction of 4D spectral–spatial images from sparse-view data in continuous-wave EPRI.
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Zhang, Zheng, Epel, Boris, Chen, Buxin, Xia, Dan, Sidky, Emil Y., Halpern, Howard, and Pan, Xiaochuan
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ELECTRON paramagnetic resonance , *IMAGE reconstruction - Abstract
In continuous-wave electron paramagnetic resonance imaging (CW EPRI), data are collected generally at densely sampled views sufficient for achieving accurate reconstruction of a four dimensional spectral–spatial (4DSS) image by use of the conventional filtered-backprojection (FBP) algorithm. It is desirable to minimize the scan time by collection of data only at sparsely sampled views, referred to as sparse-view data. Interest thus remains in investigation of algorithms for accurate reconstruction of 4DSS images from sparse-view data collected for potentially enabling fast data acquisition in CW EPRI. In this study, we investigate and demonstrate optimization-based algorithms for accurate reconstruction of 4DSS images from sparse-view data. Numerical studies using simulated and real sparse-view data acquired in CW EPRI are conducted that reveal, in terms of image visualization and physical-parameter estimation, the potential of the algorithms developed for yielding accurate 4DSS images from sparse-view data in CW EPRI. The algorithms developed may be exploited for enabling sparse-view scans with minimized scan time in CW EPRI for yielding 4DSS images of quality comparable to, or better than, that of the FBP reconstruction from data collected at densely sampled views. [Display omitted] • Investigating sparse-view scans in continuous-wave (CW) EPRI with Zeeman modulation. • Developing TV and DTV algorithms for accurate sparse-view image reconstruction. • Validating TV and DTV reconstructions for sparse-view CW EPRI in numerical studies. • Demonstrating quantitatively improved quality in TV and DTV reconstructions. • Providing insights for the design and optimization of fast scans in CW EPRI. [ABSTRACT FROM AUTHOR]
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- 2024
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13. A Doubly Constrained TV Algorithm for Image Reconstruction.
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Qiao, Zhiwei, Redler, Gage, Epel, Boris, and Halpern, Howard
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IMAGE reconstruction algorithms ,POSITRON emission tomography ,ELECTRON paramagnetic resonance ,MAGNETIC resonance imaging ,COMPUTED tomography - Abstract
Purpose. The total variation (TV) minimization algorithm is an effective image reconstruction algorithm capable of accurately reconstructing images from sparse and/or noisy data. The TV model consists of two terms: a data fidelity term and a TV regularization term. Two constrained TV models, data divergence-constrained TV minimization (DDcTV) and TV-constrained data divergence minimization (TVcDM), have been successfully applied to computed tomography (CT) and electron paramagnetic resonance imaging (EPRI). In this work, we propose a new constrained TV model, a doubly constrained TV (dcTV) model, which has the potential to further improve the reconstruction accuracy for the two terms which are both of constraint forms. Methods. We perform an inverse crime study to validate the model and its Chambolle-Pock (CP) solver and characterize the performance of the dcTV-CP algorithm in the context of CT. To demonstrate the superiority of the dcTV model, we compare the convergence rate and the reconstruction accuracy with the DDcTV and TVcDM models via simulated data. Results and Conclusions. The performance-characterizing study shows that the dcTV-CP algorithm is an accurate and convergent algorithm, with the model parameters impacting the reconstruction accuracy and the algorithm parameters impacting the convergence path and rate. The comparison studies show that the dcTV-CP algorithm has a relatively fast convergence rate and can achieve higher reconstruction accuracy from sparse projections or noisy projections relative to the other two single-constrained TV models. The knowledge and insights gained in the work may be utilized in the application of the new model in other imaging modalities including divergence-beam CT, magnetic resonance imaging (MRI), positron emission tomography (PET), and EPRI. [ABSTRACT FROM AUTHOR]
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- 2020
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14. A triple resonance hyperfine sublevel correlation experiment for assignment of electron-nuclear double resonance lines.
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Potapov, Alexey, Epel, Boris, and Goldfarb, Daniella
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ELECTRON paramagnetic resonance , *NUCLEAR magnetic resonance , *HYPERFINE structure , *HYPERFINE interactions , *MAGNETIC coupling , *PARTICLES (Nuclear physics) - Abstract
A new, triple resonance, pulse electron paramagnetic resonance (EPR) sequence is described. It provides spin links between forbidden electron spin transitions (ΔMS=±1, ΔMI≠0) and allowed nuclear spin transitions (ΔMI=±1), thus, facilitating the assignment of nuclear frequencies to their respective electron spin manifolds and paramagnetic centers. It also yields the relative signs of the hyperfine couplings of the different nuclei. The technique is based on the combination of electron-nuclear double resonance (ENDOR) and electron-electron double resonance (ELDOR)–detected NMR experiments in a way similar to the TRIPLE experiment. The feasibility and the information content of the method are demonstrated first on a single crystal of Cu-doped L-histidine and then on a frozen solution of a Cu-histidine complex. [ABSTRACT FROM AUTHOR]
- Published
- 2008
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15. Oxygen-Guided Radiation Therapy.
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Epel, Boris, Maggio, Matthew C., Barth, Eugene D., Miller, Richard C., Pelizzari, Charles A., Krzykawska-Serda, Martyna, Sundramoorthy, Subramanian V., Aydogan, Bulent, Weichselbaum, Ralph R., Tormyshev, Victor M., and Halpern, Howard J.
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RADIOTHERAPY , *RADIATION , *ELECTRON paramagnetic resonance - Abstract
Purpose: It has been known for over 100 years that tumor hypoxia, a near-universal characteristic of solid tumors, decreases the curative effectiveness of radiation therapy. However, to date, there are no reports that demonstrate an improvement in radiation effectiveness in a mammalian tumor on the basis of tumor hypoxia localization and local hypoxia treatment.Methods and Materials: For radiation targeting of hypoxic subregions in mouse fibrosarcoma, we used oxygen images obtained using pulse electron paramagnetic resonance pO2 imaging combined with 3D-printed radiation blocks. This achieved conformal radiation delivery to all hypoxic areas in FSa fibrosarcomas in mice.Results: We demonstrate that treatment delivering a radiation boost to hypoxic volumes has a significant (P = .04) doubling of tumor control relative to boosts to well-oxygenated volumes. Additional dose to well-oxygenated tumor regions minimally increases tumor control beyond the 15% control dose to the entire tumor. If we can identify portions of the tumor that are more resistant to radiation, it might be possible to reduce the dose to more sensitive tumor volumes without significant compromise in tumor control.Conclusions: This work demonstrates in a single, intact mammalian tumor type that tumor hypoxia is a local tumor phenomenon whose treatment can be enhanced by local radiation. Despite enormous clinical effort to overcome hypoxic radiation resistance, to our knowledge this is the first such demonstration, even in preclinical models, of targeting additional radiation to hypoxic tumor to improve the therapeutic ratio. [ABSTRACT FROM AUTHOR]- Published
- 2019
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16. Investigation of the preconditioner-parameter in the preconditioned Chambolle-Pock algorithm applied to optimization-based image reconstruction.
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Qiao, Zhiwei, Redler, Gage, Qian, Yuhua, Tang, Shaojie, Epel, Boris, and Halpern, Howard
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IMAGE reconstruction ,COMPUTED tomography ,ELECTRON paramagnetic resonance ,CONVEX programming ,ALGORITHMS - Abstract
The optimization-based image reconstruction methods have been thoroughly investigated in the field of medical imaging. The Chambolle-Pock (CP) algorithm may be employed to solve these convex optimization image reconstruction programs. The preconditioned CP (PCP) algorithm has been shown to have much higher convergence rate than the ordinary CP (OCP) algorithm. This algorithm utilizes a preconditioner-parameter to tune the implementation of the algorithm to the specific application, which ranges from 0 and 2, but is often set to 1. In this work, we investigated the impact of the preconditioner-parameter on the convergence rate of the PCP algorithm when it is applied to the TV constrained, data-divergence minimization (TVDM) optimization based image reconstruction. We performed the investigations in the context of 2D computed tomography (CT) and 3D electron paramagnetic resonance imaging (EPRI). For 2D CT, we used the Shepp-Logan and two FORBILD phantoms. For 3D EPRI, we used a simulated 6-spheres phantom and a physical phantom. Study results showed that the optimal preconditioner-parameter depends on the specific imaging conditions. Simply setting the parameter equal to 1 cannot guarantee a fast convergence rate. Thus, this study suggests that one should adaptively tune the preconditioner-parameter to obtain the optimal convergence rate of the PCP algorithm. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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17. Three novel accurate pixel-driven projection methods for 2D CT and 3D EPR imaging.
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Qiao, Zhiwei, Redler, Gage, Gui, Zhiguo, Qian, Yuhua, Epel, Boris, and Halpern, Howard
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IMAGE processing ,IMAGE reconstruction ,THREE-dimensional imaging ,IMAGING systems ,ELECTRON paramagnetic resonance ,ELECTRON paramagnetic resonance imaging ,COMPUTED tomography - Abstract
OBJECTIVES: This work aims to explore more accurate pixel-driven projection methods for iterative image reconstructions in order to reduce high-frequency artifacts in the generated projection image. METHODS: Three new pixel-driven projection methods namely, small-pixel-large-detector (SPLD), linear interpolation based (LIB) and distance anterpolation based (DAB), were proposed and applied to reconstruct images. The performance of these methods was evaluated in both two-dimensional (2D) computed tomography (CT) images via the modified FORBILD phantom and three-dimensional (3D) electron paramagnetic resonance (EPR) images via the 6-spheres phantom. Specifically, two evaluations based on projection generation and image reconstruction were performed. For projection generation, evaluation was using a 2D disc phantom, the modified FORBILD phantom and the 6-spheres phantom. For image reconstruction, evaluations were performed using the FORBILD and 6-spheres phantom. During evaluation, 2 quantitative indices of root-mean-square-error (RMSE) and contrast-to-noise-ratio (CNR) were used. RESULTS: Comparing to the use of ordinary pixel-driven projection method, RMSE of the SPLD based least-square algorithm was reduced from 0.0701 to 0.0384 and CNR was increased from 5.6 to 19.47 for 2D FORBILD phantom reconstruction. For 3D EPRI, RMSE of SPLD was also reduced from 0.0594 to 0.0498 and CNR was increased from 3.88 to 11.58. In addition, visual evaluation showed that images reconstructed in both 2D and 3D images suffered from high-frequency line-shape artifacts when using the ordinary pixel-driven projection method. However, using 3 new methods all suppressed the artifacts significantly and yielded more accurate reconstructions. CONCLUSIONS: Three proposed pixel-driven projection methods achieved more accurate iterative image reconstruction results. These new and more accurate methods can also be easily extended to other imaging modalities. Among them, SPLD method should be recommended to 3D and four dimensional (4D) EPR imaging. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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18. 4D-image reconstruction directly from limited-angular-range data in continuous-wave electron paramagnetic resonance imaging.
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Zhang, Zheng, Epel, Boris, Chen, Buxin, Xia, Dan, Sidky, Emil Y., Qiao, Zhiwei, Halpern, Howard, and Pan, Xiaochuan
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ELECTRON paramagnetic resonance , *IMAGE reconstruction , *IMAGE reconstruction algorithms , *CONSTRAINED optimization , *OPTIMAL designs (Statistics) , *QUANTITATIVE research - Abstract
[Display omitted] • Significance of limited-angular-range (LAR) scans in continuous-wave (CW) EPRI with Zeeman modulation (ZM). • DTV algorithm developed for accurate image reconstructions from LAR data in CW-ZM EPRI. • Quantitative studies for validation and characterization of the DTV algorithms. • Improved reconstruction quality of the DTV algorithms over existing algorithms. • Exploitation of the DTV algorithm for optimal design of scanning schemes in CW-ZM EPRI. Objective : We investigate and develop optimization-based algorithms for accurate reconstruction of four-dimensional (4D)-spectral-spatial (SS) images directly from data collected over limited angular ranges (LARs) in continuous-wave (CW) electron paramagnetic resonance imaging (EPRI). Methods : Basing on a discrete-to-discrete data model devised in CW EPRI employing the Zeeman-modulation (ZM) scheme for data acquisition, we first formulate the image reconstruction problem as a convex, constrained optimization program that includes a data fidelity term and also constraints on the individual directional total variations (DTVs) of the 4D-SS image. Subsequently, we develop a primal–dual-based DTV algorithm, simply referred to as the DTV algorithm, to solve the constrained optimization program for achieving image reconstruction from data collected in LAR scans in CW-ZM EPRI. Results : We evaluate the DTV algorithm in simulated- and real-data studies for a variety of LAR scans of interest in CW-ZM EPRI, and visual and quantitative results of the studies reveal that 4D-SS images can be reconstructed directly from LAR data, which are visually and quantitatively comparable to those obtained from data acquired in the standard, full-angular-range (FAR) scan in CW-ZM EPRI. Conclusion : An optimization-based DTV algorithm is developed for accurately reconstructing 4D-SS images directly from LAR data in CW-ZM EPRI. Future work includes the development and application of the optimization-based DTV algorithm for reconstructions of 4D-SS images from FAR and LAR data acquired in CW EPRI employing schemes other than the ZM scheme. Significance : The DTV algorithm developed may be exploited potentially for enabling and optimizing CW EPRI with minimized imaging time and artifacts by acquiring data in LAR scans. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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19. Triarylmethyl Radical: EPR Signal to Noise at Frequencies between 250 MHz and 1.5 GHz and Dependence of Relaxation on Radical and Salt Concentration and on Frequency.
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Shi, Yilin, Buchanan, Laura, Eaton, Sandra S., Eaton, Gareth R., Quine, Richard W., Rinard, George A., Epel, Boris, Seagle, Simone Wanless, and Halpern, Howard J.
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ELECTRON spin ,IN vivo studies ,ELECTRON paramagnetic resonance - Abstract
In vivo oximetry by pulsed electron paramagnetic resonance is based on measurements of changes in electron spin relaxation rates of probe molecules, such as the triarylmethyl radicals. A series of experiments was performed at frequencies between 250 MHz and 1.5 GHz to assist in the selection of an optimum frequency for oximetry. Electron spin relaxation rates for the triarylmethyl radical OX063 as a function of radical concentration, salt concentration, and resonance frequency were measured by electron spin echo 2-pulse decay and 3-pulse inversion recovery in the frequency range of 250 MHz-1.5 GHz. At constant OX063 concentration, 1/T
1 decreases with increasing frequency because the tumbling dependent processes that dominate relaxation at 250 MHz are less effective at higher frequency. 1/T2 also decreases with increasing frequency because 1/T1 is a significant contribution to 1/T2 for trityl radicals in fluid solution. 1/T2 -1/T1 , the incomplete motional averaging contribution to 1/T2 , increases with increasing frequency. At constant frequency, relaxation rates increase with increasing radical concentration due to contributions from collisions that are more effective for 1/T2 than 1/T1 . The collisional contribution to relaxation increases as the concentration of counter-ions in solution increases, which is attributed to interactions of cations with the negatively charged radicals that decrease repulsion between trityl radicals. The Signal-to-Noise ratio (S/N) of field-swept echo-detected spectra of OX063 were measured in the frequency range of 400 MHz-1 GHz. S/N values, normalized by √Q, increase as frequency increases. Adding salt to the radical solution decreased S/N because salt lowers the resonator Q. Changing the temperature from 19 to 37°C caused little change in S/N at 700 MHz. Both slower relaxation rates and higher S/N at higher frequencies are advantageous for oximetry. The potential disadvantage of higher frequencies is the decreased depth of penetration into tissue. [ABSTRACT FROM AUTHOR]- Published
- 2017
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20. Imaging thiol redox status in murine tumors in vivo with rapid-scan electron paramagnetic resonance.
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Epel, Boris, Sundramoorthy, Subramanian V., Krzykawska-Serda, Martyna, Maggio, Matthew C., Tseytlin, Mark, Eaton, Gareth R., Eaton, Sandra S., Rosen, Gerald M., P.Y. Kao, Joseph, and Halpern, Howard J.
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ELECTRON paramagnetic resonance , *SIGNAL-to-noise ratio , *THIOLS , *GLUTATHIONE , *LABORATORY mice - Abstract
Thiol redox status is an important physiologic parameter that affects the success or failure of cancer treatment. Rapid scan electron paramagnetic resonance (RS EPR) is a novel technique that has shown higher signal-to-noise ratio than conventional continuous-wave EPR in in vitro studies. Here we used RS EPR to acquire rapid three-dimensional images of the thiol redox status of tumors in living mice. This work presents, for the first time, in vivo RS EPR images of the kinetics of the reaction of 2 H, 15 N-substituted disulfide-linked dinitroxide (PxSSPx) spin probe with intracellular glutathione. The cleavage rate is proportional to the intracellular glutathione concentration. Feasibility was demonstrated in a FSa fibrosarcoma tumor model in C3H mice. Similar to other in vivo and cell model studies, decreasing intracellular glutathione concentration by treating mice with l -buthionine sulfoximine (BSO) markedly altered the kinetic images. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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21. Where it's at really matters: in situ in vivo vascular endothelial growth factor spatially correlates with electron paramagnetic resonance pO2 images in tumors of living mice.
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Elas, Martyna, Hleihel, Danielle, Barth, Eugene, Haney, Chad, Ahn, Kang-Hyun, Pelizzari, Charles, Epel, Boris, Weichselbaum, Ralph, Halpern, Howard, Barth, Eugene D, Haney, Chad R, Pelizzari, Charles A, Weichselbaum, Ralph R, and Halpern, Howard J
- Subjects
VASCULAR endothelial growth factors ,ELECTRON paramagnetic resonance ,IMAGE-guided radiation therapy ,HYPOXEMIA ,TUMORS ,CANCER pathophysiology ,OXYGEN metabolism ,ANIMAL experimentation ,CELL physiology ,COMPARATIVE studies ,DIAGNOSTIC imaging ,RESEARCH methodology ,MEDICAL cooperation ,MICE ,NUCLEAR magnetic resonance spectroscopy ,RESEARCH ,EVALUATION research ,PARTIAL pressure - Abstract
Purpose: Tumor microenvironments show remarkable tumor pO(2) heterogeneity, as seen in prior EPR pO(2) images (EPROI). pO(2) correlation with hypoxia response proteins is frustrated by large rapid pO(2) changes with position.Procedures: To overcome this limitation, biopsies stereotactically located in the EPROI were used to explore the relationship between vascular endothelial growth factor A (VEGF) concentrations in living mouse tumors and the local EPROI pO(2).Results: Quantitative ELISA VEGF concentrations correlated (p = 0.0068 to 0.019) with mean pO(2), median pO(2), and the fraction of voxels in the biopsy volume with pO(2) less than 3, 6, and 10 Torr.Conclusions: This validates EPROI hypoxic fractions at the molecular level and provides a new paradigm for the assessment of the relationship, in vivo, between hypoxia and hypoxia response proteins. When translated to human subjects, this will enhance understanding of human tumor pathophysiology and cancer response to therapy. [ABSTRACT FROM AUTHOR]- Published
- 2011
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22. Frequency bandwidth extension by use of multiple Zeeman field offsets for electron spin-echo EPR oxygen imaging of large objects.
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Seifi, Payam, Epel, Boris, Sundramoorthy, Subramanian V., Mailer, Colin, and Halpern, Howard J.
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ELECTRON spin echoes , *BANDWIDTHS , *FIELD theory (Physics) , *ELECTRON paramagnetic resonance , *SIGNAL-to-noise ratio , *OXYGEN , *IMAGING systems - Abstract
Purpose: Electron spin-echo (ESE) oxygen imaging is a new and evolving electron paramagnetic resonance (EPR) imaging (EPRI) modality that is useful for physiological in vivo applications, such as EPR oxygen imaging (EPROI), with potential application to imaging of multicentimeter objects as large as human tumors. A present limitation on the size of the object to be imaged at a given resolution is the frequency bandwidth of the system, since the location is encoded as a frequency offset in ESE imaging. The authors' aim in this study was to demonstrate the object size advantage of the multioffset bandwidth extension technique.Methods: The multiple-stepped Zeeman field offset (or simply multi-B) technique was used for imaging of an 8.5-cm-long phantom containing a narrow single line triaryl methyl compound (trityl) solution at the 250 MHz imaging frequency. The image is compared to a standard single-field ESE image of the same phantom.Results: For the phantom used in this study, transverse relaxation (T2e) electron spin-echo (ESE) images from multi-B acquisition are more uniform, contain less prominent artifacts, and have a better signal to noise ratio (SNR) compared to single-field T2e images.Conclusions: The multi-B method is suitable for imaging of samples whose physical size restricts the applicability of the conventional single-field ESE imaging technique. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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23. Comparison of 250 MHz electron spin echo and continuous wave oxygen EPR imaging methods for in vivo applications.
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Epel, Boris, Sundramoorthy, Subramanian V., Barth, Eugene D., Mailer, Colin, and Halpern, Howard J.
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ELECTRON spin echoes , *CONTINUOUS wave radar , *ELECTRON paramagnetic resonance , *OXYGEN , *IMAGING phantoms , *OPTICAL resolution , *HYPOXEMIA - Abstract
Purpose: The authors compare two electron paramagnetic resonance imaging modalities at 250 MHz to determine advantages and disadvantages of those modalities for in vivo oxygen imaging. Methods: Electron spin echo (ESE) and continuous wave (CW) methodologies were used to obtain three-dimensional images of a narrow linewidth, water soluble, nontoxic oxygen-sensitive trityl molecule OX063 in vitro and in vivo. The authors also examined sequential images obtained from the same animal injected intravenously with trityl spin probe to determine temporal stability of methodologies. Results: A study of phantoms with different oxygen concentrations revealed a threefold advantage of the ESE methodology in terms of reduced imaging time and more precise oxygen resolution for samples with less than 70 torr oxygen partial pressure. Above ∼100 torr, CW performed better. The images produced by both methodologies showed pO2 distributions with similar mean values. However, ESE images demonstrated superior performance in low pO2 regions while missing voxels in high pO2 regions. Conclusions: ESE and CW have different areas of applicability. ESE is superior for hypoxia studies in tumors. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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24. Multiple-stepped Zeeman field offset method applied in acquiring enhanced resolution spin-echo electron paramagnetic resonance images.
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Seifi, Payam, Epel, Boris, Mailer, Colin, and Halpern, Howard J.
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ELECTRON paramagnetic resonance , *TIME-domain analysis , *ELECTRON spin echoes , *MAGNETIC fields , *ZEEMAN effect , *MULTI-Batch (Electronic computer system) , *THREE-dimensional imaging , *IMAGING systems - Abstract
Purpose: Electron paramagnetic resonance (EPR) imaging techniques provide quantitative in vivo oxygen distribution images. Time-domain techniques including electron spin echo (ESE) imaging have been under study in recent years for their robustness and promising new features. One of the limitations of ESE imaging addressed here is the finite acquisition frequency bandwidth, which imposes limits on applied magnetic field gradients and the resulting image spatial resolution. In order to improve the image spatial resolution, we have extended the effective frequency bandwidth of the imaging system by acquiring projections at multiple Zeeman magnetic field offsets and combining them to restore complete projections obtained with more uniform frequency response, resulting in higher quality images. Methods: In multiple-stepped magnetic field or multi-B scheme, every projection of the three dimensional object is acquired at different main or Zeeman magnetic field (B) offset values. The data from field offset steps are combined, normalizing to the imaging system frequency acquisition window function, a sensitivity profile, to restore the complete projection. A multipurpose pulse EPR imager and phantoms containing the same type of spin probe (OX063H) used in routine animal imaging were also used in this study. Results: Using the multi-B method, we were able to acquire images of our phantoms with enhanced spatial resolution compared to the conventional ESE approach. Compared to standard single-B ESE images, the T2 resolutions of multi-B images were superior using a high spatial-resolution regime. Image artifacts present in high-gradient single-B ESE images are also substantially reduced using in the multi-B scheme. Conclusions: The multi-B method is less susceptible to instrumental limitations for larger gradient fields and acquiring images with higher spatial resolution better overall quality, without the need to alter the existing pulse ESE image acquisition hardware. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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25. Electron paramagnetic resonance oxygen imaging of a rabbit tumor using localized spin probe delivery.
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Epel, Boris, Haney, Chad R., Hleihel, Danielle, Wardrip, Craig, Barth, Eugene D., and Halpern, Howard J.
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ELECTRON paramagnetic resonance , *TUMORS , *PARAMAGNETISM , *ELECTRON spin echoes , *FEMORAL artery - Abstract
Purpose: Application of in vivo electron paramagnetic resonance (EPR) oxygen imaging (EPROI) to tumors larger than those of mice requires development of both instrumental and medical aspects of imaging. Methods: 250 MHz EPR oxygen imaging was performed using a loop-gap resonator with a volume exceeding 100 cm3. The paramagnetic spin probe was injected directly into the femoral artery feeding the rabbit leg/tumor. Results: The authors present continuous wave and electron spin echo EPR oxygen images of a large size (4 cm) VX-2 tumor located on the leg of a New Zealand white rabbit. Conclusions: This study demonstrates the feasibility of continuous wave and electron spin echo oxygen imaging modalities for investigation of volumes of tumor and normal tissue relevant to large animals. The injection of the spin probe directly into the artery feeding a rabbit leg will allow one to reduce, by over one order of magnitude, the amount of spin probe used as compared to whole animal IV injection. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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26. Electronic Structure of the Mn4OxCa Cluster in the S0 and S2 States of the Oxygen-Evolving Complex of Photosystem II Based on Pulse 55Mn-ENDOR and EPR Spectroscopy.
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Kulik, Leonid V., Epel, Boris, Lubitz, Wolfgang, and Messinger, Johannes
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CHEMICAL research , *ELECTRONIC structure , *METALLIC composites , *OXIDATION , *PROPERTIES of matter , *ELECTRON paramagnetic resonance , *ELECTRON nuclear double resonance spectroscopy - Abstract
The heart of the oxygen-evolving complex (OEC) of photosystem II is a Mn4OxCa cluster that cycles through five different oxidation states (S0 to S4) during the light-driven water-splitting reaction cycle. In this study we interpret the recently obtained 55Mn hyperfine coupling constants of the S0 and S2 states of the OEC [Kulik et al. J. Am. Chem. Soc. 2005, 127, 2392-2393] on the basis of Y-shaped spin-coupling schemes with up to four nonzero exchange coupling constants, J. This analysis rules out the presence of one or more Mn(IIions in So in methanol (3%) containing samples and thereby establishes that the oxidation states of the manganese ions in S0 and S2 are, at 4 K1 Mn4(III, III, III, IV) and Mn4(III, IV, IV, IV), respectively. By applying a ‘structure filter’ that is based on the recently reported single-crystal EXAFS data on the Mn4OxCa cluster [Yano et al. Science 2006, 314, 821-825] we (i) show that this new structural model is fully consistent with EPR and 55Mn-ENDOR data, (ii) assign the Mn oxidation states to the individual Mn ions, and (iii) propose that the known shortening of one 2.85 Å Mn-Mn distance in S0 to 2.75 Å in S1 [Robblee et al. J. Am. Chem. Soc. 2002, 124, 7459-7471] corresponds to a deprotonation of aμ-hydroxo bridge between MnA and MnB, i.e., between the outer Mn and its neighboring Mn of the μ3-oxo bridged moiety of the cluster. We summarize our results in a molecular model for the S0 → S1 and S1 → S2 transitions. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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27. Directional TV algorithm for fast EPR imaging.
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Fang, Chenyun, Xi, Yarui, Epel, Boris, Halpern, Howard, and Qiao, Zhiwei
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SIGNAL-to-noise ratio , *ELECTRON paramagnetic resonance , *ALGORITHMS - Abstract
Precise radiation guided by oxygen images has demonstrated superiority over the traditional radiation methods. Electron paramagnetic resonance (EPR) imaging has proven to be the most advanced oxygen imaging modality. However, the main drawback of EPR imaging is the long scan time. For each projection, we usually need to collect the projection many times and then average them to achieve high signal-to-noise ratio (SNR). One approach to fast scan is to reduce the repeating time for each projection. While the projections would be noisy and thus the traditional commonly-use filtered backprojection (FBP) algorithm would not be capable of accurately reconstructing images. Optimization-based iterative algorithms may accurately reconstruct images from noisy projections for they may incorporate prior information into optimization models. Based on the total variation (TV) algorithms for EPR imaging, in this work, we propose a directional TV (DTV) algorithm to further improve the reconstruction accuracy. We construct the DTV constrained, data divergence minimization (DTVcDM) model, derive its Chambolle–Pock (CP) solving algorithm, validate the correctness of the whole algorithm, and perform evaluations via simulated and real data. The experimental results show that the DTV algorithm outperforms the existing TV and FBP algorithms in fast EPR imaging. Compared to the standard FBP algorithm, the proposed algorithm may achieve 10 times of acceleration. [Display omitted] • We propose a DTV algorithm for fast EPR imaging to speed up the scan process 10 times. • This is the first extension and application of DTV algorithm in 3D pulsed EPRI. • We first give a simple but effective model-parameters selection method. • We accelerate the convergence rate by introducing two balanced parameters. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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28. Validation of the design of a high-sensitivity and high-resolution PET system for a preclinical PET/EPR hybrid scanner.
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Kim, Heejong, Hua, Yuexuan, Chen, Chin-Tu, Epel, Boris, Sundramoorthy, Subramanian, Halpern, Howard, and Kao, Chien-Min
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COMPOSITE columns , *PHOTON detectors , *SODIUM content of food , *SCANNING systems , *POSITRON emission tomography , *PETS , *ELECTRON paramagnetic resonance - Abstract
We report the development of a high-sensitivity and high-resolution PET subsystem for a next-generation preclinical PET/EPR hybrid scanner for investigating and improving hypoxia imaging with PET. The PET subsystem consists of 14 detector modules (DM) installed within a cylindrical supporting frame whose outer and inner diameters are 115 mm and 60 mm, respectively. Each DM contains eight detector units (DU) in a row and each DU is made of a 12 × 12 array of 1 × 1 × 10 mm 3 LYSO crystals (with a 1.05 mm pitch) coupled to a 4 × 4 silicon photomultiplier (SiPM) array that has a 3.2 mm pitch (Hamamatsu multi-pixel photon counter (MPPC) array 14161-3050HS-04). The PET subsystem has a 104 mm axial field-of-view (AFOV) that is sufficient for full-body mouse imaging, therefore enabling temporal and spatial correlation studies of tumor hypoxia between PET and EPR. It employs 1 mm-width crystals to support sub-millimeter image resolution that is desired for mouse imaging. Although a DM contains 1,152 LYSO crystals, by use of a newly devised signal readout method only six outputs are produced. Recently a partial prototype of this subsystem consisting of four DMs is built. In this paper, we present performance measurement results obtained for the developed DMs and initial imaging results obtained by the prototype. The developed DMs show uniformly superior performance in identifying the hit crystal and detector unit, in energy resolution, and in coincidence time resolution. The images obtained for a 22Na point source and a 18F-filled U-shaped tube source show an image resolution of about 1.1 mm and 1.2 mm FWHM in the transverse and axial directions respectively, and demonstrate successful imaging over the entire 104 mm AFOV of the prototype. This estimated image resolution however includes the contribution by the source size. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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29. Electronic Structure of a Weakly Antiferromagnetically Coupled Mn"Mn" Model Relevant to Manganese Proteins: A Combined EPR, 55Mn-ENDOR, and DFT Study.
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Cox, Nicholas, Ames, William, Epel, Boris, Kulik, Leonid V., Rapatskiy, Leonid, Neese, Frank, Messinger, Johannes, Wieghardt, Karl, and Lubitz, Wolfgang
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ELECTRONIC structure , *MANGANESE compounds , *LIGANDS (Chemistry) , *DENSITY functionals , *ELECTRON paramagnetic resonance , *ELECTRON nuclear double resonance - Abstract
An analysis of the electronic structure of the [MnIIMnIII(μ-OH)-(μ-piv)2(Me3tacn)2](ClO4)2 (PivOH) complex is reported. It displays features that include: (i) a ground 1/2 spin state; (ii) a small exchange (J) coupling between the two Mn ions; (iii) a mono-μ-hydroxo bridge, bis-μ-carboxylato motif; and (iv) a strongly coupled, terminally bound N ligand to the MnIII. All of these features are observed in structural models of the oxygen evolving complex (OEC). Multifrequency electron paramagnetic resonance (EPR) and electron nuclear double resonance (ENDOR) measurements were performed on this complex, and the resultant spectra simulated using the Spin Hamiltonian formalism. The strong field dependence of the 55Mn-ENDOR constrains the 55Mn hyperfine tensors such that a unique solution for the electronic structure can be deduced. Large hyperfine anisotropy is required to reproduce the EPR/ENDOR spectra for both the MnII and MnIII ions. The large effective hyperfine tensor anisotropy of the MnII, a d5 ion which usually exhibits small anisotropy, is interpreted within a formalism in which the fine structure tensor of the MnIII ion strongly perturbs the zero-field energy levels of the MnIIMnIII complex. An estimate of the fine structure parameter (d) for the MnIII of -4 cm-1 was made, by assuming the intrinsic anisotropy of the MnII ion is small. The magnitude of the fine structure and intrinsic (onsite) hyperfine tensor of the MnIII is consistent with the known coordination environment of the MnIII ion as seen from its crystal structure. Broken symmetry density functional theory (DFT) calculations were performed on the crystal structure geometry. DFT values for both the isotropic and the anisotropic components of the onsite (intrinsic) hyperfine tensors match those inferred from the EPR/ENDOR simulations described above, to within 5%. This study demonstrates that DFT calculations provide reliable estimates for spectroscopic observables of mixed valence Mn complexes, even in the limit where the description of a well isolated S = 1/2 ground state begins to break down. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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30. Simultaneous acquisition of pulse EPR orientation selective spectra
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Kaminker, Ilia, Florent, Marc, Epel, Boris, and Goldfarb, Daniella
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ELECTRON nuclear double resonance , *ELECTRON paramagnetic resonance , *NUCLEAR spin , *RELAXATION (Nuclear physics) , *SPECTROMETRY , *NITROXIDES - Abstract
Abstract: High resolution pulse EPR methods are usually applied to resolve weak magnetic electron-nuclear or electron–electron interactions that are otherwise unresolved in the EPR spectrum. Complete information regarding different magnetic interactions, namely, principal components and orientation of principal axis system with respect to the molecular frame, can be derived from orientation selective pulsed EPR measurements that are performed at different magnetic field positions within the inhomogeneously broadened EPR spectrum. These experiments are usually carried out consecutively, namely a particular field position is chosen, data are accumulated until the signal to noise ratio is satisfactory, and then the next field position is chosen and data are accumulated. Here we present a new approach for data acquisition of pulsed EPR experiments referred to as parallel acquisition. It is applicable when the spectral width is much broader than the excitation bandwidth of the applied pulse sequence and it is particularly useful for orientation selective pulse EPR experiments. In this approach several pulse EPR measurements are performed within the waiting (repetition) time between consecutive pulse sequences during which spin lattice relaxation takes place. This is achieved by rapidly changing the main magnetic field, B 0, to different values within the EPR spectrum, performing the same experiment on the otherwise idle spins. This scheme represents an efficient utilization of the spectrometer and provides the same spectral information in a shorter time. This approach is demonstrated on W-band orientation selective electron-nuclear double resonance (ENDOR), electron spin echo envelope modulation (ESEEM), electron–electron double resonance (ELDOR) – detected NMR and double electron–electron resonance (DEER) measurements on frozen solutions of nitroxides. We show that a factors of 3–6 reduction in total acquisition time can be obtained, depending on the experiment applied. [Copyright &y& Elsevier]
- Published
- 2011
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31. A balanced total-variation-Chambolle-Pock algorithm for EPR imaging.
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Qiao, Zhiwei, Redler, Gage, Epel, Boris, and Halpern, Howard
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COMPUTED tomography , *ELECTRON paramagnetic resonance , *IMAGE reconstruction , *THREE-dimensional imaging , *CONSTRAINED optimization , *PSYCHOLOGICAL feedback - Abstract
This work propose the balanced TV-CP algorithm for 3D EPR imaging. In the original TV-CP algorithm, the balance mechanism is not used and it corresponds to v = 1 of the new balanced TV-CP algorithm. In this figure, we may see that the original TV-CP algorithm is not convergent, whereas the balanced TV-CP algorithm with the appropriately selected balance parameter, i.e. v = 0.01, may reach convergence and achieve accurate reconstruction, which may be seen from the figure showing the data-divergence iteration-curves in this paper. By use of the balance mechanism, the balanced TV-CP algorithm may guarantee convergence and achieve accurate image reconstruction. [Display omitted] • The balanced TV-CP algorithm is proposed for 3D EPR imaging. • The original TV-CP algorithm cannot guarantee convergence. • The balanced TV-CP algorithm requires user feedback to guide convergence. • We perform simulation and real-data studies to evaluate how the balance parameter impacts convergence. • We give qualitative analysis via the data tolerance ellipse theory and the gradient descent principle. Total variation (TV) minimization algorithm is an effective algorithm capable of accurately reconstructing images from sparse projection data in a variety of imaging modalities including computed tomography (CT) and electron paramagnetic resonance imaging (EPRI). The data divergence constrained, TV minimization (DDcTV) model and its Chambolle-Pock (CP) solving algorithm have been proposed for CT. However, when the DDcTV-CP algorithm is applied to 3D EPRI, it suffers from slow convergence rate or divergence. We hypothesize that this is due to the magnitude imbalance between the data fidelity term and the TV regularization term. In this work, we propose a balanced TV (bTV) model incorporating a balance parameter and demonstrate its capability to avoid convergence issues for the 3D EPRI application. Simulation and real experiments show that the DDcTV-CP algorithm cannot guarantee convergence but the bTV-CP algorithm may guarantee convergence and achieve fast convergence by use of an appropriate balance parameter. Experiments also show that underweighting the balance parameter leads to slow convergence, whereas overweighting the balance parameter leads to divergence. The iteration-behavior change-law with the variation of the balance parameter is explained by use of the data tolerance ellipse and gradient descent principle. The findings and insights gained in this work may be applied to other imaging modalities and other constrained optimization problems. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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32. Small Animal IMRT Using 3D-Printed Compensators.
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Redler, Gage, Pearson, Erik, Liu, Xinmin, Gertsenshteyn, Inna, Epel, Boris, Pelizzari, Charles, Aydogan, Bulent, Weichselbaum, Ralph, Halpern, Howard J., and Wiersma, Rodney D.
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ELECTRON paramagnetic resonance , *RADIOTHERAPY safety , *RADIOTHERAPY , *RADIATION therapy equipment , *OXYGEN metabolism , *RADIOGRAPHIC films , *THERAPEUTICS , *COMPUTERS in medicine , *RESEARCH , *ANIMAL experimentation , *RESEARCH methodology , *POLYESTERS , *NUCLEAR magnetic resonance spectroscopy , *MEDICAL cooperation , *EVALUATION research , *COMPARATIVE studies , *RESEARCH funding , *THREE-dimensional printing , *IMAGING phantoms , *COPPER , *MICE ,CONNECTIVE tissue tumors - Abstract
Purpose: Preclinical radiation replicating clinical intensity modulated radiation therapy (IMRT) techniques can provide data translatable to clinical practice. For this work, treatment plans were created for oxygen-guided dose-painting in small animals using inverse-planned IMRT. Spatially varying beam intensities were achieved using 3-dimensional (3D)-printed compensators.Methods and Materials: Optimized beam fluence from arbitrary gantry angles was determined using a verified model of the XRAD225Cx treatment beam. Compensators were 3D-printed with varied thickness to provide desired attenuation using copper/polylactic-acid. Spatial resolution capabilities were investigated using printed test-patterns. Following American Association of Physicists in Medicine TG119, a 5-beam IMRT plan was created for a miniaturized (∼1/8th scale) C-shape target. Electron paramagnetic resonance imaging of murine tumor oxygenation guided simultaneous integrated boost (SIB) plans conformally treating tumor to a base dose (Rx1) with boost (Rx2) based on tumor oxygenation. The 3D-printed compensator intensity modulation accuracy and precision was evaluated by individually delivering each field to a phantom containing radiochromic film and subsequent per-field gamma analysis. The methodology was validated end-to-end with composite delivery (incorporating 3D-printed tungsten/polylactic-acid beam trimmers to reduce out-of-field leakage) of the oxygen-guided SIB plan to a phantom containing film and subsequent gamma analysis.Results: Resolution test-patterns demonstrate practical printer resolution of ∼0.7 mm, corresponding to 1.0 mm bixels at the isocenter. The miniaturized C-shape plan provides planning target volume coverage (V95% = 95%) with organ sparing (organs at risk Dmax < 50%). The SIB plan to hypoxic tumor demonstrates the utility of this approach (hypoxic tumor V95%,Rx2 = 91.6%, normoxic tumor V95%,Rx1 = 95.7%, normal tissue V100%,Rx1 = 7.1%). The more challenging SIB plan to boost the normoxic tumor rim achieved normoxic tumor V95%,Rx2 = 90.9%, hypoxic tumor V95%,Rx1 = 62.7%, and normal tissue V100%,Rx2 = 5.3%. Average per-field gamma passing rates using 3%/1.0 mm, 3%/0.7 mm, and 3%/0.5 mm criteria were 98.8% ± 2.8%, 96.6% ± 4.1%, and 90.6% ± 5.9%, respectively. Composite delivery of the hypoxia boost plan and gamma analysis (3%/1 mm) gave passing results of 95.3% and 98.1% for the 2 measured orthogonal dose planes.Conclusions: This simple and cost-effective approach using 3D-printed compensators for small-animal IMRT provides a methodology enabling preclinical studies that can be readily translated into the clinic. The presented oxygen-guided dose-painting demonstrates that this methodology will facilitate studies driving much needed biologic personalization of radiation therapy for improvements in patient outcomes. [ABSTRACT FROM AUTHOR]- Published
- 2021
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33. Modular imaging system: Rapid scan EPR at 800 MHz.
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Tseytlin, Oxana, Guggilapu, Priyaankadevi, Bobko, Andrey A., AlAhmad, Hussien, Xu, Xuan, Epel, Boris, O'Connell, Ryan, Hoblitzell, Emily H., Eubank, Timothy D., Khramtsov, Valery V., Driesschaert, Benoit, Kazkaz, Eiad, and Tseytlin, Mark
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IMAGING systems , *ARBITRARY waveform generators , *ELECTRON paramagnetic resonance , *SIGNAL detection , *AUTOMATIC control systems - Abstract
• Modular semi-digital EPR imaging system was developed. • Digital automatic frequency control minimizes RF reflection. • Digital automatic scan control stabilizes field scans. • Surface loop resonator for RS EPR was developed. • In vivo RS EPR imaging at 800 MHz was demonstrated. An electron paramagnetic resonance (EPR) imaging system has been custom built for use in pre-clinical and, potentially, clinical studies. Commercial standalone modules have been used in the design that are MATLAB-controlled. The imaging system combines digital and analog technologies. It was designed to achieve maximum flexibility and versatility and to perform standard and novel user-defined experiments. This design goal is achieved by frequency mixing of an arbitrary waveform generator (AWG) output at the intermediate frequency (IF) with a constant source frequency (SF). Low noise SF at 250, 750, and 1000 MHz are available in the system. A wide range of frequencies from near-baseband to L-band can be generated as a result. Two-stage downconversion at the signal detection side is implemented that enables multi-frequency EPR capability. In the first stage, the signal frequency is converted to IF. A novel AWG-enabled digital auto-frequency control method that operates at IF is described that is used for automatic resonator tuning. Quadrature baseband EPR signal is generated in the second downconversion step. The semi-digital approach of mixing low-noise frequency sources with an AWG permits generation of arbitrary excitation patterns that include but are not limited to frequency sweeps for resonator tuning and matching, continuous-wave, and pulse sequences. Presented in this paper is the demonstration of rapid scan (RS) EPR imaging implemented at 800 MHz. Generation of stable magnetic scan waveforms is critical for the RS method. A digital automatic scan control (DASC) system was developed for sinusoidal magnetic field scans. DASC permits tight control of both amplitude and phase of the scans. A surface loop resonator was developed using 3D printing technology. RS EPR imaging system was validated using sample phantoms. In vivo imaging of a breast cancer mouse model is demonstrated. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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34. Optimization-based image reconstruction from sparsely sampled data in electron paramagnetic resonance imaging.
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Qiao, Zhiwei, Zhang, Zheng, Pan, Xiaochuan, Epel, Boris, Redler, Gage, Xia, Dan, and Halpern, Howard
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ELECTRON paramagnetic resonance , *SPATIAL distribution (Quantum optics) , *DATA acquisition systems , *IMAGING phantoms , *IMAGE reconstruction - Abstract
Electron paramagnetic resonance imaging (EPRI) can yield information about the 3-dimensional (3D) spatial distribution of the unpaired-electron-spin density from which the spatial distribution of oxygen concentration within tumor tissue, referred to as the oxygen image or electron paramagnetic resonance (EPR) image in this work, can be derived. Existing algorithms for reconstruction of EPR images often require data collected at a large number of densely sampled projection views, resulting in a prolonged data-acquisition time and consequently numerous practical challenges especially to in vivo animal EPRI. Therefore, a strong interest exists in shortening data-acquisition time through reducing the number of data samples collected in EPRI, and one approach is to acquire data at a reduced number of sparsely distributed projection views from which existing algorithms may reconstruct images with prominent artifacts. In this work, we investigate and develop an optimization-based technique for image reconstruction from data collected at sparsely sampled projection views for reducing scanning time in EPRI. Specifically, we design a convex optimization program in which the EPR image of interest is formulated as a solution and then tailor the Chambolle-Pock (CP) primal-dual algorithm to reconstruct the image by solving the convex optimization program. Using computer-simulated EPRI data from numerical phantoms and real EPRI data collected from physical phantoms, we perform studies on the verification and characterization of the optimization-based technique for EPR image reconstruction. Results of the studies suggest that the technique may yield accurate EPR images from data collected at sparsely distributed projection views, thus potentially enabling fast EPRI with reduced acquisition time. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
35. An iterative reconstruction algorithm without system matrix for EPR imaging.
- Author
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Qiao, Zhiwei, Lu, Yang, Liu, Peng, Epel, Boris, and Halpern, Howard
- Subjects
- *
IMAGE reconstruction , *POSITRON emission tomography computed tomography , *ELECTRON paramagnetic resonance , *POSITRON emission tomography , *ITERATIVE learning control - Abstract
We propose a new iterative reconstruction algorithm without system matrix for EPR imaging. It is based on the idea of image rotation. Thus, the complicated calculation of system matrix may be avoided. For the plane-driven projection method illustrated by the left figure, one must calculate the intersecting area of a plane with a cube. But, for the rotation-driven projection method illustrated by the right figure, one just need rotate the 3D object and sum up the voxel-values of the voxels layer by layer. [Display omitted] • An iterative reconstruction method without system matrix for EPR imaging is proposed. • The core idea is the design of new projection and backprojection methods based on image-rotation. • The new algorithm can achieve the comparable accuracy relative to the traditional algorithm with system matrix. • The new algorithm may avoid the complicated calculation of system matrix. Electron paramagnetic resonance (EPR) imaging is an advanced oxygen imaging modality for oxygen-image guided radiation. The iterative reconstruction algorithm is the research hot-point in image reconstruction for EPR imaging (EPRI) for this type of algorithm may incorporate image-prior information to construct advanced optimization model to achieve accurate reconstruction from sparse-view projections and/or noisy projections. However, the system matrix in the iterative algorithm needs complicated calculation and needs huge memory-space if it is stored in memory. In this work, we propose an iterative reconstruction algorithm without system matrix for EPRI to simplify the whole iterative reconstruction process. The function of the system matrix is to calculate the projections, whereas the function of the transpose of the system matrix is to perform backprojection. The existing projection and backprojection methods are all based on the configuration that the imaged-object remains stationary and the scanning device rotates. Here, we implement the projection and backprojection operations by fixing the scanning device and rotating the object. Thus, the core algorithm is only the commonly-used image-rotation algorithm, while the calculation and store of the system matrix are avoided. Based on the idea of image rotation, we design a specific iterative reconstruction algorithm for EPRI, total variation constrained data divergence minimization (TVcDM) algorithm without system matrix, and named it as image-rotation based TVcDM (R-TVcDM). Through a series of comparisons with the original TVcDM via real projection data, we find that the proposed algorithm may achieve similar reconstruction accuracy with the original one. But it avoids the complicated calculation and store of the system matrix. The insights gained in this work may be also applied to other imaging modalities, for example computed tomography and positron emission tomography. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
36. A Dynamic Nuclear Polarization spectrometer at 95GHz/144MHz with EPR and NMR excitation and detection capabilities
- Author
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Feintuch, Akiva, Shimon, Daphna, Hovav, Yonatan, Banerjee, Debamalya, Kaminker, Ilia, Lipkin, Yaacov, Zibzener, Koby, Epel, Boris, Vega, Shimon, and Goldfarb, Daniella
- Subjects
- *
POLARIZATION (Nuclear physics) , *NUCLEAR magnetic resonance , *ELECTRON paramagnetic resonance , *SPECTROMETERS , *LOW temperatures , *IRRADIATION , *MICROWAVES - Abstract
Abstract: A spectrometer specifically designed for systematic studies of the spin dynamics underlying Dynamic Nuclear Polarization (DNP) in solids at low temperatures is described. The spectrometer functions as a fully operational NMR spectrometer (144MHz) and pulse EPR spectrometer (95GHz) with a microwave (MW) power of up to 300mW at the sample position, generating a MW B 1 field as high as 800KHz. The combined NMR/EPR probe comprises of an open-structure horn-reflector configuration that functions as a low Q EPR cavity and an RF coil that can accommodate a 30–50μl sample tube. The performance of the spectrometer is demonstrated through some basic pulsed EPR experiments, such as echo-detected EPR, saturation recovery and nutation measurements, that enable quantification of the actual intensity of MW irradiation at the position of the sample. In addition, DNP enhanced NMR signals of samples containing TEMPO and trityl are followed as a function of the MW frequency. Buildup curves of the nuclear polarization are recorded as a function of the microwave irradiation time period at different temperatures and for different MW powers. [Copyright &y& Elsevier]
- Published
- 2011
- Full Text
- View/download PDF
37. HYSCORE and DEER with an upgraded 95GHz pulse EPR spectrometer
- Author
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Goldfarb, Daniella, Lipkin, Yaakov, Potapov, Alexey, Gorodetsky, Yehoshua, Epel, Boris, Raitsimring, Arnold M., Radoul, Marina, and Kaminker, Ilia
- Subjects
- *
SPECTRUM analysis instruments , *ELECTRON paramagnetic resonance , *PARTICLES (Nuclear physics) , *ELECTRIC equipment - Abstract
Abstract: The set-up of a new microwave bridge for a 95GHz pulse EPR spectrometer is described. The virtues of the bridge are its simple and flexible design and its relatively high output power (0.7W) that generates π pulses of 25ns and a microwave field, B 1 =0.71 mT. Such a high B 1 enhances considerably the sensitivity of high field double electron-electron resonance (DEER) measurements for distance determination, as we demonstrate on a nitroxide biradical with an interspin distance of 3.6nm. Moreover, it allowed us to carry out HYSCORE (hyperfine sublevel-correlation) experiments at 95GHz, observing nuclear modulation frequencies of 14N and 17O as high as 40MHz. This opens a new window for the observation of relatively large hyperfine couplings, yet not resolved in the EPR spectrum, that are difficult to observe with HYSCORE carried out at conventional X-band frequencies. The correlations provided by the HYSCORE spectra are most important for signal assignment, and the improved resolution due to the two dimensional character of the experiment provides 14N quadrupolar splittings. [Copyright &y& Elsevier]
- Published
- 2008
- Full Text
- View/download PDF
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