1. Synthesis, biological evaluation and molecular modeling of urea-containing MraY inhibitors.
- Author
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Oliver M, Le Corre L, Poinsot M, Corio A, Madegard L, Bosco M, Amoroso A, Joris B, Auger R, Touzé T, Bouhss A, Calvet-Vitale S, and Gravier-Pelletier C
- Subjects
- Structure-Activity Relationship, Models, Molecular, Molecular Structure, Gram-Positive Bacteria drug effects, Dose-Response Relationship, Drug, Gram-Negative Bacteria drug effects, Molecular Docking Simulation, Transferases antagonists & inhibitors, Transferases metabolism, Pentosyltransferases antagonists & inhibitors, Pentosyltransferases metabolism, Transferases (Other Substituted Phosphate Groups), Urea pharmacology, Urea chemistry, Urea chemical synthesis, Urea analogs & derivatives, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents chemical synthesis, Anti-Bacterial Agents chemistry, Microbial Sensitivity Tests, Enzyme Inhibitors pharmacology, Enzyme Inhibitors chemical synthesis, Enzyme Inhibitors chemistry, Bacterial Proteins antagonists & inhibitors, Bacterial Proteins metabolism
- Abstract
The straightforward synthesis of aminoribosyl uridines substituted by a 5'-methylene-urea is described. Their convergent synthesis involves the urea formation from various activated amides and an azidoribosyl uridine substituted at the 5' position by an aminomethyl group. This common intermediate resulted from the diastereoselective glycosylation of a phthalimido uridine derivative with a ribosyl fluoride as a ribosyl donor. The inhibition of the MraY transferase activity by the synthetized 11 urea-containing inhibitors was evaluated and 10 compounds revealed MraY inhibition with IC
50 ranging from 1.9 μM to 16.7 μM. Their antibacterial activity was also evaluated on a panel of Gram-positive and Gram-negative bacteria. Four compounds exhibited a good activity against Gram-positive bacterial pathogens with MIC ranging from 8 to 32 μg mL-1 , including methicillin resistant Staphylococcus aureus (MRSA) and Enterococcus faecium. Interestingly, one compound also revealed antibacterial activity against Pseudomonas aeruginosa with MIC equal to 64 μg mL-1 . Docking experiments predicted two modes of positioning of the active compounds urea chain in different hydrophobic areas (HS2 and HS4) within the MraY active site from Aquifex aeolicus. However, molecular dynamics simulations showed that the urea chain adopts a binding mode similar to that observed in structural model and targets the hydrophobic area HS2.- Published
- 2021
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