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Tuber dormancy and sprouting are commercially important potato traits as long-term tuber storage is necessary to ensure year-round availability. Premature dormancy release and sprout growth in tubers during storage can result in a significant deterioration in product quality. In addition, the main chemical sprout suppressant chlorpropham has been withdrawn in Europe, necessitating alternative approaches for controlling sprouting. Breeding potato cultivars with longer dormancy and slower sprout growth is a desirable goal, although this must be tempered by the needs of the seed potato industry, where dormancy break and sprout vigour are required for rapid emergence. We have performed a detailed genetic analysis of tuber sprout growth using a diploid potato population derived from two highly heterozygous parents. A dual approach employing conventional QTL analysis allied to a combined bulk-segregant analysis (BSA) using a novel potato whole-exome capture (WEC) platform was evaluated. Tubers were assessed for sprout growth in storage at six time-points over two consecutive growing seasons. Genetic analysis revealed the presence of main QTL on five chromosomes, several of which were consistent across two growing seasons. In addition, phenotypic bulks displaying extreme sprout growth phenotypes were subjected to WEC sequencing for performing BSA. The combined BSA and WEC approach corroborated QTL locations and served to narrow the associated genomic regions, while also identifying new QTL for further investigation. Overall, our findings reveal a very complex genetic architecture for tuber sprouting and sprout growth, which has implications both for potato and other root, bulb and tuber crops where long-term storage is essential.

Curing of freshly harvested yams (Dioscorea spp.) is a process for wounded yams during harvest to heal. In this work the effectiveness of straw, polypropylene and jute sack on curing of seven key farmers’ yam varieties over a duration of 7, 14 and 21 days was studied. Seven key farmers’ yam varieties identified as Pona, Lariboko, Dente, Mutwumudoo, Serwah belonging to D. rotundata, Matches and Akaba belonging to D. alata were studied under different curing treatments. The percentage weight loss of yam tubers varied among the treatments over curing period. Curing under jute sack showed all yam varieties had weight losses less than 2.0%, within 7 days of curing. Five different varieties had weight loss less than 2.0% except Dente under the straw treatment. Mutwumudoo variety showed the highest water loss (8.4%) for polypropylene sheet and 6.9% for Lariboko in the control treatment. During 7 days curing the control and polypropylene treatment did not support yam curing. After 14 days of curing of tubers, similar tends were observed as in 7 days curing. After 14 days of curing under jute sack, percentage weight loss of the tubers ranges from 2.0% - 3.7%. In the straw treatment, the percentage weight loss ranges between 1.0% - 4.7% in all other varieties except Dente (D. rotundata) (8.2%). Polypropylene sheet treatment showed the highest percentage weight loss in Mutwumudoo variety (18.4%). A similar trend was observed for the yam tubers cured for 21days as percentage weight loss of tubers under jute sacks was 2.5 – 9.8%. Curing temperature and humidity ranged between 27&degC - 40&degC and 87% - 100% rh for yam tubers under the three different treatments of polypropylene, jute and straw. However, the control treatment recorded lower humidity of 60% - 80% rh. Curing material, duration, climatic conditions and yam varieties influenced curing and Serwah variety, which is a D. rotundata is the best bet yam variety to cure under jute sack for 7, 14 and 21 days of curing.

The effect of continuous exposure to ozone at 0.45, 0.9 and 2 μmol mol−1 on quality changes during the storage of red and green chilli peppers at 10 °C was investigated. Ozone at 0.45 and 0.9 μmol mol−1 reduced disease incidence in red peppers, with no further benefits at 2 μmol mol−1. Ozone at 0.9 μmol mol−1 reduced weight loss during storage and improved firmness maintenance. Skin colour was bleached in red peppers exposed to ozone at 2 μmol mol−1, and in green ones at all tested doses. Total phenolic content was not affected by ozone but antioxidant activity was reduced in green chilli peppers exposed to ozone at 2 μmol mol−1, due to lower ascorbic acid content in those samples. Ozone at 0.9 μmol mol−1 extended the shelf-life of chilli peppers.

Given the increasing importance of organic produce, a study was carried out to find out how organic production methods affect postharvest and storage quality of ‘Conference’ pears (Pyrus communis). When fruit were taken out of cold storage and artificially infected either with Monilinia fructigena or Penicillium expansum disease development was significantly slower in organic pears than in conventional pears. The effects were more marked for M. fructigena which is the more aggressive pathogen (about 20% inhibition of lesion growth rate), compared with a smaller, but significant effect on P. expansum (5-10% inhibition of lesion growth rate). Organic pears had higher dry matter content (15.6% compared with 14.7%) and were firmer than conventionally-produced fruit, which may affect the rate of pathogen growth. Analysis of total phenols indicated an increase induced by infection by either pathogen, but no significant differences either before or after infection between organically and conventionally-produced pears.

Chlorophyll fluorescence has been tested by many researchers as a non-invasive method to assess physiological damage in chlorophyll containing fruits and vegetables. The characteristic Fv/Fm is most commonly considered. One draw-back of this method is that the fluorescence signal is affected primarily by the state of photosystem II, which is one of the components most sensitive to stresses, including heat, chilling and oxidative stress, so that the Fv/Fm may be more sensitive than the overall tissue. A more reliable strategy may be to look at the ability of the tissues to resynthesise photosystem II after damage, by looking at the rate of Fv/Fm recovery. This strategy shows promising results in predicting chilling injury in peppers and cucumbers, and heat stress in asparagus. Trials are also reported that attempt to predict low temperature injury in apples, but the results are not definitive.

An understanding of the control of sprouting of sweetpotatoes (Ipomoea batatas) is important, both for marketing of sweetpotatoes in the developed world and for the role of the crop for food security in the developing world. Long-term storage of sweetpotatoes requires inhibition of sprouting, while stimulation of sprouting is necessary for the production of planting material. Many studies have been conducted on the control of sprouting/dormancy of potatoes whereas sprouting in sweetpotatoes is less studied. Recently, exposure to ethylene has been introduced as a commercial method for controlling of sprouting in potatoes. Data presented here show that 20 ppm ethylene is effective in controlling sprouting in sweet potato over 4 weeks of storage at 25°C. Gibberellins appear to have a key role in stimulating sprout growth in potato. Trials using gibberellins and gibberellin synthesis inhibitors suggest that gibberellins are likewise involved in the stimulation of sprouting in sweetpotatoes.

It has previously been shown that sweetpotato cultivars differ in the efficiency by which their roots can heal wounds at low humidity, although this does not appear to relate to rate of wound-healing at high humidity. It has also been shown previously that there is a negative relationship between cultivar root dry matter (DM) content and efficiency of root wound-healing at low humidity (assessed by a lignification score; LS). Root DM content tends to be negatively related to root sugar levels. The study presented here was undertaken to examine further the role of carbohydrates in root response and ability to heal wounds in the presence of water stress. Data from 17 cultivars confirmed the negative correlation between LS and DM and the positive correlation between LS and root sugar levels. Measurement of sugar levels at the root surface both at the time of wounding and after complete healing (5 days) for 10 cultivars indicated a stronger relationship of LS with final sugar levels than initial DM content. This was confirmed in further experiments using a system of adjacent tissue cuboids cut from the parenchyma which were able to exhibit lignification almost as efficiently as whole roots. With this system it was also possible to demonstrate a relatively rapid accumulation of sugars within 24 h of healing. The data were examined further by the development of linear regression models of LS. Comparison of the levels of variance accounted for by the models indicates that LS is strongly cultivar dependent, and most of the cultivar effect is related to cultivar differences in sugar levels during wound-healing. Differences in sugar levels between roots/cuboids of each cultivar also have an effect. Further, the similarity of the models for the whole roots and cuboids gives us confidence in the validity of using the cuboids to investigate wound-healing of whole roots.

This paper presents a study on the wound healing processes in sweetpotatoes ( Ipomoea batatas Lam.) when exposed to tropical conditions typical for marketing (RH 50–73%, T 25–30 °C). The physiological processes during healing were revisited. At low humidities (65% ± 10) the depth of the lignified layer i.e. the thickness of the desiccated cell layers was affected by both cultivar and humidity. Some cultivars consistently failed to produce a lignified layer and for others the layer was often not continuous. The continuity of the lignified layer was more important for effectiveness of wound healing than the actual thickness. A method for assessing efficiency of wound healing based on assessing the continuity of lignified layers was developed, and called the lignification score. Wound healing efficiency as measured by the lignification score was found to be a major factor for the shelf-life of sweetpotato cultivars. Lignification of wounds correlated with reduced rate of weight loss and reduced susceptibility to microbial infection. A high dry matter content in cultivars correlated with a low lignification score. This relationship was consistent for five trials, including 34 cultivars.

Grain yields of eight representative semidwarf spring wheat (Triticum aestivum L.) cultivars released in northwest Mexico between 1962 and 1988 have increased linearly across years as measured in this region during 6 yr under favorable management and irrigation. To understand the physiological basis of this progress and possibly assist future selection for grain yield, leaf traits were determined during 3 yr in the same study. Stomatal conductance (g(S)), maximum photosynthetic rate (A(max)), and canopy temperature depression (CTD), averaged over the 3 yr, were closely and positively correlated with progress in the 6-yr mean yield. The correlation was greatest with g(S) (r = 0.94 P < 0.01). Compared with the overall yield increase of 27%, g(S) increased 63%, A(max) increased 23%, and canopies were 0.6 degree C cooler. Carbon-13 isotope discrimination was also positively associated with yield progress (r = 0.71, P < 0.05), but other leaf traits such as flag leaf area, specific leaf weight, percentage N and greeness were not, nor was crop growth rate around anthesis. The causal basis of the leaf activity interrelationships is reasonably clear, with both increased intercellular CO2 concentration and increased mesophyll activity contributing to the increase in A(max). However, causal links to the yield progress, and the accompanying increase in kernels per square meter, are not clear. It is concluded that g(S) and CTD should be further investigated as potential indirect selection criteria for yield.

A new hypothesis is presented to explain the major molecular process that regulates the efficiency of light harvesting by chloroplast membranes. It is proposed that in excess light the decrease in the thylakoid lumen pH causes an increase in aggregation of the light harvesting complexes of photosystem II resulting in formation of an efficient pathway for non-radiative dissipation of excitation energy. The aggregation is potentiated by the conversion of violaxanthin to zeaxanthin. This hypothesis is based upon (i) similarity between the spectroscopic changes associated with energy dissipation and those observed upon aggregation of isolated light harvesting complex; and (ii) the link between changes in light scattering and increased energy dissipation.

The thylakoid membranes of higher plants possess several mechanisms that control both the distribution and rate of dissipation of absorbed light. These mechanisms, which allow regulation of photosynthetic electron transport in response to alteration in external and internal factors, can be observed as the various processes that quench chlorophyll fluorescence. By using the 'light-doubling techniques’, together with analysis of quenching relaxation, it is possible to assess quantitatively the extents of these regulatory processes and to allow their interrelations to be studied. These techniques can be applied to in vitro systems or to leaves, and can be particularly useful when applied with electron-transport measurements and when models are used to aid interpretation. Results of quenching analysis at different light intensities in isolated thylakoids, intact chloroplasts, protoplasts, algae and leaves of a variety of species are presented.

The extent of energy-dependent quenching of chlorophyll fluorescence in broken spinach chloroplasts has been quantitatively related to the size of the thylakoid proton gradient as measured by the quenching of 9-aminoacridine fluorescence by titration at constant irradiance with the uncoupler nigericin or by change in irradiance. It was found that chloroplasts prepared from leaves that had been pre-illuminated with strong light for 30 min showed energy-dependent quenching at a lower proton gradient than chloroplasts prepared from dark-adapted leaves. Measurement of the carotenoid composition of the thylakoids showed that light treatment raised the ratio of zeaxanthin: violaxanthin. The possible dependence of energy-dependent quenching on xanthophyll composition and the physiological implications of this light-activation process to the regulation of photosynthetic electron transport are discussed.

The quantitative relationship between energy-dependent quenching of chlorophyll fluorescence (qE) and trans-thylakoid pH difference (ΔpH, estimated with 9-aminoacridine) was compared in chloroplasts from leaves preilluminated at low oxygen in the absence of CO2 with chloroplasts from leaves darkened under the same conditions. The extent of both phenomena was varied by changes in actinic light intensity. Chloroplasts from preilluminated leaves contained high levels of zeaxanthin (up to 15% of total carotenoid) and were capable of forming qE at lower ΔpH values than chloroplasts from dark-adapted leaves, which lacked zeaxanthin. Infusion of dithiothreitol into leaves prior to preillumination prevented the light-induced formation of zeaxanthin; chloroplasts prepared from these leaves showed the same relationship between qE and ΔpH observed in chloroplasts fom dark-adapted leaves. The rate of appearance and disappearance of the change in relationship between qE and ΔpH upon leaf preillumination and darkening was closely matched by the kinetics of synthesis and degradation of zeaxanthin. The quantitative relationship between qE and quenching of the dark-level of fluorescence (F0) was very similar in chloroplasts from preilluminated or dark-adapted leaves, containing disparate amounts of zeaxanthin. In both sets of chloroplasts, qE was inhibited by antimycin A. These latter observations suggest that the formation of qE involves mechanistically similar features in chloroplasts containing or lacking zeaxanthin. Overall, the data are discussed in terms of action of zeaxanthin as a ‘quenching amplifier’, functioning physiologically to allow qE formation in the absence of high ΔpH potentially prohibitive to high rates of CO2 fixation.