1. Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging
- Author
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Jeffrey S. Grethe, Sanu Ann Abraham, Julianna F. Bates, Matt Travers, Troy Sincomb, Mathias Goncalves, Jean-Baptiste Poline, Christian Haselgrove, Yaroslav O. Halchenko, Tom Gillespie, Steven M. Hodge, Nina Preuss, Michael Hanke, Dorota Jarecka, Satrajit S. Ghosh, Kyle Meyer, Albert Crowley, Jakub Kaczmarzyk, David N. Kennedy, Smruti Padhy, David Keator, and Maryann E. Martone
- Subjects
Computer science ,Best practice ,Population ,Biomedical Engineering ,Neuroscience (miscellaneous) ,050105 experimental psychology ,GeneralLiterature_MISCELLANEOUS ,lcsh:RC321-571 ,Domain (software engineering) ,03 medical and health sciences ,Substance Misuse ,data model ,0302 clinical medicine ,Neuroimaging ,Clinical Research ,re-executability ,0501 psychology and cognitive sciences ,education ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,Implementation ,reproducibility ,education.field_of_study ,neuroimaging ,05 social sciences ,Perspective (graphical) ,Substance Abuse ,Neurosciences ,Data science ,Computer Science Applications ,publication ,Perspective ,Cognitive Sciences ,Last mile ,030217 neurology & neurosurgery ,Neuroscience - Abstract
There has been a recent major upsurge in the concerns about reproducibility in many areas of science. Within the neuroimaging domain, one approach is to promote reproducibility is to target the re-executability of the publication. The information supporting such re-executability can enable the detailed examination of how an initial finding generalizes across changes in the processing approach, and sampled population, in a controlled scientific fashion. ReproNim: A Center for Reproducible Neuroimaging Computation is a recently funded initiative that seeks to facilitate the "last mile" implementations of core re-executability tools in order to reduce the accessibility barrier and increase adoption of standards and best practices at the neuroimaging research laboratory level. In this report, we summarize the overall approach and tools we have developed in this domain.
- Published
- 2019
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