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Presented are the development of the concept and projects of the basin nature management and the organization of their implementation in the whole region using the basin-administrative approach. Based on the multidimensional analysis and forecast of river runoff variations using the artificial neural networks, the typification of catchments is carried out mainly defined by such factors as its area, order of the river, and degree of anthropogenic load. Depending on the hydrological functioning type, the adapted complexes of Hydroecological activities are determined. The need in the integration of the geodata for each river basin with the inherent morphological and process characteristics as well as of the results of Hydroecological monitoring enables to recommend the structure of the database of the basin organization of nature management in the regions of Russia based on the European experience in the river network monitoring in the context of the EU Water Framework Directive and of the creation of the single infrastructure of the spatial data. [ABSTRACT FROM AUTHOR]