1. Characterization of the Polyproline Region of the Hepatitis E Virus in Immunocompromised Patients.
- Author
-
Lhomme, Sebastien, Abravanel, Florence, Dubois, Martine, Sandres-Saune, Karine, Mansuy, Jean-Michel, Rostaing, Lionel, Kamar, Nassim, and Izopet, Jacques
- Subjects
- *
POLYPROLINE , *HEPATITIS E , *IMMUNOCOMPROMISED patients , *VIRAL adaptation , *GENOTYPES , *DIAGNOSIS - Abstract
Little is known about virus adaptation in immunocompromised patients with chronic genotype 3 hepatitis E virus (HEV3) infections. Virus-host recombinant strains have been isolated recently from chronically infected patients. The nature and incidence of such recombinant events occurring during infections of solid-organ transplant (SOT) recipients are essentially unknown. The polyproline region (PPR) of strains isolated from SOT patients was sequenced during the acute-infection phase (n=59) and during follow-up of patients whose infections became chronic (n=27). These 27 HEV strains included 3 (11%) that showed recombinant events 12, 34, 48, or 88 months after infection. In one strain, parts of the PPR and the RNA-dependent RNA polymerase were concomitantly inserted. In the second, a fragment of a human tyrosine aminotransferase (TAT) gene was inserted first, followed by a fragment of PPR. A fragment of the human inter--trypsin inhibitor (ITI) gene was inserted in the third. All the inserted sequences were rich in aliphatic and basic amino acids. In vitro growth experiments suggest that the ITI insertion promoted more vigorous virus growth. In silico studies showed that the inserted sequences could provide potential acetylation, ubiquitination, and phosphorylation sites. We found that recombinant events had occurred in the HEV PPR in approximately 11% of the strains isolated from chronically infected transplant patients followed up in Toulouse University Hospital. These inserted fragments came from the HEV genome or a human gene and could enhance virus replication. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF