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Shallow lakes may play an important role for the nitrogen (N) balance in drainage basins by processing, transferring and retaining N inputs. An increase in the frequency of storm-induced short-term N pulses and increased water temperatures are both likely outcomes of climate change, potentially affecting the N processing in lakes., An experiment with a K15 NO3− pulse addition (increase in NO3− concentration from c. 0.1 to 2 mg/L) was carried out in 12 mesocosms with relatively low (applies to Danish lakes) total N ( TN) and total phosphorus ( TP) concentrations ( c. 0.3 mg N L−1 and 0.04 mg P L−1) to assess the effects of an N pulse on N processing and storage in shallow lake ecosystems. The mesocosms have a hydraulic retention time of approximately two and a half months, and at the time of the experiment, they had been adapted to contrasting temperatures for a period of 10 years: ambient, T3 (heating according to the Intergovernmental Panel on Climate Change 2007 A2 scenario, +3.7-4.5°C, depending on season) and T5 (heating with A2 + 50%, +4.9-6.6°C)., Macrophytes and filamentous algae retained up to 40% and 30% of the added 15N, respectively, reflecting their high biomass in the mesocosms. Macrophytes and filamentous algae constituted between 70% and 80% of the biomass of all primary producers during the experiment in the T3 and ambient treatments and between 20% and 40% in T5. By comparison, less than 1% of the added 15N diffused to the sediment and less than 5% was lost to the atmosphere as N2 gas. Snails represented the long-term storage of 15N, retaining up to 6% of the tracer and with detectable enrichment 100 days after tracer addition., We found no significant differences among the temperature treatments in the 15N turnover after pulse dosing. However, a larger percentage of 15N was stored in macrophytes in the ambient and T3 mesocosms, reflecting higher biomasses than in T5 where filamentous algae were more abundant. Macrophytes and filamentous algae rather than temperature were therefore key controllers of N processing during the summer N pulse in these shallow, relatively low TP lakes. [ABSTRACT FROM AUTHOR]

Shallow lakes are a key component of the global carbon cycle. It is, therefore, important to know how shallow lake ecosystems will respond to the current climate change. Global warming affects not only average temperatures, but also the frequency of heat waves (HW). The impact of extreme events on ecosystems processes, particularly greenhouse gas ( GHG) emissions, is uncertain., Using the world's longest-running shallow lake experiment, we studied the effects of a simulated summer HW on the fluxes of carbon dioxide ( CO2), methane ( CH4) and nitrous oxide (N2O). The experimental mesocosms had been exposed to different temperature treatments and nutrient loading for 11 years prior to the artificial HW., In general, there was an increase in total GHG emissions during the 1-month artificial HW, with a significant increase in CO2, CH4 and N2O being observed in the shallow lake mesocosms. No significant effect of the HW on CO2 emissions could be traced, though, in the mesocosms with high nutrient levels. Furthermore, the data suggested that in addition to the direct effect of increased temperature on metabolic processes during the HW, biotic interactions exerted a significant control of GHG emissions. For example, at low nutrient levels, increased CO2 emissions were associated with low macrophyte abundance, whereas at high nutrient levels, decreased phytoplankton abundance was linked to increased emissions of CO2 and CH4., In contrast to the observable heat-wave effect, no clear general effect of the long-term temperature treatments could be discerned over the summer, likely because the potential effects of the moderate temperature increase, applied as a press disturbance, were overridden by biotic interactions. This study demonstrates that the role of biotic interactions needs to be considered within the context of global warming on ecosystem processes. [ABSTRACT FROM AUTHOR]

Differences in trophic web structure in otherwise similar ecosystems as a consequence of direct or indirect effects of ambient temperature differences can lead to changes in ecosystem functioning. Based on nitrogen and carbon stable isotope analysis, we compared the food-web structure in a series of subtropical (Uruguay, 30-35°S) and temperate (Denmark, 55-57°N) shallow lakes. The food-web length was on average one trophic position shorter in the subtropical shallow lakes compared with their temperate counterparts. This may reflect the fact that the large majority of subtropical fish species are omnivores (i.e., feed on more than one trophic level) and have a strong degree of feeding niche overlap. The shapes of the food webs of the subtropical lakes (truncated and trapezoidal) suggest that they are fuelled by a combination of different energy pathways. In contrast, temperate lake food webs tended to be more triangular, likely as a result of more simple pathways with a top predator integrating different carbon sources. The effects of such differences on ecosystem functioning and stability, and the connection with ambient temperature as a major underlying factor, are, however, still incipiently known. [ABSTRACT FROM AUTHOR]

Multi-indicator palaeoecological studies have become increasingly popular over the last decade as the need for a more complete understanding of lake ecological histories has increased. However, the true potential of the full biological record for assessing the potential drivers of observed ecological shifts in lake sediment records has rarely been demonstrated., Here, we examine the remains of a range of food-web components including algae (diatoms), macrophytes (plant macrofossils), zooplankton (chitinous and ephippial Cladocera remains), invertebrates (including chironomids, bryozoans, Mollusca) and fish (fish scales and fish leech egg cocoons) in multiple sediment cores from Groby Pool, an enriched English shallow lake, to assess whole-ecosystem response to eutrophication over the last two centuries. We focus on three striking changes in the palaeorecord, namely the post-1900 increase in Daphnia spp., the post-1840 decline in Cristatella mucedo and the post-1940 increase in Cocconeis placentula, and utilise the multi-indicator palaeoecological data to evaluate possible explanations for these patterns., Principal curves analysis revealed marked and broadly simultaneous changes in the plant macrofossils, cladocerans, diatoms and chironomids (as well as in other animal remains such as bryozoans and Mollusca), indicating an early period of enrichment most likely associated with land-use change in the late 18th century, followed by a more recent eutrophication phase coincident with the discharge of sewage effluent to the lake from 1935., Ecological change, resulting from eutrophication, was shown to have progressed slowly and steadily and to have occurred at all trophic levels with a shift from a relatively diverse 'mesotrophic' macrophyte assemblage, dominance by benthic diatoms and plant-associated Chydoridae and chironomids towards a relatively species-poor, 'eutrophic' macrophyte community with dominance by planktonic algae (e.g. Cyclostephanoid diatom taxa), planktonic Cladocera ( Bosmina, Daphnia) and a chironomid fauna dominated by mud-associated taxa. The inferred shift in the macrophyte community from charophyte to fine-leaved pondweed and Callitriche truncata suggests a reduction in the seasonal duration of plant dominance., The multi-indicator analysis indicates that a combination of increased phytoplankton biomass and low zooplanktivorous fish predation is likely to explain the recent increases in Daphnia spp., while loss of plant habitat and increased competition for food appear to be the most likely causes of the observed decline in C. mucedo, and resistance to increased grazing pressure from invertebrates is the most probable driver of the C. placentula increase., Our study illustrates the potential of using the full array of fossil groups preserved in lake sediment cores to infer ecosystem dynamics over centennial timescales and to contribute to our understanding of the mechanisms that may link biological assemblages to a range of forcing factors. Further, this paper provides methodological guidance by demonstrating the ability of amalgamated records from three cores to reveal a strong sequence of events and coherent patterns. [ABSTRACT FROM AUTHOR]

Aquatic macrophytes are commonly used to assess the ecological condition of lakes. Little is known, however, about long-term macrophyte dynamics in shallow lakes. In the absence of historical data, the remains of macrophytes (fruits, seeds and vegetative fragments) found in lake sediments may provide just such information. In order to interpret confidently past change in aquatic plant communities from their sedimentary remains, it is vital to establish the similarity between the contemporary and fossil assemblages., We investigated the relationship between present lake vegetation and plant macrophyte remains in surface sediments. Thirty-five shallow lakes, spanning around six degrees of latitude and mostly located in the semi-arid Mediterranean climatic zone of Turkey, were sampled for aquatic plants, surface sediment plant remains and a range of other key environmental variables., Around 50% of the taxa recorded in the modern vegetation were represented in the sediment. Sedimentary macrofossils of some taxa were under- or over-represented relative to their frequency in the modern vegetation, for example Potamogeton spp. and Characeae, respectively. Despite this disparity, there was good agreement between the assemblage composition of the modern and sedimentary samples. Furthermore, conductivity and trophic state (as indicated by total nitrogen, total phosphorus and chlorophyll- a) were the environmental variables most clearly correlated with both the contemporary and macrofossil assemblages in these lakes., We conclude that aquatic macrophyte macrofossils can be used as reliable indicators of ecological status and to determine qualitative changes in assemblages of aquatic plants consequent to environmental change (e.g. in lake trophic status and/or salinity). This may be especially useful for lakes in arid and semi-arid Mediterranean regions, which are particularly vulnerable to hydrological constraints under climate change. [ABSTRACT FROM AUTHOR]

1. Palaeolimnology and contemporary ecology are complementary disciplines but are rarely combined. By reviewing the literature and using a case study, we show how linking the timescales of these approaches affords a powerful means of understanding ecological change in shallow lakes. 2. Recently, palaeolimnology has largely been pre-occupied with developing transfer functions which use surface sediment-lake environment datasets to reconstruct a single environmental variable. Such models ignore complex controls over biological structure and can be prone to considerable error in prediction. Furthermore, by reducing species assemblage data to a series of numbers, transfer functions neglect valuable ecological information on species’ seasonality, habitat structure and food web interactions. These elements can be readily extracted from palaeolimnological data with the interpretive assistance of contemporary experiments and surveys. For example, for one shallow lake, we show how it is possible to infer long-term seasonality change from plant macrofossil and fossil diatom data with the assistance of seasonal datasets on macrophyte and algal dynamics. 3. On the other hand, theories on shallow lake functioning have generally been developed from short-term (<1–15 years) studies as opposed to palaeo-data that cover the actual timescales (decades–centuries) of shallow lake response to stressors such as eutrophication and climate change. Palaeolimnological techniques can track long-term dynamics in lakes whilst smoothing out short-term variability and thus provide a unique and important means of not only developing ecological theories, but of testing them. 4. By combining contemporary ecology and palaeolimnology, it should be possible to gain a fuller understanding of changing ecological patterns and processes in shallow lakes on multiple timescales. [ABSTRACT FROM AUTHOR]

1. Eutrophication has a profound effect on the biological structure and function of shallow lakes, altering the composition and abundance of submerged macrophyte and fish assemblages. Relatively little is known, however, about decadal to centennial-scale change in these important aspects of shallow lake ecology. 2. Established palaeolimnological inference models are limited to reconstructing a single variable. As macrophyte and zooplanktivorous fish abundance exert dual and interacting controls on cladoceran assemblages a single variable inference model may contain significant error. To obviate this problem, we applied a new cladoceran-based multivariate regression tree (MRT) model to cladoceran subfossil assemblages from dated cores from a small shallow lake (Felbrigg Lake, U.K.) to assess long-term change in fish and submerged macrophyte abundance. Plant macrofossil, chironomid and mollusc subfossil assemblages were also analysed to track changes in biological structure and function and to evaluate the inferences of the MRT model. 3. Over the 200+ year period covered by the sediment cores, there was good agreement in the timing and nature of ecological change reflected by the plant macrofossil, mollusc, chironomid and cladoceran data. The sediment sequence was divided into three dated zones: c. 1797–1890, c. 1890–1954 and c. 1954–present. Prior to 1890 plant-associated mollusc, cladoceran and chironomid assemblages indicated a species-rich macrophyte community; a scenario confirmed by the plant macrofossil data. From c. 1890 to 1954 macrophyte-associated species of all three invertebrate groups remained abundant but the proportion of pelagic cladocerans rose. Post-1954 mollusc and chironomid assemblages changed to sediment associated detrital feeders and the proportion of pelagic cladoceran taxa increased further. 4. The cladoceran-based MRT model indicated a long period of stability, c. 1790–1927, characterised by abundant submerged macrophytes and zooplanktivorous fish. From c. 1927 to 1980, the MRT model inferred a decline in zooplanktivorous fish density (ZF) but relative stability in August macrophyte abundance. From 1980 to 2000, an increase in zooplanktivorous fish was inferred tallying well with available data on the fish population (since the 1970s), which indicated extirpation of perch in the 1970s and a subsequent increase in the rudd population. The model inferred little change in August macrophyte abundance until post- c. 1980 at which point it indicated a decline. The surface sediment assemblage was placed in MRT group A, where submerged plants are absent or very rare in late summer in good agreement with current conditions at the site. 5. The MRT model, applied here for the first time, appears to have successfully tracked changes in macrophyte abundance and ZF over the last 200 years at Felbrigg Lake. The inferences agreed with historical observations on the fish community and the supporting palaeolimnological data. Given that multiple structuring forces shape most biological communities, the application of a model capable of allowing for this represents a significant advance in palaeolimnology. [ABSTRACT FROM AUTHOR]

1. Shallow lakes are often cited as classic examples of systems that exhibit trophic cascades but, whilst they provide good model systems with which to test general ecological theory and to assess long-term community change, their food web linkages have rarely been resolved, so changes associated with the structure and dynamics of the ecological network as a whole are still poorly understood. 2. We sought to redress this, and to demonstrate the potential benefits of integrating palaeolimnological and contemporary data, by constructing highly resolved food webs and stable isotope derived measures of trophic interactions and niche space, for the extant communities of two shallow U.K. lakes from different positions along a gradient of eutrophication. The contemporary surface sediment cladoceran and submerged macrophyte assemblages in the less enriched site, Selbrigg Pond, matched the palaeolimnological assemblages of the more enriched site, Felbrigg Hall Lake, in its more pristine state during the 1920s. Thus, Selbrigg was a temporal analogue for Felbrigg, from which the consequences of long-term eutrophication on food web structure could be inferred. These data represent the first steps towards reconstructing not only past assemblages (i.e. nodes within a food web), but also past interactions (i.e. links within a food web): a significant departure from much of the previous research in palaeolimnology. 3. The more eutrophic food web had far fewer nodes and links, and thus a less reticulate network, than was the case for the more pristine system. In isotopic terms, there was vertical compression in δ15N range (NR) and subsequent increased overlap in isotopic niche space, indicating increased trophic redundancy within Felbrigg. This structural change, which was associated with a greater channelling of energy through a smaller number of nodes as alternative feeding pathways disappear, could lead to reduced dynamic stability, pushing the network towards further simplification. These changes reflected a general shift from a benthic-dominated towards a more pelagic system, as the plant-associated subweb eroded. 4. Although these data are among the first of their kind, the palaeo-analogue approach used here demonstrates the huge potential for applying food web theory to understand how and why these ecological networks change during eutrophication. Furthermore, because of the rich biological record preserved in their sediments, shallow lakes represent potentially important models for examining long-term intergenerational dynamics, thereby providing a means by which models and data can be integrated on meaningful timescales – a goal that has long proved elusive in food web ecology. [ABSTRACT FROM AUTHOR]

1. To correctly interpret chironomid faunas for palaeoenvironmental reconstruction, it is essential that we improve our understanding of the relative influence of ecosystem variables, biotic as well as physicochemical, on chironomid larvae. To address this, we analysed the surface sediments from 39 shallow lakes (29 Norfolk, U.K., 10 Denmark) for chironomid head capsules, and 70 chironomid taxa (including Chaoborus) were identified. 2. The shallow lakes were selected over large environmental gradients of aquatic macrophytes, total phosphorus (TP) and fish communities. Redundancy analysis (RDA) identified two significant variables that explained chironomid distribution: macrophyte species richness ( P < 0.001) and TP ( P < 0.005). Generalised linear models (GLM) identified specific taxa that had significant relationships with both these variables. Macrophyte percentage volume infested (PVI) and species richness were significant in classifying the lake types based on chironomid communities undertwinspan analysis, although other factors, notably nutrient concentrations and fish communities, were also important, illustrating the complexities of classifying shallow lake ecosystems. Lakes with plant species richness >10 all had relatively diverse (Hill’s N2) chironomid assemblages, and lakes with Hill’s N2 >10 all had TP <250 μg L−1 and total fish densities <2 fish per m2. 3. Plant density (PVI), and perhaps more importantly species richness, were primary controls on the distribution of chironomid communities within these lakes. This clearly has implications for palaeoenvironmental reconstructions using zoobenthos remains (i.e. chironomids) and suggests that they could be used to track changes in benthic/pelagic production and could be used as indicators of changing macrophyte habitat. 4. Measuring key biological gradients, in addition to physicochemical gradients, allowed the major controls on chironomid distribution to be assessed more directly, in terms of plant substrate, food availability, competition and predation pressure, rather than implying indirect mechanisms through relationships with nutrients. Many of these variables, notably macrophyte abundance and species richness, are not routinely measured in such studies, despite their importance in determining zoobenthos in temperate shallow lakes. 5. When physical, chemical and ecological gradients are considered, as is often the case with palaeo-reconstructions rather than training sets chosen to maximise one gradient, complex relationships exist, and attempting to reconstruct a single trophic variable quantitatively may not be appropriate or reliable. [ABSTRACT FROM AUTHOR]

1. Sedimentary remains of aquatic plants, both vegetative (turions, leaves, spines) and reproductive (fruits, seeds, pollen), may provide a record of temporal changes in the submerged vegetation of lakes. An independent assessment of the degree to which these remains reflect past floristic change is, however, rarely possible. 2. By exploiting an extensive series of historical plant records for a small shallow lake we compare plant macrofossil (three cores) and pollen (one core) profiles with the documented sequence of submerged vegetation change since c. 1750 AD. The data set is based on 146 site visits with 658 observations including 42 taxa classified as aquatic, spanning 250 years. 3. Approximately 40% of the historically recorded aquatic taxa were represented by macro-remains. In general macrofossils underestimated past species diversity, with pondweeds (three of eight historically recorded Potamogeton species were found) particularly poorly represented. Nonetheless, several taxa not reported from historical surveys (e.g. Myriophyllum alterniflorum and Characeae) were present in the sediment record. 4. The pollen record revealed taxa which left no macro-remains (e.g. Littorella uniflora), and the macrofossil record provided improved taxonomic resolution for some taxa (e.g. Potamogeton) and a more reliable record of persistence, appearance and loss of others (e.g. Myriophyllum spp. and Nymphaeaceae). 5. Detrended correspondence analysis indicated that changes in the community composition evidenced by the palaeolimnological and historical records were synchronous and of a similar magnitude. Both records pointed to a major change at around 1800, with the historical record suggesting a more abrupt change than the sedimentary data. There was good agreement on a subsequent change c. 1930. 6. The palaeolimnological data did not provide a complete inventory of historically recorded species. Nevertheless, these results suggest that combined macrofossil and pollen records provide a reliable indication of temporal change in the dominant components of the submerged and floating-leaved aquatic vegetation of shallow lakes. As such palaeolimnology may provide a useful tool for establishing community dynamics and successions of plants over decadal to centennial timescales. [ABSTRACT FROM AUTHOR]