24 results on '"Lücking, Robert"'
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2. Additional new species and new records of the genus Sticta (lichenised Ascomycota, lobarioid Peltigeraceae) from Bolivia.
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Ossowska, Emilia Anna, Moncada, Bibiana, Lücking, Robert, Flakus, Adam, Rodriguez-Flakus, Pamela, Olszewska, Sandra, and Kukwa, Martin
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ASCOMYCETES , *SPECIES , *GREEN algae , *THALLUS , *CILIA & ciliary motion - Abstract
Four species of the genus Sticta are described as new from Bolivia, based on morphological examination and phylogenetic analysis of the fungal ITS barcoding marker. Additionally, two species are reported as new to Bolivia (their identification confirmed by molecular data) and one previously reported species is confirmed by molecular data for the first time. Detailed morphological and anatomical descriptions are provided for all new species. Two of the new species, S. isidiolobulata Ossowska, B. Moncada, Lücking & Kukwa and S. madidiensis Ossowska, B. Moncada, Lücking & Kukwa belong to clade I, as defined in previous studies. In contrast, S. montepunkuensis Ossowska, B. Moncada, Lücking & Kukwa and S. macrolobata Ossowska, B. Moncada, Lücking & Kukwa, also described here as new to science, belong to clade III. Sticta isidiolobulata has an irregular to suborbicular thallus of medium size, with isidia developing into spathulate lobules, cyanobacterial photobiont and apothecia with entire to weakly-crenate margins. The large irregular thallus of the cyanobacteria-associated S. macrolobata has broad lobes, apothecia with verrucous to tomentose margins and cyphellae with raised margins, whereas S. madidiensis has a medium-sized, palmate to irregular thallus with a stipe, but without vegetative propagules and apothecia. Sticta montepunkuensis has large and irregular thalli with green algae as photobiont, apothecia with crenate to verrucous margins and urceolate cyphellae with a wide pore and a scabrid basal membrane. Two species, S. beauvoisii Delise and S. riparia Merc.-Díaz are reported as new to Bolivia (the latter also as new to South America) and belong to clade III. Sticta tomentosa (Sw.) Ach., species confirmed from Bolivia by molecular data, belongs to clade II. Sticta beauvoisii is characterised by a smooth yellowish-brown upper surface with darker apices and abundant, marginal isidia and a brown lower surface with golden-chocolate brown primary tomentum and sparse, golden-brown rhizines. Sticta riparia has a strongly branched thallus, with undulate lobes and abundant, marginal, palmate, grey to dark brown phyllidia and greyish-brown lower surface with the primary tomentum absent towards the margins. Sticta tomentosa has palmate, bluish thalli with white cilia and abundant, submarginal apothecia and creamy-white lower surface with a sparse, white primary tomentum. [ABSTRACT FROM AUTHOR]
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- 2024
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3. Resolving the species of the lichen genus Graphina Müll. Arg. in China, with some new combinations.
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Ze-Feng Jia and Lücking, Robert
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GRAPHIDACEAE , *LICHENS - Abstract
In the framework of continuing studies on the Graphidaceae in China, the status of all taxa traditionally assigned to the genus Graphina reported from China are resolved in the present paper. Five new combinations are made, namely Diorygma isabellinum (Zahlbr.) Z.F. Jia & Lücking, comb. nov., Fissurina adscribens (Nyl.) Z.F. Jia & Lücking, comb. nov., Graphis lecanactiformis (Zahlbr.) Z.F. Jia & Lücking, comb. nov., Phaeographis haloniata (Zahlbr.) Z.F. Jia & Lücking, comb. nov. and Platygramme taiwanensis (J.C. Wei) Z.F. Jia & Lucking, comb. nov. Five new synonymies were found: Graphina olivascens Zahlbr. (= Fissurina adscribens), Graphina plumbicolor Zahlbr. (= Phaeographis haloniata), Graphina roridula Zahlbr. and its variety platypoda Zahlbr. [= Diorygma pachygraphum (Nyl.) Kalb, Staiger & Elix], and Graphina taiwanensis f. obscurata J.C. Wei (= Platygramme taiwanensis). [ABSTRACT FROM AUTHOR]
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- 2017
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4. Resolving the genus Phaeographina Müll. Arg. in China.
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Ze-Feng Jia and Lücking, Robert
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LICHENS , *CRYPTOGAMS , *ASCOLICHENS , *CALICIALES , *GRAPHIDALES - Abstract
As part of ongoing studies of the lichen family Graphidaceae in China, the status of all taxa traditionally assigned to the genus Phaeographina reported from China is resolved in the present paper. Five new combinations are proposed: Phaeographis pleiospora (Zahlbr.) Z.F. Jia & Lücking, comb. nov., Platygramme elaeoplaca (Zahlbr.) Z.F. Jia & Lücking, comb. nov., Platythecium maximum (Groenh.) Z.F. Jia & Lücking, comb. nov., P. pyrrhochroa (Mont. & Bosch) Z.F. Jia & Lücking, comb. nov., and Sarcographina heterospora (Nyl.) Z.F. Jia & Lücking, comb. nov. Six new synonyms are established: Phaeographina callospora Zahlbr. [= Diorygma hieroglyphicum (Pers.) Staiger & Kalb], P. fukiensis Zahlbr. [= Pallidogramme chrysenteron (Mont.) Staiger, Kalb & Lücking], P. fukiensis var. substriata Zahlbr. [= Pallidogramme chrysenteron (Mont.) Staiger, Kalb & Lücking], P. granulans Zahlbr. [= Platygramme platyloma (Müll. Arg.) M. Nakan. & Kashiw.], P. pluvisilvarum Zahlbr. [= Graphis alpestris (Zahlbr.) Staiger], and P. valida Zahlbr. [= Thecographa prosiliens (Mont. & Bosch) A. Massal.]. Two additional synonyms are reported: Phaeographina subrigida (Nyl.) Zahlbr. is synonymized under Platygramme platyloma (Müll. Arg.) M. Nakan. & Kashiw., and Platythecium dimorphodes (Nyl.) Staiger under Platythecium pyrrhochroum (Mont. & Bosch) Z.F. Jia & Lücking. [ABSTRACT FROM AUTHOR]
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- 2017
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5. Three new lichen species from Nicaragua, with keys to the known species of Eugeniella and Malmidea.
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BREUSS, Othmar and LÜCKING, Robert
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LICHENS , *ASCOSPORES , *PLANT species , *ORGANIC acids - Abstract
Eugeniella palleola, Graphis paraschiffneri, and Malmidea cineracea are described from Nicaragua. Eugeniella palleola is characterized by having pale apothecial discs and prominent, white margins, and producing a complex chemistry including atranorin, stictic and norstictic acids, and an unknown substance. Graphis paraschiffneri has lirellae with a lateral thalline margin, striate labia, a completely carbonized excipulum, transversely septate ascospores, and contains norstictic acid in the thallus. Malmidea cineracea is characterized by a granulose-isidiate thallus with a yellowish medulla and a compact, crystal-encrusted excipulum. Malmidea nigromarginata and M. piperina are proposed as new combinations. Keys are presented to all known species of Eugeniella (9) and Malmidea (50). [ABSTRACT FROM AUTHOR]
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- 2015
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6. A single macrolichen constitutes hundreds of unrecognized species.
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Lücking, Robert, Dal-Forno, Manuela, Sikaroodi, Masoumeh, Gillevet, Patrick M., Bungartz, Frank, Moncada, Bibiana, Yánez-Ayabaca, Alba, Chaves, José Luis, Coca, Luis Fernando, and Lawrey, James D.
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LICHENS , *SPECIES , *FUNGI , *TAXONOMY , *FUNGI diversity - Abstract
The number of Fungi is estimated at between 1.5 and 3 million. Lichenized species are thought to make up a comparatively small portion of this figure, with unrecognized species richness hidden among little-studied, tropical microlichens. Recent findings, however, suggest that some macrolichens contain a large number of unrecognized taxa, increasing known species richness by an order of magnitude or more. Here we report the existence of at least 126 species in what until recently was believed to be a single taxon: the basidiolichen fungus Dictyonema glabratum, also known as Cora pavonia. Notably, these species are not cryptic but morphologically distinct. A predictive model suggests an even larger number, with more than 400 species. These results call into question species concepts in presumably well-known macrolichens and demonstrate the need for accurately documenting such species richness, given the importance of these lichens in endangered ecosystems such as paramos and the alarming potential for species losses throughout the tropics. [ABSTRACT FROM AUTHOR]
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- 2014
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7. Three new species of Graphis (Ascomycota: Ostropales: Graphidaceae) from Mexico, with updates to taxonomic key entries for 41 species described between 2009 and 2013.
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BARCENAS PEÑA, Alejandrina, LÜCKING, Robert, MIRANDA-GONZÁLEZ, Ricardo, and HERRERA-CAMPOS, María de los Angeles
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LICHENS , *BIODIVERSITY , *GRAPHIS (Lichens) , *GRAPHIDACEAE - Abstract
Three species of Graphis (Graphidaceae) are described from Mexico from two research stations of the Universidad Nacional Autónoma de México (UNAM): Chamela Biological Station in the Cuixmala-Chamela Biosphere Reserve, Jalisco, and Los Tuxtlas Tropical Biological Station in the Los Tuxtlas Biosphere Reserve, Veracruz. The new species Graphis bungartzii Barcenas-Peña, Lücking, Herrera-Campos & R. Miranda is characterized by erumpent lirellae with a lateral thalline margin, striate labia and laterally carbonized exciple, transversely septate ascospores, and norstictic and connorstictic acids. Graphis chamelensis Barcenas-Peña & Lücking has prominent lirellae with a basal to lateral thalline margin, entire labia and completely carbonized exciple, transversely septate ascospores, and norstictic acid. Finally, Graphis rosae-emiliae Barcenas-Peña & Lücking is characterized by erumpent lirellae with lateral thalline margin, striate labia and completely carbonized exciple, transversely septate ascospores, and no substances detected by TLC. We present updates to the world key to Graphis for 41 newly described or reinstated species since the world key was published in 2009. The following new combination is proposed: Pallidogramme parvicarpum (B. O. Sharma & Khadilkar) Lücking comb. nov., based on Graphis parvicarpa B. O. Sharma & Khadilkar. [ABSTRACT FROM AUTHOR]
- Published
- 2014
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8. Halegrapha (Ascomycota: Graphidaceae), an enigmatic new genus of tropical lichenized fungi dedicated to Mason E. Hale Jr.
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LÜCKING, Robert, RIVAS PLATA, Eimy, KALB, Klaus, COMMON, Ralph S., BARCENAS PEÑA, Alejandrina, and DUYA, Melizar V.
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LICHENS , *GRAPHIS (Lichens) , *CALCIUM oxalate , *ASCOSPORES - Abstract
The new genus Halegrapha is introduced, with six species (five new species and one new combination) from Australia, the Philippines, Malaysia, Kenya, Mexico, and the United States: H. chimaera Rivas Plata & Lücking (type species; Philippines), H. floridana Common & Lücking (United States: Florida), H. intergrapha Hale ex Lücking (Malaysia), H. kenyana Kalb & Lücking (Kenya), H. mexicana A. B. Peña & Lücking (Mexico), and H. mucronata (Stirt.) Lücking (Australia). The genus resembles Graphis morphologically in the strongly carbonized, black lirellae and white-grey thallus strongly encrusted with calcium oxalate crystals, but has a Phaeographis-type hymenium (clear in two species) and ascospores, making it a ‘chimera’ between the two genera. Molecular data suggest the genus to be closely related to Phaeographis and allies but genetically distinct from any of the genera currently recognized, including Platygramme. [ABSTRACT FROM AUTHOR]
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- 2011
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9. High diversification in the Neoprotoparmelia multifera complex (Ascomycota, Parmeliaceae) in northeast Brazil revealed by DNA barcoding and phenotypical characters.
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dos Santos, Lidiane Alves, Aptroot, André, Lücking, Robert, and da Silva Cáceres, Marcela Eugenia
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GENETIC barcoding , *ASCOMYCETES , *CHARACTER , *LICHENS - Abstract
Phylogenetic studies revealed a high level of diversity within the lichen-forming fungus so far identified with the name Maronina multifera (Protoparmelioideae, Parmeliaceae), currently accommodated in the genus Neoprotoparmelia. Here, six new species of Neoprotoparmelia are described as new to science based on morphological and molecular data, mostly from northeastern Brazil. The new species are: Neoprotoparmelia nigra (Brazil), with 32-spored asci, lacking alectoronic acid, and with pale, K-negative apothecial base, and blackish apothecial disc; N. paramultifera (Brazil), with 64-spored asci, alectoronic acid, pale, K-negative apothecial base, and purplish brown apothecial disc and thick apothecial margins; N. pseudomultifera (Brazil), with 32-spored asci, lacking alectoronic acid, and with pale, K-negative apothecial base and brown apothecial disc (no reddish or purplish tinge); N. purpurea (Brazil), with 32-spored asci, lacking alectoronic acid, and with pigmented, K+ purplish-violet apothecial base and purplish brown apothecial disc; N. rubrofusca (Colombia), with 32-spored asci, lacking alectoronic acid, and with pigmented, K+ purplish-violet apothecial base, and red-brown apothecial disc and thin, evanescent margins; and N. sexdecimspora (Brazil), with 16-spored asci, alectoronic acid, pale, K-negative apothecial base, and purplish brown apothecial disc. The name N. multifera is restricted to a species from the northern Andes with 64-spored asci, alectoronic acid, pale, K-negative apothecial base, and purplish brown apothecial disc with thin margins, while the new combination N. camptotheca is adopted for a species in eastern Brazil with 32-spored asci, alectoronic acid, pale, K-negative apothecial base, purplish brown apothecial disc, and smooth margin (all other species in the complex having crenulate margins). The following two new combinations are also proposed: Neoprotoparmelia saxicola and N. rogersii (syn.: N. capensis V.J.Rico, A.Crespo & Garima Singh). [ABSTRACT FROM AUTHOR]
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- 2019
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10. Molecular phylogeny resolves a taxonomic misunderstanding and places Geisleria close to Absconditella s. str. (Ostropales: Stictidaceae).
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APTROOT, André, PARNMEN, Sittiporn, LÜCKING, Robert, BALOCH, Elisabeth, JUNGBLUTH, Patricia, CÁCERES, Marcela E. S., and LUMBSCH, H. Thorsten
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MOLECULAR phylogeny , *FUNGAL phylogeny , *LICHENS , *OSTROPALES , *ASCOSPORES - Abstract
The phylogenetic position of the genus Geisleria and its type species G. sychnogonioides was reconstructed using sequence data of the mitochondrial small subunit (mtSSU), the nuclear large subunit rDNA (nuLSU) and the first subunit of the RNA polymerase (RPB1). The species, previously classified in Verrucariaceae (Eurotiomycetes) and Strigulaceae (Dothideomycetes), is sister to the type of the genus Absconditella, A. sphagnorum, and nested within the genera Absconditella and Cryptodiscus combined (which also includes the lichenized Bryophagus). At first glance it appears to be a further example of parallel evolution of perithecioid ascomata within Stictidaceae (Lecanoromycetes: Ostropales), besides Ostropa and Robergea, adding to the growing list of perithecioid forms nested within apothecioid lineages in Ostropomycetidae, and specifically Ostropales, with other examples known from Graphidaceae (several genera), Gyalectaceae (Belonia), and Porinaceae. However, revision of type material collected by Nitschke revealed that the species actually develops typical apothecia with a narrowly exposed disc. We conclude that Geisleria sychnogonoides was erroneously considered a pyrenocarpous taxon, because in dry conditions the apothecia are closed and not recognizable as such. The species usually grows on unstable soil and therefore often only develops young, more or less closed ascomata (yet with mature ascospores), and has also been confused with the superficially similar Belonia incarnata, in which the ascomata remain closed even when mature. Geisleriasychnogonioides has so far only been known as a rarely reported pioneer species from loamy soils in Europe and North America. Here it is reported to occur abundantly on lateritic soils in subtropical Brazil, suggesting that it is cosmopolitan and possibly common, but much overlooked. [ABSTRACT FROM AUTHOR]
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- 2014
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11. New combinations and names in Gyalecta for former Belonia and Pachyphiale (Ascomycota, Ostropales) species.
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BALOCH, Elisabeth, LUMBSCH, H. Thorsten, LÜCKING, Robert, and WEDIN, Mats
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ASCOMYCETES , *OSTROPALES , *BIOLOGICAL classification , *ZOOLOGICAL nomenclature - Abstract
Belonia and Pachyphiale were recently shown to be nested within Gyalecta. Here, new combinations and names are introduced for species earlier classified in Belonia: Gyalecta calcicola (Walt. Watson) Baloch & Lücking comb. nov., G. herculina (Rehm) Baloch, Lumbsch & Wedin comb. nov., G. incarnata (Th. Fr. & Graewe) Baloch & Lücking comb. nov., G. lumbrispora (Etayo) Baloch & Lücking comb. nov., G. lyngei Baloch & Lücking nom. nov. (for Belonia arctica Lynge), G. mediterranea (Nav.-Ros. & Llimona) Baloch & Lücking comb. nov., G. nidarosiensis (Kindt) Baloch & Lücking comb. nov., G. pellucida (Coppins & Malcolm) Baloch & Lücking comb. nov., G. russula (Körb. ex Nyl.) Baloch, Lumbsch & Wedin comb. nov., G. uncinata (P. M. McCarthy & Kantvilas) Baloch & Lücking comb. nov., and G. vezdana (Malcolm & Coppins) Baloch & Lücking comb. nov.; and for species earlier placed in Pachyphiale: Gyalecta arbuti (Bagl.) Baloch & Lücking comb. nov., G. gyalizella (Nyl.) Baloch & Lücking comb. nov., G. himalayensis (Vězda & Poelt) Baloch & Lücking comb. nov., and G. ophiospora (Bagl.) Baloch & Lücking comb. nov. [ABSTRACT FROM PUBLISHER]
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- 2013
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12. A new species of Chrysothrix (Arthoniales: Arthoniaceae) from India.
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Ram, T. A. M. Jagadeesh, Sinha, G. P., Lücking, Robert, and Lumbsch, H. Thorsten
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SPECIES , *LICHENS , *BIOLOGICAL classification , *MANGROVE plants , *ASCOSPORES ,SUNDARBAN Biosphere Reserve (India) - Abstract
A new species, Chrysothrix septemseptata, is described from India. It is characterized by 7-septate ascospores, which is unique within the genus. It is currently known only from the Sundarbans Biosphere Reserve, where it grows in mangrove plantations. [ABSTRACT FROM AUTHOR]
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- 2006
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13. A new species of Chrysothrix (Arthoniales: Arthoniaceae) from India.
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Ram, T. A. M. Jagadeesh, Sinha, G. P., Lücking, Robert, and Lumbsch, H. Thorsten
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SPECIES , *MANGROVE plants , *ASCOSPORES , *PLANT spores , *PLANTATIONS , *LICHENS , *COASTAL plants , *BIOLOGICAL classification ,SUNDARBAN Biosphere Reserve (India) - Abstract
A new species, Chrysothrix septemseptata, is described from India. It is characterized by 7-septate ascospores, which is unique within the genus. It is currently known only from the Sundarbans Biosphere Reserve, where it grows in mangrove plantations. [ABSTRACT FROM AUTHOR]
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- 2006
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14. Discoveries through social media and in your own backyard: two new species of Allographa (Graphidaceae) with pigmented lirellae from the Palaeotropics, with a world key to species of this group.
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JATNIKA, Muhammad Feisal, WEERAKOON, Gothamie, ARACHCHIGE, Omal, NOER, Iin Supartinah, VOYTSEKHOVICH, Anna, and LÜCKING, Robert
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SOCIAL media , *SOCIAL media in business , *SPECIES , *SPECIES distribution , *ASCOSPORES , *FRONT yards & backyards - Abstract
The genus Graphis sensu Staiger was recently divided into two genera, Graphis s. str. and Allographa. The latter contains mostly species with robust lirellae with a well-developed, often massively carbonized excipulum. With one exception, it also contains all species with a pigmented, yellow to orange pruina on the lirellae. Until now, seven species of Allographa were known with this character, all present in the Neotropics and one also in Africa. Here we describe two further species, both from tropical Asia, thus extending the known distribution of Allographa species with pigmented lirellae to the entire tropics. Allographa kamojangensis Jatnika, Noer & Lücking sp. nov. from Indonesia (Java) was recognized as a new taxon on the social media Facebook site Lichens Connecting People. Detailed studies showed that it deviates from the neotropical A. firferi in the much larger ascospores and the orange, K+ immediately purple-violet pigment, and from A. lutea in the completely carbonized excipulum and the larger ascospores. Allographa jayatilakana Weerakoon, Arachchige & Lücking sp. nov. was discovered in the second author's backyard during a recent inventory of Graphidaceae in Sri Lanka. It differs from A. flavominiata in the much shorter ascospores, from A. firferi in the terminally muriform ascospores, and from A. ochracea in the yellow-orange, K+ yellow then slowly purple-violet pruina. A key is presented to all nine species of Allographa with pigmented lirellae. [ABSTRACT FROM AUTHOR]
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- 2019
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15. Five new species of Graphidaceae (Ascomycota, Ostropales) from Thailand.
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Naksuwankul, Khwanyuruan, Kraichak, Ekaphan, Parnmen, Sittiporn, Lücking, Robert, and Lumbsch, H. Thorsten
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GRAPHIDACEAE , *ASCOMYCETES - Abstract
Five new species of Graphidaceae are described from Thailand. Molecular evidence and phenotypical characters support their independent status from related and similar species. Glaucotrema thailandicum Naksuwankul, Lücking & Lumbsch is unique within the genus in having submuriform ascospores. Ocellularia klinhomii Naksuwankul, Lücking & Lumbsch is characterized by having a whitish gray, rimose thallus with ascomata in verrucae and surrounded by a black ring and lack of secondary metabolites. Ocellularia phatamensis Naksuwankul, Parnmen & Lumbsch has a grayish, thick and rimose thallus, differing from O. klinhomii in lacking a dark apothecial rim and having ascomata that are not immersed in verrucae. Ocellularia thailandica Naksuwankul, Kraichak & Lumbsch differs from O. albocincta in lacking a columella. Ocellularia rotundifumosa Naksuwankul, Lücking & Lumbsch differs from O. fumosa in having ascospores with rounded ends. An epitype for O. krathingensis is selected. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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16. Sulzbacheromyces caatingae: notes on its systematics, morphology and distribution based on ITS barcoding sequences.
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SULZBACHER, Marcelo A., WARTCHOW, Felipe, OVREBO, Clark L., SOUSA, Julieth O., BASEIA, Iuri G., MONCADA, Bibiana, and LÜCKING, Robert
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GENETIC barcoding , *BASIDIOMYCETES , *FUNGI classification , *BIOMARKERS , *LICHENS - Abstract
Sulzbacheromyces is a recently erected genus in Lepidostromatales, differing from Lepidostroma in the crustose thallus. After the initial discovery of S. caatingae, the only species to be found in Brazil so far, a large quantity of additional data and ITS barcoding sequences for this taxon from a much broader geographical range and different habitats was collected. Phylogenetic analysis under a maximum likelihood framework demonstrated that all specimens are genetically uniform, showing no variation in their ITS, suggesting that S. caatingae has a wide ecological amplitude beyond the Brazilian Caatinga and Atlantic Forest biomes. Detailed descriptions and illustrations of the species are presented, including a map showing the distribution of S. caatingae in the Brazilian semi-arid region and the north-eastern Atlantic rainforest. [ABSTRACT FROM PUBLISHER]
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- 2016
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17. Melaspilea demissa (Tuck.) Zahlbr. (lichenized Ascomycota) in eastern North America with a key to North American species of Melaspilea s. lat.
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Perlmutter, Gary B., Tucker, Shirley C., Rivas Plata, Eimy, Clerc, Philippe, and Lücking, Robert
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SYMPATRIC speciation , *BIOLOGICAL classification , *SPECIES hybridization , *GENETICS - Abstract
Recently collected specimens of the crustose lichen Melaspilea demissa from south-eastern USA have been compared with those of Melaspilea spp. previously determined from North America. A review of both the historical and contemporary treatments of this species is provided. A lectotype was selected from the type collection of M. demissa in FH and is here proposed as it best matches incomplete citations in the original treatment. We also discuss the nomenclatural and taxonomic status of the name Opegrapha cymbiformis var. deformis (considered a synonym of M. gibberulosa). North American specimens of M. gibberulosa were found to be misidentifications, as were specimens attributed to M. lentiginosula, M. mesophlebia and M. octomera. We therefore recommend that these species be removed from the North American lichen checklist. We also present a key to North American Melaspilea. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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18. Molecular data support Pseudoparmelia as a distinct lineage related to Relicina and Relicinopsis (Ascomycota, Lecanorales).
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BUARUANG, Kawinnat, SCHARNAGL, Klara, DIVAKAR, Pradeep, LEAVITT, Steven D., CRESPO, Ana, NASH, Thomas H., MANOCH, Leka, LÜCKING, Robert, and LUMBSCH, H. Thorsten
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PSEUDOPARMELIA , *PLANT species , *PARMELIACEAE , *PLANTS , *THALLUS - Abstract
The phylogenetic position of the genus Pseudoparmelia was addressed using molecular data from five loci (mtSSU, nuLSU, ITS, Mcm7, RPB1), generated from three species and aligned with sequences from 293 samples representing all major clades of Parmeliaceae. Pseudoparmelia species form a well-supported monophyletic group that is the sister group of a clade consisting of the genera Relicina and Relicinopsis. These three genera share a thallus with a pored epicortex, isolichenan as cell wall polysaccharide, and relatively small ascospores. Morphological and chemical characters that distinguish Pseudoparmelia from the closely related Relicina and Relicinopsis are discussed. To further elucidate the relationships of these three genera, we assembled a second dataset including 15 additional samples of Relicina and Relicinopsis using three loci (mtSSU, nuLSU, ITS). All three genera are monophyletic but monophyly of Relicina lacks support and, in the mtSSU single locus tree, the genus is paraphyletic with Relicinopsis nested within. Additional studies including more Relicina species are necessary to test delimitation of the genera Relicina and Relicinopsis. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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19. High frequency of character transformations is phylogenetically structured within the lichenized fungal family Graphidaceae (Ascomycota: Ostropales).
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Lumbsch, H. Thorsten, Parnmen, Sittiporn, Kraichak, Ekaphan, Papong, Khwanruan Butsatorn, and Lücking, Robert
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LICHENS , *MOLECULAR phylogeny , *TAXONOMY , *GRAPHIDACEAE , *FUNGAL anatomy - Abstract
Graphidaceae is a large family of over 2000 predominantly tropical, lichenized fungal species encompassing a remarkable range of morphological and chemical diversity. The majority of species belongs in subfamily Graphidoideae, which also exhibits the greatest amount of variation. Various phenotype characters have traditionally been used for classification at the genus and species levels, but their correlations with phylogenetic clades are poorly known. Using a multilocus approach, we reconstructed a phylogeny for 224 taxa, representing all main genera within subfamily Graphidoideae, and employed ancestral character reconstruction and character transformation analyses to understand the evolution of morphological, anatomical and chemical characters within this group. In addition, we examined the changes of habitat and photobiont types over the phylogeny. For this purpose, we focused on 10 characters, including thallus and ascoma features and chemistry. Since previous studies have shown that results may differ depending on the reconstruction method used, both Maximum-parsimony and Maximum-likelihood approaches were employed and multistate coding of characters was used. We reconstructed the ancestral states for 64 well-supported major clades in the family and found support for the ancestor of Graphidoideae being a tropical species with a trentepohlioid photobiont, apothecioid, solitary ascomata lacking both a columella and lateral paraphyses, and having non-amyloid ascospores. The frequency of transformations of morphological and chemical characters over the phylogeny of Graphidaceae was computed, resulting in a high frequency of reversible transformations for some characters, such as secondary chemistry, whereas other characters, such as photobiont, hymenial persistence or ascoma aggregation, exhibited low frequency of transformations. However, we found that even in the character with the highest number of transformations, secondary chemistry, the shifts were highly structured phylogenetically, suggesting that the evolution of the character, rather than the character state itself, can be used to predict phylogenetic relationships with certain accuracy. [ABSTRACT FROM PUBLISHER]
- Published
- 2014
- Full Text
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20. New and interesting lichens from the Caxiuanã National Forest in the Brazilian Amazon.
- Author
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SILVA CÁCERES, Marcela Eugenia da, SANTOS VIEIRA, Tamires dos, DE JESUS, Luciana Santos, and LÜCKING, Robert
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LICHENS , *FOREST reserves , *FUNGI , *GRAPHIDACEAE , *BIOLOGICAL classification - Abstract
As part of an ongoing inventory of the lichenized mycota of the Caxiuanã National Forest, at Ferreira Penna Research Station in the Brazilian Amazon, two species of lichenized fungi are described as new and four new combinations are introduced: Ampliotrema megalostoma (Müll. Arg.) M. Cáceres & Lücking comb. nov., Graphis brachylirellata M. Cáceres & Lücking sp. nov., Malmidea leucogranifera M. Cáceres & Lücking sp. nov., Ocellularia conformalis (Kremp.) M. Cáceres & Lücking comb. nov., Redingeria microspora (Zahlbr.) M. Cáceres & Lücking comb. nov., and Sarcographa megistocarpa (Leight.) M. Cáceres & Lücking comb. nov. [ABSTRACT FROM AUTHOR]
- Published
- 2012
- Full Text
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21. A new circumscription of the genus Varicellaria (Pertusariales, Ascomycota).
- Author
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Schmitt, Imke, Otte, Jürgen, Parnmen, Sittiporn, Sadowska-Deś, Anna D., Lücking, Robert, and Lumbsch, H. Thorsten
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LICHENS , *ASCOMYCETES , *RECOMBINANT DNA research , *PERTUSARIACEAE , *ASCOSPORES - Abstract
The lichen-forming genus Pertusaria under its current circumscription is polyphyletic and its phylogenetic ailiations are uncertain. Here we study the species of the genera Pertusaria and Varicellaria which contain lecanoric acid as major constituent, have disciform apothecia, strongly amyloid asci, non-amyloid hymenial gel, 1-2-spored asci, and 1- or 2-celled ascospores with thick, 1-layered walls. We infer phylogenetic relationships using maximum likelihood and Bayesian analyses based on four molecular loci (mtSSU, nuLSU rDNA, and the protein-coding, nuclear RPB1 and MCM7 genes). Our results show that the lecanoric acid-containing species form a well-supported, monophyletic group, which is only distantly related to Pertusaria s.str. he phylogenetic position of this clade is unclear, but placement in Pertusaria s.str. is rejected using alternative hypothesis testing. he circumscription of the genus Varicellaria is enlarged to also include species with non-septate ascospores. Seven species are accepted in the genus: Varicellaria culbersonii (Vezda) Schmitt & Lumbsch, comb. nov., V. hemisphaerica (Flörke) Schmitt & Lumbsch, comb. nov., V. kasandjeii (Szatala) Schmitt & Lumbsch, comb. nov., V. lactea (L.) Schmitt & Lumbsch, comb. nov., V. philippina (Vain.) Schmitt & Lumbsch, comb. nov., V. rhodocarpa (Körb.) h. Fr., and V. velata (Turner) Schmitt & Lumbsch, comb. nov. A key to the species of Varicellaria is provided. [ABSTRACT FROM AUTHOR]
- Published
- 2012
- Full Text
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22. Three new species of Chapsa (lichenized Ascomycota: Ostropales: Graphidaceae) from tropical Asia.
- Author
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WEERAKOON, Gothamie, RIVAS PLATA, Eimy, LUMBSCH, H. Thorsten, and LÜCKING, Robert
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LICHENS , *ASCOMYCETES , *OSTROPALES , *GRAPHIDACEAE , *APOTHECIUM , *BIOLOGICAL classification - Abstract
Three new species of Chapsa in the family Graphidaceae are described from tropical Asia. Chapsa mastersonii Rivas Plata, Lumbsch & Lücking from the Philippines is characterized by large apothecia with thickly white-pruinose discs, large, muriform, non-amyloid ascospores, and the stictic acid chemosyndrome. Chapsa wijeyaratniana Weerakon, Lumbsch & Lücking from Sri Lanka has apothecia similar to the preceding species but forms an ecorticate thallus with maculiform to capitate soralia, has small, submuriform ascospores, and lacks secondary substances. Chapsa wolseleyana Weerakon, Lumbsch & Lücking forms apothecia with red to pinkish or purplish red discs and large, muriform ascospores becoming pale brown. [ABSTRACT FROM AUTHOR]
- Published
- 2012
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23. A survey of thelotremoid lichens (Ascomycota: Ostropales) in subantarctic regions excluding Tasmania.
- Author
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Lumbsch, H. Thorsten, Divakar, Pradeep K., Messuti, Marìa Inés, Mangold, Armin, and Lücking, Robert
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LICHENS , *LANDFORMS , *DYE plants , *PLANT spores - Abstract
Thelotremoid lichens (Ostropales, Ascomycota) with a trentepohlioid photobiont in Tierra del Fuego, the Falkland Islands, the South Island of New Zealand, and subpolar islands of the southern Hemisphere are studied. Twenty-five species are accepted, with three species described as new to science: Melanotopelia blepharostoma Lumbsch & Divakar, Topeliopsis athallina Lumbsch & Mangold and Topeliopsis patagonica Mangold & Lumbsch. The new combination Topeliopsis novaezelandiae (Szatala) Lumbsch & Mangold is proposed. [ABSTRACT FROM AUTHOR]
- Published
- 2010
- Full Text
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24. A higher-level phylogenetic classification of the Fungi
- Author
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Hibbett, David S., Binder, Manfred, Bischoff, Joseph F., Blackwell, Meredith, Cannon, Paul F., Eriksson, Ove E., Huhndorf, Sabine, James, Timothy, Kirk, Paul M., Lücking, Robert, Thorsten Lumbsch, H., Lutzoni, François, Matheny, P. Brandon, McLaughlin, David J., Powell, Martha J., Redhead, Scott, Schoch, Conrad L., Spatafora, Joseph W., Stalpers, Joost A., and Vilgalys, Rytas
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FUNGI , *PHYLOGENY , *TAXONOMY , *BASIDIOMYCOTA , *CHYTRIDIOMYCETES - Abstract
Abstract: A comprehensive phylogenetic classification of the kingdom Fungi is proposed, with reference to recent molecular phylogenetic analyses, and with input from diverse members of the fungal taxonomic community. The classification includes 195 taxa, down to the level of order, of which 16 are described or validated here: Dikarya subkingdom nov.; Chytridiomycota, Neocallimastigomycota phyla nov.; Monoblepharidomycetes, Neocallimastigomycetes class. nov.; Eurotiomycetidae, Lecanoromycetidae, Mycocaliciomycetidae subclass. nov.; Acarosporales, Corticiales, Baeomycetales, Candelariales, Gloeophyllales, Melanosporales, Trechisporales, Umbilicariales ords. nov. The clade containing Ascomycota and Basidiomycota is classified as subkingdom Dikarya, reflecting the putative synapomorphy of dikaryotic hyphae. The most dramatic shifts in the classification relative to previous works concern the groups that have traditionally been included in the Chytridiomycota and Zygomycota. The Chytridiomycota is retained in a restricted sense, with Blastocladiomycota and Neocallimastigomycota representing segregate phyla of flagellated Fungi. Taxa traditionally placed in Zygomycota are distributed among Glomeromycota and several subphyla incertae sedis, including Mucoromycotina, Entomophthoromycotina, Kickxellomycotina, and Zoopagomycotina. Microsporidia are included in the Fungi, but no further subdivision of the group is proposed. Several genera of ‘basal’Fungi of uncertain position are not placed in any higher taxa, including Basidiobolus, Caulochytrium, Olpidium, and Rozella. [Copyright &y& Elsevier]
- Published
- 2007
- Full Text
- View/download PDF
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