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The efficient utilization of lignocellulosic hydrolysates in bioprocesses is impeded by their complex composition and the presence of toxic compounds, such as furan aldehydes, formed during lignocellulose pretreatment. Biological detoxification of these furan aldehydes offers a promising solution to enhance the utilization of lignocellulosic hydrolysates. Acinetobacter baylyi ADP1 is known to metabolize furan aldehydes, yet the complete spectrum of reaction products and dynamics remains unclear. Here, we determined the detoxification metabolites of furfural and 5-hydroxymethylfurfural in A. baylyi ADP1 and studied the kinetics of detoxification. The results indicate that detoxification in A. baylyi ADP1 follows a typical alcohol-aldehyde-acid scheme, with furoic acid and 5-hydroxymethyl-2-furancarboxylic acid as the final products for furfural and 5-hydroxymethylfurfural, respectively. Both end products were found to be less toxic for cells than their unmodified forms. These findings underscore the potential of A. baylyi ADP1 in detoxifying lignocellulosic hydrolysates for bioprocess applications. [ABSTRACT FROM AUTHOR]

Abstract Biodetoxification fungus selectively degrades toxic inhibitors generated from pretreatment of lignocellulose without consuming fermentable sugars. However, one barrier for practical application is the sustained cell viability in the consequent fermentation step to compete the fermentable sugars with fermenting strains, resulting in sugar loss and reduced target product yield. This study investigated the competitive growth property between the biodetoxification fungus Paecilomyces variotii FN89 and the L-lactic acid bacterium Pediococcus acidilactici ZY271 under varying temperature and lactic acid osmatic stress. The results show that the L-lactic acid bacterium Ped. acidilactici ZY271 showed less thermotolerance to Pae. variotii FN89 at high temperature of 45 °C to 50 °C in both synthetic medium and wheat straw hydrolysate. In the higher temperature environment, the growth of the biodetoxification strian failed to compete with the lactic acid fermentation strain and was quickly eliminated from the fermentation system. The high temperature fermentation facilitated a fast transition from the detoxification stage to the fermentation stage for higher production of L-lactic acid.

Biodetoxification fungus selectively degrades toxic inhibitors generated from pretreatment of lignocellulose without consuming fermentable sugars. However, one barrier for practical application is the sustained cell viability in the consequent fermentation step to compete the fermentable sugars with fermenting strains, resulting in sugar loss and reduced target product yield. This study investigated the competitive growth property between the biodetoxification fungus Paecilomyces variotii FN89 and the L-lactic acid bacterium Pediococcus acidilactici ZY271 under varying temperature and lactic acid osmatic stress. The results show that the L-lactic acid bacterium Ped. acidilactici ZY271 showed less thermotolerance to Pae. variotii FN89 at high temperature of 45 °C to 50 °C in both synthetic medium and wheat straw hydrolysate. In the higher temperature environment, the growth of the biodetoxification strian failed to compete with the lactic acid fermentation strain and was quickly eliminated from the fermentation system. The high temperature fermentation facilitated a fast transition from the detoxification stage to the fermentation stage for higher production of L-lactic acid. [ABSTRACT FROM AUTHOR]

[Display omitted] • Two ALE methods were designed to boost the biodetoxification of P. variotii. • The evolved strain showed stronger degradation on high titers inhibitors. • The evolved strains showed upregulation of adh , acs , ach1 , and ackA. • Furfural residues were successfully bioconverted to lactic acid. High inhibitor concentrations in lignocellulose feedstock negatively affect the degradation rate of biodetoxification strains. This study designed two adaptive laboratory evolutions in solid substrate and liquid medium to boost the biodetoxification capacity of P. variotii to high titers of lignocellulose-derived inhibitors, resulting in two evolved strains AC70 and ZW70. The results showed that the evolutionary adaptation in liquid medium could better boost the acetic acid assimilation compared to that on solid substrate. Transcriptional analysis revealed that the evolved strains exhibited a significant upregulation of adh , acs , ach1 , and ackA directly related to the initial steps of acetate and furan aldehydes metabolisms. ZW70 strain can effectively remove the high concentration inhibitors cocktail from the hydrolysates derived from pretreated wheat straw and furfural residues. The biodetoxified hydrolysates by ZW70 were successfully used for cellulose chiral L-lactic acid production with the titers of ∼110 g/L, which were over 20 % higher than that detoxified by parental strain. [ABSTRACT FROM AUTHOR]

Dilute acid hydrolysis of lignocellulose biomass had been used for production of cellulosic ethanol since 1940 s. The major technical barrier is the acid catalyzed dehydration of monosaccharides to furan aldehydes (furfural and 5-hydroxymethylfurfural), resulting in the high loss of fermentable sugars and significant inhibition on the fermentability of ethanologenic strains. This study re-examined the dilute acid hydrolysis of corn stover and cellulosic ethanol fermentation after a novel biodetoxification approach was introduced to de-bottleneck the inhibitor barrier. The cocktail of sulfuric acid, phosphoric acid and oxalic acid hydrolyzed corn stover to the 51.1 g/L of glucose (0.50 g/g cellulose) and 18.1 g/L of xylose (0.22 g/g xylan). The furfural, 5-hydroxymethylfurfural and acetic acid in the corn stover hydrolysate were completely removed by Paecilomyces variotii FN89, leading to the successful ethanol fermentation of 24.2 g/L, corresponding to 72.6 kg per metric ton of dry corn stover. No wastewater streams, solid wastes and toxic compounds were generated in hydrolysis, biodetoxification and fermentation. The techno-economic evaluations suggest that the cost reduction of replacing cellulase enzyme with cheap acid catalysts compensated the partial ethanol loss of sugar conversion to inhibitors (21.5–89.1%). The re-examination of acid hydrolysis process reveals that a substantial breakthrough in highly active and selective acid catalyst is required for acid hydrolysis to compete with enzymic hydrolysis for cellulosic ethanol fermentation. • Biodetoxification was introduced to de-bottleneck the inhibitor barrier in acid hydrolysis. • The ethanol titer of direct acid hydrolysis processing increased to 24.2 g/L. • No wastewater, solids waste and toxic compounds were generated before distillation step. • The full-scale process evaluation of acid hydrolysis was conducted. [ABSTRACT FROM AUTHOR]

Corn dry milling provides a mature model for lignocellulose biorefinery process. To copy this technical success, a crucial step is to transform lignocellulose into starch‐like carbohydrates (SLC), similar to milled corn grain and in a similar fashion to corn dry milling. The transformation process should be zero wastewater generation and sufficient fermentable sugar conservation; the product should be in solid particle form, free of toxic residues, and high enzymatic hydrolysis yield and fermentability. Here we designed and verified a SLC transformation process by (i) biodegradable oxalic acid‐catalyzed pretreatment, and (ii) simultaneous biodegradation of inhibitors and oxalic acid catalyst. The oxalic acid catalyst was effective on disrupting the lignocellulose structure and also biodegradable at low pH value. The biodetoxification fungus Paecilomyces variotii FN89 was capable of degrading the furan/phenolic aldehydes and oxalic acid simultaneously and ultimately, while the fermentable sugars were well preserved. The obtained SLC from wheat straw and corn stover were similar to dry milled corn meal in terms of morphological properties, fermentable sugar contents, enzymatic hydrolysis yield, elemental contents, and free of inhibitors and acid catalyst. The bioconversion of starch‐like wheat straw and corn stover produced 78.5 and 75.3 g/L of ethanol (9.9% and 9.5%, v/v) with the yield of 0.47 and 0.45 g ethanol/g cellulose/xylose, respectively, compared with 78.7 g/L (10.0%, v/v) from corn meal and the yield of 0.48 g ethanol/g starch. Mass balances suggest that the ethanol yield, wastewater generation, and elemental recycling of the SLC from lignocellulose were essentially the same as those of corn meal. [ABSTRACT FROM AUTHOR]

Abstract Background The efficient removal of toxic inhibitors from pretreated lignocellulose biomass is crucially important for consequent cellulosic ethanol fermentation. A. resinae ZN1 biodetoxifies all toxic inhibitors at the neutral pH of 4–6, and the neutralization of acid catalyst in the pretreated lignocellulose is required. However, aqueous alkaline solutions such as sodium hydroxide solution and calcium hydroxide slurry are used which generate several difficulties. Results In this study, a dry biodetoxification method was investigated using dry calcium carbonate (CaCO3) powder as an acid-neutralizing reagent to avoid the use of an aqueous alkaline solution. Dry biodetoxification provides a mild and stable pH without the generation of phenolic compounds. The acid pretreated and dry biodetoxified wheat straw was used as the feedstock of ethanol fermentation and the same performance with the wet biodetoxification using aqueous Ca(OH)2 slurry. The 72 g/L or 9.1% (v/v) of ethanol produced from wheat straw was very close to that of ethanol from corn starch. Conclusions Dry biodetoxification provided a practical method to simplify the process of conventional wet biodetoxification to reduce the time, cost and labor.

• The highest hydrolysis efficiency was to apply 0.5 M HCl to treat 5% rice straw. • 5-HMF and furfural concentrations in the HCl hydrolysate were both highest. • Furans inhibitors in the 2-fold hydrolysates were entirely biodetoxified within 12 h. • Higher H 2 content and volume were obtained when using the biodetoxified rice straw hydrolysate. • Biodetoxification process could be incorporated into biohydrogen production plant. Thermal acid hydrolysis is the most common pretreatment method used to deal with waste lignocellulosic biomass. However, furan derivatives (5‑hydroxy-methylfurfural (5-HMF) and furfural) are unavoidably produced and influence downstream biofuel production. Biological methods are superior to physical and chemical methods in detoxifying 5-HMF and furfural because of economic concerns. Integrating the biodetoxification process into the lignocellulose pretreatment and downstream biofuel production procedure is an important issue. The previous novel strain Burkholderia cepacia H-2 capable of quickly degrading 5-HMF and furfural was applied in the biodetoxification process. In this study, the acid sorts and concentration effects on thermal acid rice straw hydrolysis were investigated first. Rice straw hydrolysates with various dilution ratios were then biodetoxified using on-site inoculating novel strain B. cepacia H-2. The biodetoxified rice straw hydrolysate was then used for biohydrogen production using dark fermentation. The highest hydrolysis efficiency and reducing sugar were 49% and 15.6 g/L, respectively when applying 0.5 M HCl to deal with 5% rice straw at 121°C for 15 min. The 5-HMF and furfural in the 2-fold diluted rice straw hydrolysate could be completely biodetoxified within 12 hrs. The hydrolysate hydrogen yields with and without biodetoxification were 0.90 and 0.64 mmol H 2 /mmol sugar, respectively. The biodetoxification process using the novel strain B. cepacia H-2 was successfully established and could be integrated into the lignocellulose pretreatment and downstream biofuel production procedure as using the rice straw as the feedstock. [Display omitted] [ABSTRACT FROM AUTHOR]

• Carboxylic acids can hinder cell growth, but not lactic acid production, at pH 6. • Furan-rich media hampered sugars uptake in DSM 2314, but not in A166/162 strains. • Lactic acid productivities were more hindered by furan- than by phenol-rich media. • A162 showed the highest inhibitors tolerance both in defined and gardening media. • A162 reduced the furans and phenols content in defined and gardening media. Cellulose valorisation has been successfully addressed for years. However, the use of hemicellulosic hydrolysates is limited due to the presence of C5-sugars and inhibitors formed during pretreatment. Bacillus coagulans is one of the few bacteria able to utilize both C6- and C5-sugars to produce l -lactic acid, but its susceptibility to the lignocellulosic inhibitors needs further investigation. For such a purpose, the tolerance of different B. coagulans strains to increasing concentrations of inhibitors is studied. The isolated A162 strain reached the highest l -lactic acid productivity in all cases (up to 2.4 g L−1 h−1), even in presence of 5 g L−1 of furans and phenols. Remarkably, most of furans and phenolic aldehydes were removed from defined media and hemicellulosic gardening hydrolysate after fermentation with A162. Considering the high productivities and the biodetoxifying effect attained, A162 could be pointed out as a great candidate for valorisation of mixed sugars from hemicellulosic hydrolysates with high inhibitors concentration, promoting the implementation of lignocellulosic biorefineries. [ABSTRACT FROM AUTHOR]

Itaconic acid production using lignocellulose materials is a promising approach to replace sugar substrates such as glucose that are expensive. However, the complicated detoxification of the hydrolysate is pre-requisite to remove the lignocellulose-derived inhibitors to enable high organic acid fermentation. In this study, the hydrolysate prepared using dry acid pretreated and biodetoxified corn stover was tested for itaconic acid production by the fungal strain Aspergillus terreus M69. Corn stover hydrolysate containing 0.85 g/L acetic acid severely inhibited the organic acid production, but a treatment on the hydrolysate with activated charcoal to remove partial acetic acid helped to produce 33.6 g/L itaconic acid at a yield of 0.56 g/g. Most acetic acid released during enzymatic hydrolysis other than pretreatment was responsible for the inhibition of itaconic acid production. The technol-economic analysis showed that the minimum itaconic acid selling price was $1.647 per kg, which was lower than its market price. This study demonstrates the great potential of itaconic acid production using lignocellulose. [ABSTRACT FROM AUTHOR]

Despite the well-recognized merits of simultaneous saccharification and co-fermentation (SSCF) on relieving sugar product inhibition on cellulase activity, a practical concomitance difficulty of xylose with inhibitors in the pretreated lignocellulose feedstock prohibits the essential application of SSCF for cellulosic ethanol fermentation. To maximize the SSCF potentials for cellulosic ethanol production, a dry biorefining approach was proposed starting from dry acid pretreatment, disk milling, and biodetoxification of lignocellulose feedstock. The successful SSCF of the inhibitor free and xylose conserved lignocellulose feedstock after dry biorefining reached a record high ethanol titer at moderate cellulase usage and minimum wastewater generation. For wheat straw, 101.4 g/L of ethanol (equivalent to 12.8% in volumetric percentage) was produced with the overall yield of 74.8% from cellulose and xylose, in which the xylose conversion was 73.9%, at the moderate cellulase usage of 15 mg protein per gram cellulose. For corn stover, 85.1 g/L of ethanol (equivalent to 10.8% in volumetric percentage) is produced with the overall conversion of 84.7% from cellulose and xylose, in which the xylose conversion was 87.7%, at the minimum cellulase usage of 10 mg protein per gram cellulose. Most significantly, the SSCF operation achieved the high conversion efficiency by generating the minimum amount of wastewater. Both the fermentation efficiency and the wastewater generation in the current dry biorefining for cellulosic ethanol production are very close to that of corn ethanol production, indicating that the technical gap between cellulosic ethanol and corn ethanol has been gradually filled by the advancing biorefining technology. [ABSTRACT FROM AUTHOR]

[Display omitted] • All lignocellulose-derived sugars were completely converted to D-lactic acid. • Complete removal of residual sugar and inhibitor impurities facilitated the D-lactide synthesis. • Polymer-grade D-lactide was synthesized from cellulosic D-lactic acid for the first time. • Dry biorefinery did not generate any wastewater stream. D-lactide is the precursor of poly(D-lactide) (PDLA) or stereo-complex with poly(L-lactide) (PLLA). Lignocellulosic biomass provides the essential feedstock option to synthesize D-lactic acid and D-lactide. The residual sugars in D-lactic acid fermentation broth significantly blocks the D-lactide synthesis. This study showed a simultaneous and rate-coordinated conversion of lignocellulose derived glucose, xylose, arabinose, mannose, and galactose into D-lactic acid by adaptively evolved Pediococcus acidilactici ZY271 by simultaneous saccharification and co-fermentation (SSCF) of wheat straw. The produced D-lactic acid achieved minimum residual sugars (∼1.7 g/L), high chirality (∼99.1%) and high titer (∼128 g/L). A dry acid pretreatment eliminated the wastewater stream generation and the biodetoxification by fungus Amorphotheca resinae ZN1 removed the inhibitors from the pretreatment. The removal of the sugar residues and inhibitor impurities in D-lactic acid production from lignocellulose strongly facilitated the D-lactide synthesis. This study filled the gap in cellulosic D-lactide production from lignocellulose-derived D-lactic acid. [ABSTRACT FROM AUTHOR]

The aim of this work is to study the citric acid fermentation by a robust strain Aspergillus niger SIIM M288 using corn stover feedstock after dry dilute sulfuric acid pretreatment and biodetoxification. Citric acid at 100.04 g/L with the yield of 94.11% was obtained, which are comparable to the starch or sucrose based citric acid fermentation. No free wastewater was generated in the overall process from the pretreatment to citric acid fermentation. Abundant divalent metal ions as well as high titer of potassium, phosphate, and nitrogen were found in corn stover hydrolysate. Further addition of extra nutrients showed no impact on increasing citric acid formation except minimum nitrogen source was required. Various fermentation parameters were tested and only minimum regulation was required during the fermentation. This study provided a biorefining process for citric acid fermentation from lignocellulose feedstock with the maximum citric acid titer and yield. [ABSTRACT FROM AUTHOR]

Background: Biodetoxification by the fungus Amorphotheca resinae ZN1 provides an effective way of inhibitor removal from pretreated lignocellulose feedstock and has been applied in the process of ethanol, biolipids, and lactic acid production. However, the long-time used and the consumption of considerable xylose in the pretreated materials reduced the process efficiency. The improvements of biodetoxification should be made to enhance the production of biochemical from lignocellulosic materials. Results: This study reported an acceleration method of A. resinae ZN1-based biodetoxification on the corn stover (CS) feedstock pretreated using dry dilute acid pretreatment. Under proper aeration and well-mixing condition, the conversion rate of furfural, 5-hydroxymethylfurfural (HMF), acetic acid, and typical phenolic compounds were significantly accelerated by more than twofolds faster, which resulted in the reduction of biodetoxification time from 96 h in the conventional process to 36 h. Simultaneous saccharification and ethanol fermentation assay on accelerated biodetoxification of the dry dilute acid pretreated CS feedstock achieved the similar ethanol titer (48.56 g/L of 36 h' accelerated biodetoxification vs. 50.00 g/L of 4 days' conventional biodetoxification) and yield (58.10 vs. 59.63%). Substrate priority of inhibitors to sugars by A. resinae ZN1 was discovered and considerable xylose was reserved in the accelerated biodetoxification. Cell growth of A. resinae fungus in liquid medium and on pretreated CS solids revealed that the enhanced aeration enhanced the biodetoxification rate rather than the cell growth rate. Accelerated inhibitor conversion might come from the increased supply of cofactors of nicotinamide adenine dinucleotide or nicotinamide adenine dinucleotide phosphate from the step of aldehyde inhibitors to the corresponding acids, instead of cell mass increase. Conclusion: Accelerated biodetoxification reduced the period of biodetoxification and retained the xylose components in the pretreated CS, which provided a practical method on improving process efficiency for cellulosic ethanol production from severe pretreated lignocellulose feedstock. [ABSTRACT FROM AUTHOR]

Pediococcus acidilactici TY112 producing l -lactic acid and P. acidilactici ZP26 producing d -lactic acid, were engineered from the wild-type P. acidilactici DQ2 by ldhD or ldh gene disruption, and the robustness of the wild-type strain to the inhibitors derived from lignocellulose pretreatment was maintained well. In simultaneous saccharification and fermentation (SSF), 77.66 g L −1 of l -lactic acid and 76.76 g L −1 of d -lactic acid were obtained at 25% (w/w) solids content of dry dilute acid pretreated and biodetoxified corn stover feedstock. l - and d -Lactic acid yield and productivity were highly dependent on the inhibitor removal extent due to the significant down-regulation on the expressions of ldh and ldhD encoding lactate dehydrogenase by inhibitor, especially syringaldehyde and vanillin at the low concentrations. This study provided a prototype of industrial process for high titer l - and d -lactic acid production from lignocellulose feedstock. [ABSTRACT FROM AUTHOR]

Background: Furfural and 5-hydroxymethylfurfural (HMF) are the two major inhibitor compounds generated from lignocellulose pretreatment, especially for dilute acid, steam explosion, neutral hot water pretreatment methods. The two inhibitors severely inhibit the cell growth and metabolism of fermenting strains in the consequent bioconversion step. The biodetoxification strain Amorphotheca resinae ZN1 has demonstrated its extraordinary capacity of fast and complete degradation of furfural and HMF into corresponding alcohol and acid forms. The elucidation of degradation metabolism of A. resinae ZN1 at molecular level will facilitate the detoxification of the pretreated lignocellulose biomass and provide the metabolic pathway information for more powerful biodetoxification strain development. Results: Amorphotheca resinae ZN1 was able to use furfural or HMF as the sole carbon source for cell growth. During the detoxification process, A. resinae ZN1 firstly reduced furfural or HMF into furfuryl alcohol or HMF alcohol, and then oxidized into furoic acid or HMF acid through furan aldehyde as the intermediate at low concentration level. The cell mass measurement suggested that furfural was more toxic to A. resinae ZN1 than HMF. In order to identify the degradation mechanism of A. resinae ZN1, transcription levels of 137 putative genes involved in the degradation of furfural and HMF in A. resinae ZN1 were investigated using the real-time quantitative PCR (qRT-PCR) method under the stress of furfural and HMF, as well as the stress of their secondary metabolites, furfuryl alcohol and HMF alcohol. Two Zndependent alcohol dehydrogenase genes and five AKR/ARI genes were found to be responsible for the furfural and HMF conversion to their corresponding alcohols. For the conversion of the two furan alcohols to the corresponding acids, three propanol-preferring alcohol dehydrogenase genes, one NAD(P)+-depending aldehyde dehydrogenase gene, or two oxidase genes with free oxygen as the substrate were identified under aerobic condition. Conclusions: The genes responsible for the furfural and HMF degradation to the corresponding alcohols and acids in A. resinae ZN1 were identified based on the analysis of the genome annotation, the gene transcription data and the inhibitor conversion results. These genetic resources provided the important information for understanding the mechanism of furfural and HMF degradation and modification of high tolerant strains used for biorefinery processing. [ABSTRACT FROM AUTHOR]

Future biorefineries will integrate biomass conversion processes to produce fuels, power, heat and value-added chemicals. Due to its low price and wide distribution, lignocellulosic biomass is expected to play an important role toward this goal. Regarding renewable biofuel production, bioethanol from lignocellulosic feedstocks is considered the most feasible option for fossil fuels replacement since these raw materials do not compete with food or feed crops. In the overall process, lignin, the natural barrier of the lignocellulosic biomass, represents an important limiting factor in biomass digestibility. In order to reduce the recalcitrant structure of lignocellulose, biological pretreatments have been promoted as sustainable and environmentally friendly alternatives to traditional physico-chemical technologies, which are expensive and pollute the environment. These approaches include the use of diverse white-rot fungi and/or ligninolytic enzymes, which disrupt lignin polymers and facilitate the bioconversion of the sugar fraction into ethanol. As there is still no suitable biological pretreatment technology ready to scale up in an industrial context, white-rot fungi and/or ligninolytic enzymes have also been proposed to overcome, in a separated or in situ biodetoxification step, the effect of the inhibitors produced by non-biological pretreatments. The present work reviews the latest studies regarding the application of different microorganisms or enzymes as useful and environmentally friendly delignification and detoxification technologies for lignocellulosic biofuel production. This review also points out the main challenges and possible ways to make these technologies a reality for the bioethanol industry. [ABSTRACT FROM AUTHOR]

• Genome integration of CGS9114_RS09725 accelerated vanillin reduction. • Simultaneous vanillin conversion and D-lactic acid fermentation was conducted. • High titer D-lactic acid production from corn stover was achieved by SSCF. Phenolic aldehydes from lignocellulose pretreatment are strong inhibitors of cell growth and metabolism of cellulosic lactic acid bacteria. Their low solubility and recalcitrance highly reduce the removal efficiency of various detoxification methods. This study shows a simultaneous conversion of phenolic aldehydes and fermentation of D-lactic acid by Pediococcus acidilactici using corn stover feedstock. Vanillin was found to be the strongest phenolic aldehyde inhibitor to P. acidilactici. The overexpression of a short-chain dehydrogenase encoded by the gene CGS9114_RS09725 from Corynebacterium glutamicum was identified to play a key role in D-lactic acid fermentability of P. acidilactici. The engineered P. acidilactici with the genome integration of CGS9114_RS09725 showed the accelerated vanillin reduction and improved cellulosic D-lactic acid production. This study reveals that vanillin conversion is crucial for D-lactic acid fermentation, and the direct expression of a specific vanillin reduction gene in lactic acid bacterium efficiently improves cellulosic D-lactic acid production. [ABSTRACT FROM AUTHOR]

Background: Fast, complete, and ultimate removal of inhibitory compounds derived from lignocellulose pretreatment is the prerequisite for efficient production of cellulosic ethanol and biochemicals. Biodetoxification is the most promising method for inhibitor removal by its unique advantages. The biodetoxification mechanisms of a unique diploid fungus responsible for highly efficient biodetoxification in solid-state culture was extensively investigated in the aspects of cellular structure, genome sequencing, transcriptome analysis, and practical biodetoxification. Results: The inborn heterozygous diploid structure of A. resinae ZN1 uniquely contributed to the enhancement of inhibitor tolerance and conversion. The co-expression of gene pairs contributed to the enhancement of the degradation of lignocellulose-derived model inhibitors. The ultimate inhibitors degradation pathways and sugar conservation were elucidated by microbial degradation experimentation as well as the genomic and transcriptomic sequencing analysis. Conclusions: The finding of the heterozygous diploid structure in A. resinae ZN1 on biodetoxification took the first insight into the global overview of biodetoxification mechanism of lignocellulose-derived inhibitors. This study provided a unique and practical biodetoxification biocatalyst of inhibitor compounds for lignocellulose biorefinery processing, as well as the synthetic biology tools on biodetoxification of biorefinery fermenting strains. [ABSTRACT FROM AUTHOR]

Phenolic inhibitors generated during alkaline pretreatment of lignocellulosic biomasses significantly hinder bacterial growth and subsequent biofuel and biochemical production. Water rinsing is an efficient method for removing these compounds. Nevertheless, this method often generates a great amount of wastewater, and leads to the loss of solid fiber particles and fermentable sugars. Kurthia huakuii LAM0618T, a recently identified microorganism, was herein shown to be able to efficiently transform phenolic compounds (syringaldehyde, hydroxybenzaldehyde, and vanillin) into less toxic acids. Taking advantage of these properties, a biodetoxification method was established by inoculating K. huakuii LAM0618T into the NH3/H2O2-pretreated unwashed corn stover to degrade phenolic inhibitors and weak acids generated during the pretreatment. Subsequently, 33.47 and 17.91 g/L lactic acid was produced by Bacillus coagulans LA204 at 50 °C through simultaneous saccharification and fermentation (SSF) from 8% (w/w) of NH3/H2O2-pretreated corn stover with or without K. huakuii LAM0618T-biodetoxification, indicating biodetoxification significantly increased lactic acid titer and yield. Importantly, using 15% (w/w) of the NH3/H2O2-pretreated K. huakuii LAM0618T-biodetoxified corn stover as a substrate through fed-batch simultaneous saccharification and fermentation, high titer and high yield of lactic acid (84.49 g/L and 0.56 g/g corn stover, respectively, with a productivity of 0.88 g/L/h) were produced by Bacillus coagulans LA204. Therefore, this study reported the first study on biodetoxification of alkaline-pretreated lignocellulosic material, and this biodetoxification method could replace water rinsing for removal of phenolic inhibitors and applied in biofuel and biochemical production using the alkaline-pretreated lignocellulosic bioresources. [ABSTRACT FROM AUTHOR]