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The capacity of Blue Carbon Ecosystems to act as carbon sinks is strongly influenced by the metabolism of soil-associated microbes, which ultimately determine how much carbon is accumulated or returned to the atmosphere. The rapid evolution of sequencing technologies has facilitated the generation of tremendous amounts of data on what taxa comprise belowground microbial assemblages, largely available as isolated datasets, offering an opportunity for synthesis research that informs progress on understanding Blue Carbon microbiomes. We identified questions that can be addressed with a synthesis approach, including the high variability across datasets, space, and time due to differing sampling techniques, ecosystem or vegetation specificity, and the relationship between microbiome community and edaphic properties, particularly soil carbon. To address these questions, we collated 34 16S rRNA amplicon sequencing datasets, including bulk soil or rhizosphere from seagrass, mangroves, and saltmarshes within publicly available repositories. We identified technical and theoretical challenges that precluded a synthesis of multiple studies with currently available data, and opportunities for addressing the knowledge gaps within Blue Carbon microbial ecology going forward. Here, we provide a standardisation toolbox that supports enacting tasks for the acquisition, management, and integration of Blue Carbon-associated sequencing data and metadata to potentially elucidate novel mechanisms behind Blue Carbon dynamics. [ABSTRACT FROM AUTHOR]

Ecological restoration is increasingly being upscaled to larger spatial scales of tens to hundreds of kilometers. Yet the complex logistics and high costs of ecological restoration mean that actions must be placed strategically at local scales of tens of meters to maximize ecological benefits and reduce socioeconomic costs. Despite the purported use of systematic planning tools for allocating restoration effort, the uptake and implementation of data‐driven restoration planning and ecological goal setting remains poor in many restoration programs. Here we demonstrate how the sequential workflows of systematic conservation planning can be translated to restoration at two spatial scales to enhance estuarine fisheries in eastern Australia. We select estuaries where restoration is feasible and recommended based on quantitative regional ecological goals (i.e. regional‐scale prioritization), and then identify potential restoration sites at smaller spatial scales within estuaries based on the principles of spatial ecology to ensure that the success and benefits of restoration are maximized (i.e. local‐scale prioritization). At the regional scale, we identified four levels of restoration priorities (very high, high, intermediate, and low) using quantitative ecological goals and the current ecological understanding of each system. At the local scale, we used spatially explicit Bayesian belief networks to identify sites that maximize restoration outcomes based on the environmental niche of habitat‐forming species and the spatial configuration of habitats that maximizes their use by fish. We show that using systematic frameworks can become an essential tool to optimize restoration investments at multiple scales as efforts upscale globally. [ABSTRACT FROM AUTHOR]

The seascape context of coastal ecosystems plays a pivotal role in shaping patterns in fish recruitment, abundance, and diversity. It might also be a principal determinant in structuring the recruitment of fish assemblages to restored habitats, but the trajectories of these relationships require further testing. In this study, we surveyed fish assemblages from 14 restored oyster reefs and 14 control sites in the Noosa River, Queensland, Australia, that differed in the presence or absence of seagrass within 500 m, over four periods using baited cameras. Fish assemblages at oyster reefs differed from those at control sites, with higher species richness (1.4 times) and more individuals of taxa that are harvested by fishers (1.8 times). The presence or absence of seagrass nearby affected the abundance of a key harvestable fish species (yellowfin bream Acanthopagrus australis) on oyster reefs, but not the overall composition of fish assemblages, species richness, or the total abundance of harvestable fishes overall. These findings highlight the importance of considering species-specific patterns in seascape utilization when selecting restoration sites and setting restoration goals, and suggest that the effects of restoration on fish assemblages might be optimized by focusing efforts in prime positions in coastal seascapes. [ABSTRACT FROM AUTHOR]

At the crux of the debate over the global sustainability of fisheries is what society must do to prevent over‐exploitation and aid recovery of fisheries that have historically been over‐exploited. The focus of debates has been on controlling fishing pressure, and assessments have not considered that stock production may be affected by changes in fish habitat. Fish habitats are being modified by climate change, built infrastructure, destructive fishing practices and pollution. We conceptualize how the classification of stock status can be biased by habitat change. Habitat loss and degradation can result in either overly optimistic or overly conservative assessment of stock status. The classification of stock status depends on how habitat affects fish demography and what reference points management uses to assess status. Nearly half of the 418 stocks in a global stock assessment database use seagrass, mangroves, coral reefs and macroalgae habitats that have well‐documented trends. There is also considerable circumstantial evidence that habitat change has contributed to over‐exploitation or enhanced production of data‐poor fisheries, like inland and subsistence fisheries. Globally many habitats are in decline, so the role of habitat should be considered when assessing the global status of fisheries. New methods and global databases of habitat trends and use of habitats by fishery species are required to properly attribute causes of decline in fisheries and are likely to raise the profile of habitat protection as an important complementary aim for fisheries management. [ABSTRACT FROM AUTHOR]

Conservation focuses on maintaining biodiversity and ecosystem functioning, but gaps in our knowledge of species biology and ecological processes often impede progress. For this reason, focal species and habitats are used as surrogates for multispecies conservation, but species-based approaches are not widely adopted in marine ecosystems. Reserves in the Solomon Islands were designed on the basis of local ecological knowledge to conserve bumphead parrotfish ( Bolbometopon muricatum) and to protect food security and ecosystem functioning. Bumphead parrotfish are an iconic threatened species and may be a useful surrogate for multispecies conservation. They move across tropical seascapes throughout their life history, in a pattern of habitat use that is shared with many other species. We examined their value as a conservation surrogate and assessed the importance of seascape connectivity (i.e., the physical connectedness of patches in the seascape) among reefs, mangroves, and seagrass to marine reserve performance. Reserves were designed for bumphead parrotfish, but also enhanced the abundance of other species. Integration of local ecological knowledge and seascape connectivity enhanced the abundance of 17 other harvested fish species in local reserves. This result has important implications for ecosystem functioning and local villagers because many of these species perform important ecological processes and provide the foundation for extensive subsistence fisheries. Our findings suggest greater success in maintaining and restoring marine ecosystems may be achieved when they are managed to conserve surrogate species and preserve functional seascape connections. Incorporación de Especies Sustitutas y de Conectividad Marina para Mejorar los Resultados de Conservación [ABSTRACT FROM AUTHOR]

ABSTRACT Worldwide, coastal systems provide some of the most productive habitats, which potentially influence a range of marine and terrestrial ecosystems through the transfer of nutrients and energy. Several reviews have examined aspects of connectivity within coastal seascapes, but the scope of those reviews has been limited to single systems or single vectors. We use the transfer of carbon to examine the processes of connectivity through multiple vectors in multiple ecosystems using four coastal seascapes as case studies. We discuss and compare the main vectors of carbon connecting different ecosystems, and then the natural and human-induced factors that influence the magnitude of effect for those vectors on recipient systems. Vectors of carbon transfer can be grouped into two main categories: detrital particulate organic carbon ( POC) and its associated dissolved organic and inorganic carbon ( DOC/ DIC) that are transported passively; and mobile consumers that transport carbon actively. High proportions of net primary production can be exported over meters to hundreds of kilometers from seagrass beds, algal reefs and mangroves as POC, with its export dependent on wind-generated currents in the first two of these systems and tidal currents for the last. By contrast, saltmarshes export large quantities of DOC through tidal movement, while land run-off plays a critical role in the transport of terrestrial POC and DOC into temperate fjords. Nekton actively transfers carbon across ecosystem boundaries through foraging movements, ontogenetic migrations, or 'trophic relays', into and out of seagrass beds, mangroves or saltmarshes. The magnitude of these vectors is influenced by: the hydrodynamics and geomorphology of the region; the characteristics of the carbon vector, such as their particle size and buoyancy; and for nekton, the extent and frequency of migrations between ecosystems. Through a risk-assessment process, we have identified the most significant human disturbances that affect the integrity of connectivity among ecosystems. Loss of habitat, net primary production ( NPP) and overfishing pose the greatest risks to carbon transfer in temperate saltmarsh and tropical estuaries, particularly through their effects on nekton abundance and movement. In comparison, habitat/ NPP loss and climate change are likely to be the major risks to carbon transfer in temperate fjords and temperate open coasts through alteration in the amount of POC and/or DOC/ DIC being transported. While we have highlighted the importance of these vectors in coastal seascapes, there is limited quantitative data on the effects of these vectors on recipient systems. It is only through quantifying those subsidies that we can effectively incorporate complex interactions into the management of the marine environment and its resources. [ABSTRACT FROM AUTHOR]

Aim To evaluate the potential of habitat connectivity to promote the effectiveness of marine reserves. We used heterogeneous reef seascapes as a model system to examine the potential interaction of reserves and mangrove-reef connectivity and compared the magnitude of these effects across the western Pacific Ocean. Location The tropical and subtropical western Pacific, including the Solomon Islands, Great Barrier Reef and Moreton Bay, Australia. Methods We quantified fish densities on coral reefs (38 sites) and in mangrove forests (19 sites) across seven marine reserves and twelve unprotected control locations. Fish assemblages were in seascapes supporting either adjacent reefs and mangroves or isolated reefs. For each reserve-control comparison, we evaluated the potential interactive effects of habitat connectivity on species richness and densities of harvested species, functional groups, families and individual species. We then examined the influence of spatial variation in reserve attributes, seascape heterogeneity and latitude on the magnitude of reserve-connectivity effects. Results Snappers ( Lutjanidae) and rabbitfish ( Siganidae) were more abundant on reserve reefs close to mangroves in all regions. These interactive effects also enhanced the abundance of sweetlip ( Haemulidae), bream ( Sparidae), harvested fish, herbivores and piscivores and species richness in two of the three regions examined. Spatial variation in the magnitude of reserve-connectivity effects was explained by differences among reserves in seascape variables (i.e. area of mangroves and reef, duration of mangrove inundation and distance to rivers) but not by reserve attributes (i.e. age, size, poaching) or latitude. Main conclusions Habitat connectivity improved the effectiveness of reserves across the western Pacific Ocean. We recommend that heterogeneous landscapes with high-habitat connectivity should be viewed as high priorities for conservation. By improving our understanding of connectivity, and through its explicit incorporation into conservation, we may have greater success in restoring biodiversity and functioning of ecosystems. [ABSTRACT FROM AUTHOR]

In light of the global extent and cascading effect of our impact on the environment, we design and manage reserves to restore biodiversity and the functioning of ecosystems. Mobile organisms link important processes across ecosystems, however, their roles in providing these services are often overlooked and we need to know how they influence ecosystem functions in reserves. Herbivorous fish play a key role in coral reef seascapes. By removing algae, they promote coral growth and recruitment, and help to increase resilience., We examined how connectivity with mangroves affected herbivore populations and benthic succession on reefs in eastern Australia. We surveyed fish assemblages, examined reef composition and characterised benthic recruitment on reefs at multiple levels of connectivity with mangroves, in a no-take reserve and areas open to fishing., Our results show that connectivity enhanced herbivore biomass and richness in reserves, and that these connectivity and reserve effects interacted to promote herbivory on protected reefs near mangroves., Connectivity and reserve protection combined to double the biomass of roving herbivorous fish on protected reefs near mangroves. The increase in grazing intensity drove a trophic cascade that reduced algal cover and enhanced coral recruitment and reef resilience., Synthesis and applications. Our findings demonstrate that ecosystem resilience can be improved by managing both reefs and adjacent habitats together as functional seascape units. By understanding how landscapes influence resilience, and explicitly incorporating these effects into conservation decision-making, we may have greater success with environmental restoration and preservation actions. [ABSTRACT FROM AUTHOR]

Stable nitrogen isotopes were used to assess the effects of wastewater treatment plant (WWTP) upgrades on the utilisation of sewage-N by estuarine biota in Moreton Bay, Australia. We measured δ15N of filamentous algae, mangrove leaves and shore crabs at the Brisbane and Logan Rivers before and after scheduled WWTP upgrades, and at two reference rivers where WWTPs had been upgraded >4 years previously. The total N discharged into Brisbane River decreased by >80% after the upgrades had occurred, but N loads remained similar at Logan River despite the upgrade. In Brisbane River, δ15N values of algae and crabs decreased and were comparable to the reference rivers within 1–2 years but no changes occurred at Logan River. The δ15N of mangrove leaves remained elevated in all rivers, indicating that sewage-N remained a major source to mangroves either from residual WWTP discharges or from N accumulated in the sediments over many years. [Copyright &y& Elsevier]

This study aims to determine the drivers of root decomposition and its role in carbon (C) budgets in mangroves and saltmarsh. We review the patterns of root decomposition, and its contribution to C budgets, in mangroves and saltmarsh: the impact of climatic (temperature and precipitation), geographic (latitude), temporal (decay period) and biotic (ecosystem type) drivers using multiple regression models. Best-fit models explain 50% and 48% of the variance in mangrove and saltmarsh root decay rates, respectively. A combination of biotic, climatic, geographic and temporal drivers influences root decay rates. Rainfall and latitude have the strongest influence on root decomposition rates in saltmarsh. For mangroves, forest type is the most important; decomposition is faster in riverine mangroves than other types. Mangrove species Avicennia marina and saltmarsh species Spartina maritima and Phragmites australis have the highest root decomposition rates. Root decomposition rates of mangroves were slightly higher in the Indo-west Pacific region (average 0.16% day − 1 ) than in the Atlantic-east Pacific region (0.13% day − 1 ). Mangrove root decomposition rates also show a negative exponential relationship with porewater salinity. In mangroves, global root decomposition rates are 0.15% day − 1 based on the median value of rates in individual studies (and 0.14% day − 1 after adjusting for area of mangroves at different latitudes). In saltmarsh, global root decomposition rates average 0.12% day − 1 (no adjustment for area with latitude necessary). Our global estimate of the amount of root decomposing is 10 Tg C yr − 1 in mangroves (8 Tg C yr − 1 adjusted for area by latitude) and 31 Tg C yr − 1 in saltmarsh. Local root C burial rates reported herein are 51–54 g C m − 2 yr − 1 for mangroves (58–61 Tg C yr − 1 adjusted for area by latitude) and 191 g C m − 2 yr − 1 for saltmarsh. These values account for 24.1–29.1% (mangroves) and 77.9% (saltmarsh) of the reported sediment C accumulation rates in these habitats. Globally, dead root C production is the significant source of stored sediment C in mangroves and saltmarsh. [ABSTRACT FROM AUTHOR]

Mangroves are blue carbon ecosystems that sequester significant carbon but release CO 2 , and to a lesser extent CH 4, from the sediment through oxidation of organic carbon or from overlying water when flooded. Previous studies, e.g. Leopold et al. (2015), have investigated sediment organic carbon (SOC) content and CO 2 flux separately, but could not provide a holistic perspective for both components of blue carbon. Based on field data from a mangrove in southeast Queensland, Australia, we used a structural equation model to elucidate (1) the biotic and abiotic drivers of surface SOC (10 cm) and sediment CO 2 flux; (2) the effect of SOC on sediment CO 2 flux; and (3) the covariation among the environmental drivers assessed. Sediment water content, the percentage of fine-grained sediment (< 63 μm), surface sediment chlorophyll and light condition collectively drive sediment CO 2 flux, explaining 41% of their variation. Sediment water content, the percentage of fine sediment, season, landform setting, mangrove species, sediment salinity and chlorophyll collectively drive surface SOC, explaining 93% of its variance. Sediment water content and the percentage of fine sediment have a negative impact on sediment CO 2 flux but a positive effect on surface SOC content, while sediment chlorophyll is a positive driver of both. Surface SOC was significantly higher in Avicennia marina (2994 ± 186 g m − 2 , mean ± SD) than in Rhizophora stylosa (2383 ± 209 g m − 2 ). SOC was significantly higher in winter (2771 ± 192 g m − 2 ) than in summer (2599 ± 211 g m − 2 ). SOC significantly increased from creek-side (865 ± 89 g m − 2 ) through mid (3298 ± 137 g m − 2 ) to landward (3933 ± 138 g m − 2 ) locations. Sediment salinity was a positive driver of SOC. Sediment CO 2 flux without the influence of biogenic structures (crab burrows, aerial roots) averaged 15.4 mmol m − 2 d − 1 in A. marina stands under dark conditions, lower than the global average dark flux (61 mmol m − 2 d − 1 ) for mangroves. [ABSTRACT FROM AUTHOR]

Habitat loss is accelerating a global extinction crisis. Conservation requires understanding links between species and habitats. Emerging research is revealing important associations between vegetated coastal wetlands and marine megafauna, such as cetaceans, sea turtles, and sharks. But these links have not been reviewed and the importance of these globally declining habitats is undervalued. Here, we identify associations for 102 marine megafauna species that utilize these habitats, increasing the number of species with associations based on current International Union for the Conservation of Nature (IUCN) species assessments by 59% to 174, accounting for over 13% of all marine megafauna. We conclude that coastal wetlands require greater protection to support marine megafauna, and present a simple, effective framework to improve the inclusion of habitat associations within species assessments. Marine megafauna and vegetated coastal wetland habitats (seagrasses, saltmarshes, and mangroves) are under intense threat and declining globally. Emerging research and novel methodologies have unveiled important, previously unknown habitat associations between marine megafauna and these habitats. Unless we can conceptualize and critically examine these habitat associations, management and conservation can be undermined. Identifying threatened species that are dependent on threatened habitats is essential for informing on actions to prevent population declines. [ABSTRACT FROM AUTHOR]