Search

Biological indicators are highly relevant for assessing the condition of a soil as they are integrative; they reflect the overall impact of physical, chemical and biological changes. Indigenous soil organisms are preferable to other test organisms because the diversity and condition of indigenous soil organisms reflect both acute and chronic effects of soil disturbances. Nematodes are ubiquitous, speciose, easily extractable and present in extremely high numbers. Given the ever increasing amount of sequence data, DNA barcode-based community analysis will soon be possible and a next step would be to define objective criteria for the ecological grouping of soil nematodes. Here, we present a framework to ascertain which traits are correlated with a tolerance to stress. For this, a field study on the effects of pH and copper on nematode communities was re-analysed. Changes in abundances of individual genera were correlated with a number of potentially stress tolerance-related characteristics. The generalised least squares (GLS) method was used to account for the phylogenetic dependence of the data. Only the relationship between the ability to enter a survival stage and tolerance to copper at pH 6.1 was found to be significant, but the quantity of missing data probably had a negative impact on the analyses. This study did, however, clearly demonstrate the importance of accounting for the effects of phylogenetic dependence in the data. When the phylogeny was taken into account, we observed an average change in P value of 0.196 (and in some cases as much as 0.6) for the correlations of possible stress-related characteristics and Cu or pH tolerance. This research constitutes a proof-of-principle for a transparent method to relate stress tolerance to (ecological) characteristics. The usefulness of this powerful method should become even clearer when substantially higher numbers of individuals are analysed (as facilitated by using DNA barcodes) and when missing data are filled in. [ABSTRACT FROM AUTHOR]

Long-term effects of Cd, Cr, Cu, Se and Zn were studied 7 years after artificially contaminating plots of an agricultural field on a calcareous chernozem soil. Effects of three to four different contamination levels (originally 10, 30, 90 and 270 mg kg−1) were studied. Nematode density was significantly reduced by 90 and 270 mg kg−1 Se as well as by 270 mg kg−1 Cr, while 90 and 270 mg kg−1 Se also reduced nematode generic richness. Maturity Index values (calculated for c-p 2–5 nematodes) consistently decreased with increasing Cr and Se concentration and to a lesser extent in Zn plots as well. Structure Index showed decreasing trends in increasing Cr, Se and (to a lesser extent) in Zn treatments, while in Cd it shows a moderate increase. Distribution of c-p groups was negatively affected by the increasing Cr and Se concentration, while in Zn plots, this decrease was not significant. Response of feeding groups to pollutions was similar to other parameters: Cr and Se caused significant changes toward the loss of variability. The proportion of the most sensitive omnivorous and predatory nematodes decreased clearly as a consequence of Cr and Se treatments. Zn pollution also resulted in a slight decrease in this group, while Cd caused an increase. Nematode diversity profiles showed a significant decrease in the plots of increased Cr and Se concentrations, while increased concentrations of Cu and Zn resulted in ambiguous effects. Besides providing evidence on the harmful effects of Cr and Se on a soil nematode assemblage, our results suggest that simultaneous analysis of Maturity Index, Structure Index and diversity profiles provide a promising tool in nematological indication of soil pollution. [Copyright &y& Elsevier]