1. The history and geographic distribution of a KCNQ1 atrial fibrillation risk allele
- Author
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W. Scott Watkins, Derek Lundahl, Steven E. Boyden, Shiya Song, Mary Anne Karren, J. Brent Muhlestein, Shannon Hateley, Chuanchau J. Jou, Colin T. Maguire, Jeffrey L. Anderson, Khushi U Shah, Susan P. Etheridge, Kenneth G. Chahine, Brett Kennedy, Martin Tristani-Firouzi, Gordon Lemmon, Lindsay Meyers, Ivor J. Benjamin, Stacey Knight, Chase Pribble, Catherine A. Ball, Shuping Lai, Christopher A. Kauffman, Scott Cho, Cammon B. Arrington, Natalia S. Torres, Michael Riedel, Joshua G. Schraiber, John F. Carlquist, Jake K. Byrnes, Julie M. Granka, Neil E. Bowles, Mark Yandell, and Angelica Lopez-Izquierdo
- Subjects
Male ,Genotype ,Population genetics ,Denmark ,Science ,Induced Pluripotent Stem Cells ,Population ,Mutation, Missense ,Action Potentials ,Emigrants and Immigrants ,General Physics and Astronomy ,Context (language use) ,Biology ,Polymorphism, Single Nucleotide ,Article ,General Biochemistry, Genetics and Molecular Biology ,Coalescent theory ,Risk Factors ,Utah ,Genetics research ,Atrial Fibrillation ,medicine ,Humans ,Genetic Predisposition to Disease ,Myocytes, Cardiac ,Allele ,education ,Alleles ,education.field_of_study ,Multidisciplinary ,Geography ,Human migration ,business.industry ,Atrial fibrillation ,Cardiovascular genetics ,General Chemistry ,Middle Aged ,medicine.disease ,Genetic architecture ,Pedigree ,Geographic distribution ,Evolutionary biology ,KCNQ1 Potassium Channel ,Female ,business - Abstract
The genetic architecture of atrial fibrillation (AF) encompasses low impact, common genetic variants and high impact, rare variants. Here, we characterize a high impact AF-susceptibility allele, KCNQ1 R231H, and describe its transcontinental geographic distribution and history. Induced pluripotent stem cell-derived cardiomyocytes procured from risk allele carriers exhibit abbreviated action potential duration, consistent with a gain-of-function effect. Using identity-by-descent (IBD) networks, we estimate the broad- and fine-scale population ancestry of risk allele carriers and their relatives. Analysis of ancestral migration routes reveals ancestors who inhabited Denmark in the 1700s, migrated to the Northeastern United States in the early 1800s, and traveled across the Midwest to arrive in Utah in the late 1800s. IBD/coalescent-based allele dating analysis reveals a relatively recent origin of the AF risk allele (~5000 years). Thus, our approach broadens the scope of study for disease susceptibility alleles to the context of human migration and ancestral origins., Many rare high-impact variants have been associated with disease, but the origins and functional impact are not always explored. Here, the authors trace the ancestry of a rare high impact atrial fibrillation allele in KCNQ1, and use iPSC-derived cardiomyocytes to characterize the effect of the allele.
- Published
- 2021