13 results on '"Ward, Jane"'
Search Results
2. Enhancement of Plant Metabolite Fingerprinting by Machine Learning
- Author
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Scott, Ian M., Vermeer, Cornelia P., Liakata, Maria, Corol, Delia I., Ward, Jane L., Lin, Wanchang, Johnson, Helen E., Whitehead, Lynne, Kular, Baldeep, Baker, John M., Walsh, Sean, Dave, Anuja, Larson, Tony R., Graham, Ian A., Wang, Trevor L., King, Ross D., Draper, John, and Beale, Michael H.
- Published
- 2010
3. Comparative Compositions of Grain of Bread Wheat, Emmer and Spelt Grown with Different Levels of Nitrogen Fertilisation.
- Author
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Lovegrove, Alison, Dunn, Jack, Pellny, Till K., Hood, Jessica, Burridge, Amanda J., America, Antoine H. P., Gilissen, Luud, Timmer, Ruud, Proos-Huijsmans, Zsuzsan A. M., van Straaten, Jan Philip, Jonkers, Daisy, Ward, Jane L., Brouns, Fred, and Shewry, Peter R.
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COMPOSITION of grain ,BREAD ,WHEAT ,BETAINE ,AGRICULTURAL intensification ,BETA-glucans ,GRAIN ,IRON - Abstract
Five cultivars of bread wheat and spelt and three of emmer were grown in replicate randomised field trials on two sites for two years with 100 and 200 kg nitrogen fertiliser per hectare, reflecting low input and intensive farming systems. Wholemeal flours were analysed for components that are suggested to contribute to a healthy diet. The ranges of all components overlapped between the three cereal types, reflecting the effects of both genotype and environment. Nevertheless, statistically significant differences in the contents of some components were observed. Notably, emmer and spelt had higher contents of protein, iron, zinc, magnesium, choline and glycine betaine, but also of asparagine (the precursor of acrylamide) and raffinose. By contrast, bread wheat had higher contents of the two major types of fibre, arabinoxylan (AX) and β-glucan, than emmer and a higher AX content than spelt. Although such differences in composition may be suggested to result in effects on metabolic parameters and health when studied in isolation, the final effects will depend on the quantity consumed and the composition of the overall diet. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
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4. Novel molecules and target genes for vegetative heat tolerance in wheat.
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Rose, Teresa, Wilkinson, Mark, Lowe, Claudia, Xu, Jiemeng, Hughes, David, Hassall, Kirsty L., Hassani‐Pak, Keywan, Amberkar, Sandeep, Noleto‐Dias, Clarice, Ward, Jane, and Heuer, Sigrid
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WHEAT ,HEAT shock proteins ,METABOLITES ,CROP improvement ,PHOTOSYNTHETIC rates ,PSYCHOLOGICAL stress - Abstract
To prevent yield losses caused by climate change, it is important to identify naturally tolerant genotypes with traits and related pathways that can be targeted for crop improvement. Here we report on the characterization of contrasting vegetative heat tolerance in two UK bread wheat varieties. Under chronic heat stress, the heat‐tolerant cultivar Cadenza produced an excessive number of tillers which translated into more spikes and higher grain yield compared to heat‐sensitive Paragon. RNAseq and metabolomics analyses revealed that over 5000 genotype‐specific genes were differentially expressed, including photosynthesis‐related genes, which might explain the observed ability of Cadenza to maintain photosynthetic rate under heat stress. Around 400 genes showed a similar heat‐response in both genotypes. Only 71 genes showed a genotype × temperature interaction. As well as known heat‐responsive genes such as heat shock proteins (HSPs), several genes that have not been previously linked to the heat response, particularly in wheat, have been identified, including dehydrins, ankyrin‐repeat protein‐encoding genes, and lipases. Contrary to primary metabolites, secondary metabolites showed a highly differentiated heat response and genotypic differences. These included benzoxazinoid (DIBOA, DIMBOA), and phenylpropanoids and flavonoids with known radical scavenging capacity, which was assessed via the DPPH assay. The most highly heat‐induced metabolite was (glycosylated) propanediol, which is widely used in industry as an anti‐freeze. To our knowledge, this is the first report on its response to stress in plants. The identified metabolites and candidate genes provide novel targets for the development of heat‐tolerant wheat. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
5. Toward the Allelopathy of Peganum sp. and Related Chemical Constituents in Agriculture.
- Author
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Bitchagno, Gabin Thierry M., El Bouhssini, Mustapha, Mahdi, Ismail, Ward, Jane L., and Sobeh, Mansour
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ALLELOPATHY ,AGRICULTURE ,METABOLITES ,PLANT extracts ,WEED control - Abstract
The genus Peganum constitutes one of the perennial groups of plants of semi-arid regions across the world. It produces diverse classes of metabolites with claimed valuable pharmacological applications. Despite the key chemical and biological properties of the genus, its allelopathy or that of one of its species has not been reviewed yet. Thus, the present survey aims to report the agricultural applications of extracts, fractions, and compounds from the genus Peganum. This work was based on the available literature related to both the Peganum genus and agriculture, which were generated from available high-impact scientific engines. The plants in this genus contain a large group of secondary metabolites including phenolic compounds, terpenes, and N -containing compounds. Alkaloids, as the main components of the extracts from plants in the genus, were identified as the major active principles. The toxicity of Peganum isolates against plants and related pest organisms was also reviewed. Extract preparations from species of Peganum were listed among insecticidal and herbicidal allelochemicals used for crop protection. The review also tried to contextualize natural products in agriculture. Peganum plant extracts and fractions have showed significant potential in weed and crops management, soil health, and biopesticide production. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
6. A willow UDP-glycosyltransferase involved in salicinoid biosynthesis.
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Kulasekaran, Satish, Cerezo-Medina, Sergio, Harflett, Claudia, Lomax, Charlotte, Jong, Femke de, Rendour, Amelie, Ruvo, Gianluca, Hanley, Steven J, Beale, Michael H, and Ward, Jane L
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ASPIRIN ,WILLOWS ,METABOLITES ,BIOSYNTHESIS ,TRANSGENIC plants ,GLYCOSYLTRANSFERASES ,POPLARS - Abstract
The salicinoids are phenolic glycosides that are characteristic secondary metabolites of the Salicaceae, particularly willows and poplars. Despite the well-known pharmacology of salicin, that led to the development of aspirin >100 years ago, the biosynthetic pathways leading to salicinoids have yet to be defined. Here, we describe the identification, cloning, and biochemical characterization of SpUGT71L2 and SpUGT71L3—isozymic glycosyltransferases from Salix purpurea— that function in the glucosylation of ortho -substituted phenols. The best substrate in vitro was salicyl-7-benzoate. Its product, salicyl-7-benzoate glucoside, was shown to be endogenous in poplar and willow. Together they are inferred to be early intermediates in the biosynthesis of salicortin and related metabolites in planta. The role of this UDP-glycosyltransferase was confirmed via the metabolomic analysis of transgenic plants produced by RNAi knockdown of the poplar orthologue (UGT71L1) in the hybrid clone Populus tremula×P. alba , INRA 717-1B4. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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7. Phenolics from Medicinal and Aromatic Plants: Characterisation and Potential as Biostimulants and Bioprotectants.
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Kisiriko, Musa, Anastasiadi, Maria, Terry, Leon Alexander, Yasri, Abdelaziz, Beale, Michael Henry, and Ward, Jane Louise
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MEDICINAL plants ,PHENOLS ,AROMATIC plants ,CROP growth ,PLANT extracts ,METABOLITES ,INSECTICIDES - Abstract
Biostimulants and bioprotectants are derived from natural sources and can enhance crop growth and protect crops from pests and pathogens, respectively. They have attracted much attention in the past few decades and contribute to a more sustainable and eco-friendly agricultural system. Despite not having been explored extensively, plant extracts and their component secondary metabolites, including phenolic compounds have been shown to have biostimulant effects on plants, including enhancement of growth attributes and yield, as well as bioprotectant effects, including antimicrobial, insecticidal, herbicidal and nematicidal effects. Medicinal and aromatic plants are widely distributed all over the world and are abundant sources of phenolic compounds. This paper reviews the characterisation of phenolic compounds and extracts from medicinal and aromatic plants, including a brief overview of their extraction, phytochemical screening and methods of analysis. The second part of the review highlights the potential for use of phenolic compounds and extracts as biostimulants and bioprotectants in agriculture as well as some of the challenges related to their use. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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8. Localization of Major Ephedra Alkaloids in Whole Aerial Parts of Ephedrae Herba Using Direct Analysis in Real Time-Time of Flight-Mass Spectrometry.
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Yun, Nayoung, Kim, Hye Jin, Park, Sang Cheol, Park, Geonha, Kim, Min Kyoung, Choi, Young Hae, Jang, Young Pyo, and Ward, Jane
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MATRIX-assisted laser desorption-ionization ,MASS spectrometry ,EPHEDRA ,METABOLITES ,SPECTROMETRY ,PLANT metabolites - Abstract
Mass spectrometry-based molecular imaging has been utilized to map the spatial distribution of target metabolites in various matrixes. Among the diverse mass spectrometry techniques, matrix-assisted laser desorption/ionization-mass spectrometry (MALDI-MS) is the most popular for molecular imaging due to its powerful spatial resolution. This unparalleled high resolution, however, can paradoxically act as a bottleneck when the bio-imaging of large areas, such as a whole plant, is required. To address this issue and provide a more versatile tool for large scale bio-imaging, direct analysis in real-time-time of flight-mass spectrometry (DART-TOF-MS), an ambient ionization MS, was applied to whole plant bio-imaging of a medicinal plant, Ephedrae Herba. The whole aerial part of the plant was cut into 10–20 cm long pieces, and each part was further cut longitudinally to compare the contents of major ephedra alkaloids between the outer surface and inner part of the stem. Using optimized DART-TOF-MS conditions, molecular imaging of major ephedra alkaloids of the whole aerial part of a single plant was successfully achieved. The concentration of alkaloids analyzed in this study was found to be higher on the inner section than the outer surface of stems. Moreover, side branches, which are used in traditional medicine, represented a far higher concentration of alkaloids than the main stem. In terms of the spatial metabolic distribution, the contents of alkaloids gradually decreased towards the end of branch tips. In this study, a fast and simple macro-scale MS imaging of the whole plant was successfully developed using DART-TOF-MS. This application on the localization of secondary metabolites in whole plants can provide an area of new research using ambient ionization mass spectroscopy and an unprecedented macro-scale view of the biosynthesis and distribution of active components in medicinal plants. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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9. Microbial Transformation of Prenylquercetins by Mucor hiemalis.
- Author
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Han, Fubo, Xiao, Yina, Lee, Ik-Soo, and Ward, Jane
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MUCOR ,QUERCETIN ,CHEMICAL structure ,MICROBIAL metabolites ,ISOPRENYLATION ,SOLUBILITY ,METABOLITES - Abstract
Quercetin, one of the most widely distributed flavonoids, has been found to show various biological activities including antioxidant, anticancer, and anti-inflammatory effects. It has been reported that bioactivity enhancement of flavonoids has often been closely associated with nuclear prenylation, as shown in 8-prenylquercetin and 5′-prenylquercetin. It has also been revealed in many studies that the biological activities of flavonoids could be improved after glucosylation. Three prenylated quercetins were prepared in this study, and microbial transformation was carried out in order to identify derivatives of prenylquercetins with increased water solubility and improved bioavailability. The fungus M. hiemalis was proved to be capable of converting prenylquercetins into more polar metabolites and was selected for preparative fermentation. Six novel glucosylated metabolites were obtained and their chemical structures were elucidated by NMR and mass spectrometric analyses. All the microbial metabolites showed improvement in water solubility. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
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10. Microbial Transformation of Licochalcones.
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Xiao, Yina, Han, Fubo, Lee, Ik-Soo, and Ward, Jane
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ASPERGILLUS niger ,FILAMENTOUS fungi ,ISOMERIZATION ,METABOLITES ,SPECTRUM analysis - Abstract
Microbial transformation of licochalcones B (1), C (2), D (3), and H (4) using the filamentous fungi Aspergillus niger and Mucor hiemalis was investigated. Fungal transformation of the licochalcones followed by chromatographic separations led to the isolation of ten new compounds 5–14, including one hydrogenated, three dihydroxylated, three expoxidized, and three glucosylated metabolites. Their structures were elucidated by combined analyses of UV, IR, MS, NMR, and CD spectroscopic data. Absolute configurations of the 2″,3″-diols in the three dihydroxylated metabolites were determined by ECD experiments according to the Snatzke's method. The trans-cis isomerization was observed for the metabolites 7, 11, 13, and 14 as evidenced by the analysis of their
1 H-NMR spectra and HPLC chromatograms. This could be useful in better understanding of the trans-cis isomerization mechanism of retrochalcones. The fungal transformation described herein also provides an effective method to expand the structural diversity of retrochalcones for further biological studies. [ABSTRACT FROM AUTHOR]- Published
- 2020
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- View/download PDF
11. System-wide molecular evidence for phenotypic buffering in Arabidopsis.
- Author
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Jingyuan Fu, Keurentjes, Joost J. B., Bouwmeester, Harro, America, Twan, Verstappen, Francel W. A., Ward, Jane L., Beale, Michael H., de Vos, Ric C. H., Dijkstra, Martijn, Scheltema, Richard A., Johannes, Frank, Koornneef, Maarten, Vreugdenhil, Dick, Breitling, Rainer, and Jansen, Ritsert C.
- Subjects
ARABIDOPSIS ,PROTEINS ,METABOLITES ,MESSENGER RNA ,POLYACRYLAMIDE gel electrophoresis ,GAS chromatography ,LIQUID chromatography ,SPECTROMETRY - Abstract
We profiled 162 lines of Arabidopsis for variation in transcript, protein and metabolite abundance using mRNA microarrays, two-dimensional polyacrylamide gel electrophoresis, gas chromatography time-of-flight mass spectrometry, liquid chromatography quadrupole time-of-flight mass spectrometry, and proton nuclear magnetic resonance. We added all publicly available phenotypic data from the same lines and mapped quantitative trait loci (QTL) for 40,580 molecular and 139 phenotypic traits. We found six QTL hot spots with major, system-wide effects, suggesting there are six breakpoints in a system otherwise buffered against many of the 500,000 SNPs. [ABSTRACT FROM AUTHOR]
- Published
- 2009
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- View/download PDF
12. Lipid metabolites as regulators of airway smooth muscle function
- Author
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Clarke, Deborah L., Dakshinamurti, Shyamala, Larsson, Anna-Karin, Ward, Jane E., and Yamasaki, Akira
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METABOLITES , *LIPID metabolism , *AIRWAY (Anatomy) , *SMOOTH muscle , *ASTHMA , *ISOPROSTANES , *PROSTANOIDS , *LEUKOTRIENES , *PHYSIOLOGY , *THERAPEUTICS - Abstract
Abstract: Compelling evidence identifies airway smooth muscle (ASM) not only as a target but also a cellular source for a diverse range of mediators underlying the processes of airway narrowing and airway hyperresponsiveness in diseases such as asthma. These include the growing family of plasma membrane phospholipid-derived polyunsaturated fatty acids broadly characterised by the prostaglandins, leukotrienes, lipoxins, isoprostanes and lysophospholipids. In this review, we describe the enzymatic and non-enzymatic biosynthetic pathways of these lipid mediators and how these are influenced by drug treatment, oxidative stress and airways disease. Additionally, we outline their cognate receptors, many of which are expressed by ASM. We describe potential deleterious and protective roles for these lipid mediators in airway inflammatory and remodelling processes by describing their effects on diverse functions of ASM in asthma that have the potential to contribute to asthma pathogenesis and symptoms. These functions include contractile tone development, cytokine and extracellular matrix production, and cellular proliferation and migration. [Copyright &y& Elsevier]
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- 2009
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13. Comparative compositions of metabolites and dietary fibre components in doughs and breads produced from bread wheat, emmer and spelt and using yeast and sourdough processes.
- Author
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Shewry, Peter R., America, Antoine H.P., Lovegrove, Alison, Wood, Abigail J., Plummer, Amy, Evans, Jessica, van den Broeck, Hetty C., Gilissen, Luud, Mumm, Roland, Ward, Jane L., Proos, Zsuzsan, Kuiper, Petra, Longin, C. Friedrich H., Andersson, Annica A.M., Philip van Straaten, Jan, Jonkers, Daisy, and Brouns, Fred
- Subjects
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BREAD , *FLOUR , *GLUTELINS , *WHEAT , *DOUGH , *YEAST , *SOURDOUGH bread , *METABOLITES - Abstract
• Blended grains from varieties of emmer, spelt and bread wheat were compared. • Wholemeal flours were processed using sourdough and yeast systems. • Flours, doughs and breads were analysed to determine fibre and metabolites. • Small differences were observed between the products from the three types of wheat. • The greatest differences were between the between sourdough and yeast breads. Wholemeal flours from blends of bread wheat, emmer and spelt were processed into bread using yeast-based and sourdough fermentation. The bread wheat flour contained significantly higher concentrations of total dietary fibre and fructans than the spelt and emmer flours, the latter having the lowest contents. Breadmaking using sourdough and yeast systems resulted in changes in composition from flour to dough to bread including increases in organic acids and mannitol in the sourdough system and increases in amino acids and sugars (released by hydrolysis of proteins and starch, respectively) in both processing systems. The concentrations of fructans and raffinose (the major endogenous FODMAPs) were reduced by yeast and sourdough fermentation, with yeast having the greater effect. Both systems resulted in greater increases in sugars and glycerol in emmer than in bread wheat and spelt, but the significance of these differences for human health has not been established. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
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