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Historically, a large number of taxonomic forms has been recognized within Nearctic pikas (Lagomorpha: Ochotonidae; Ochotona), including up to 13 species and 37 subspecies. After 1965, 2 species and 37 forms have been recognized: the monotypic O. collaris of Alaska, British Columbia, Yukon, and Northwest Territories, and O. princeps, with 36 subspecies spread throughout western Canada and the western United States. The 36 subspecies of O. princeps have been distinguished by subtle differences, particularly in pelage coloration and body size, within the highly fragmented distribution of the species on isolated "islands" of cool, rocky habitat. However, molecular phylogenetic studies (allozyme electrophoresis and sequencing of both mitochondrial and nuclear genomes) indicate the existence of 5 phylogenetic lineages within O. princeps. The cohesiveness of each lineage has been reinforced during glacial stages by introgressive hybridization among currently isolated populations within each lineage. In contrast, the low level of cranial variation and lack of consistent differentiation in cranial characters, pelage coloration, or body size among the 5 lineages indicates idiosyncratic interlocality variation due to high inbreeding within highly isolated populations, genetic drift, and possibly selection for common traits. Examination of allozymic, morphological, and nuclear DNA data indicates previous introgressive hybridization among several of the lineages, probably associated with contact during the Last Glacial Maximum. Herein we characterize morphometric variation between and among O. collaris (n = 164) and O. princeps (n = 1,999) and revise the subspecific taxonomy of O. princeps to 5 subspecies based on molecular phylogenetic lineages, at least 3 of which are known to possess a unique dialect in the short call: O. p. princeps (Northern Rocky Mountains), O. p. fenisex (Coast Mountains and Cascade Range), O. p. saxatilis (Southern Rocky Mountains), O. p. schisticeps (Sierra Nevada and Great Basin), and O. p. uinta (Uinta Mountains and Wasatch Range of central Utah). These 5 subspecies represent evolutionarily meaningful units for consideration of possible management applications if populations of O. princeps are imperiled by human activities. [ABSTRACT FROM AUTHOR]

The Southern Coahuila Filter-Barrier (SCFB) effectively subdivides the mammalian fauna of the Mesa del Norte, the northern and most extensive section of the Mexican Altiplano. Pocket gophers of the genus Cratogeomys north and south of this filter-barrier have been informally recognized as 2 distinct species, C. castanops and C. goldmani, respectively. Support for species recognition derives from early morphological comparisons and recent chromosomal and ectoparasite studies. Contradictory conclusions based on the only comprehensive morphometric study have prevented formal recognition of C. goldmani. A morphometric reevaluation based on ratiotransformed data reveals that the previous analysis was unduly biased by size, an ecophenotypically plastic character. When this factor is removed, morphometric variation is fully concordant with chromosomal diploid number and sequence data of mitochondrial and nuclear DNA. We provide synonymies and descriptions for C. goldmani apart from C. castanops, and revise the number of subspecies from a total of 26 to 2 subspecies in each species. The SCFB is most effective in its central portion (Desierto Mayán), and least effective in its western portion (Río Nazas), which should be geographically broadened to include the neighboring Río Aguanaval. [ABSTRACT FROM AUTHOR]

The northern pygmy mouse, Baiomys taylori, occurs throughout the Trans-Mexican Volcanic Belt and southern Altiplano of central Mexico and extends northward in 3 projections into northern Mexico and the United States. We used mitochondrial DNA (from the cytochrome-b and NADH dehydrogenase 2 genes) and morphological data to assess diversity within B. taylori across its geographic range in relation to recognized subspecies and putative physiographic filter-barriers. Our results indicate 5 distinct mitochondrial clades despite little morphological variation across the species' geographic range. The Sierra Madre Oriental and Sierra Madre Occidental separate clades representing the eastern (Gulf coastal lowlands), central (Altiplano), and Pacific coastal lowlands, which appear to be divided into 3 major mitochondrial clades. Based on a preliminary analysis of cranial morphology, we are able to reject the Balcones Escarpment of Texas as an impediment to the well-documented recent northern expansion of the species, while we are unable to reject a causal role of filter-barriers elsewhere in subspecific differentiation. Revision of subspecific taxonomy must await further genetic sampling, particularly along the western and southeastern portions of the species' distribution. [ABSTRACT FROM AUTHOR]

Pocket gophers of the genus Orthogeomys show unusually high morphological and ecological diversity compared to other genera in the family Geomyidae. Whereas this diverse group once was divided into 3 genera (Merriam 1895), a revision by Russell (1968) recognized only Orthogeomys, with Merriam's original genera relegated to subgeneric status as Heterogeomys, Macrogeomys, and Orthogeomys. Recent studies have called into question the monophyly of Orthogeomys, as well as the validity of 4 currently recognized Orthogeomys species. To date, the taxonomic validity of only 1 of these species has been verified (Hafner et al. 2014). In this analysis, the first to include all 11 recognized species of the genus, we examine 3 mitochondrial and 2 nuclear gene sequences (4,352 base pairs) and analyze cranial morphology to explore relationships within the genus. Our data support a taxonomic revision that restricts the genus Orthogeomys to a single species (O. grandis) and combines the subgenera Heterogeomys and Macrogeomys into the resurrected genus, Heterogeomys (7 species). In addition, 3 currently recognized species of Orthogeomys are synonymized as follows: O. cuniculus with O. grandis; H. thaeleri with H. dariensis; and H. matagalpae with H. cherriei. A synonymy and a key to the species of the genera Orthogeomys and Heterogeomys are provided. [ABSTRACT FROM AUTHOR]

A study of chromosomal variation in the Mexican pocket gopher Cratogeomys merriami revealed differences in diploid number that correspond to 3 major genetic and morphological clades within the species. Each of these 3 clades is diagnosable based on multiple characters, including chromosomal diploid number, quantitative and qualitative morphological characters, and mitochondrial DNA. Accordingly, we restrict the name C. merriami (Thomas) to include only pocket gophers of this genus from the states of México, México D.F., northern Morelos, and west-central Puebla. We resurrect the species name C. fulvescens Merriam to represent members of this genus from southern Tlaxcala, east-central Puebla, and parts of west-central Veracruz. Finally, we resurrect the species name C. perotensis Merriam to represent members of this genus from southern Hidalgo, northern Tlaxcala, north-central Puebla, and parts of west-central Veracruz. Based on the observation that differences in diploid number usually signal reproductive isolation between populations of pocket gophers, we hypothesize that C. merriami, C. fulvescens, and C. perotensis are reproductively incompatible. We provide synonymies and descriptions for these 3 species, along with a key to the C. castanops species group to which these species belong. [ABSTRACT FROM AUTHOR]

The genus Cratogeomys, particularly members of the Cratogeomys gymnurus species group, account for much of the high species diversity of pocket gophers in the Trans-Mexican Volcanic Belt. Recent molecular studies of this species group have shown strong discordance between genetically defined clades and current species taxonomy. Accordingly, we investigated relationships among the 5 species in the C. gymnurus species group using mitochondrial and nuclear DNA, chromosomes, and morphological characters. Although quantitative morphometrics provided little discrimination among species or clades within this group, the molecular data sets were consistent in identifying 5 allopatric clades, none of which corresponded to any of the 5 currently recognized species. Four of these 5 genetically defined clades lack clear diagnosability, and so are grouped into the single polytypic species, C. fumosus. The fifth clade is diagnosable based on multiple characters, including nuclear genotype, chromosomal diploid number, parasite fauna, and qualitative morphological characters. Accordingly, we resurrect Merriam's (1895) species planiceps to represent members of this clade, which occurs in the Volcán de Toluca and Valle de Bravo regions of central Mexico. Based on the observation that differences in diploid number usually signal reproductive isolation between populations of pocket gophers, we hypothesize that C. fumosus and C. planiceps are reproductively incompatible. We provide synonymies and descriptions for these 2 species, along with a key to this species group, which is now called the C fumosus species group. [ABSTRACT FROM AUTHOR]