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A trait-based approach is adopted to understand the responses of the soil nematode food web following cover crops incorporated into the soil, i.e., afterlife effect of plant. We conducted an in situ microcosm experiment with two cover crops including leguminous Astragalus sinicus L. (A. sinicus), characterized by high nutrient content, and gramineous Lolium multiflorum Lam (L. multiflorum), characterized by high C and lignin content, representing the acquisitive and conservative side of the economic spectrum, respectively. Furthermore, two incorporation rates were set to represent low and high biomass production of cover crops that could be incorporated into the soil. Soil main microbial groups, nematode food web, and physicochemical properties were analyzed at weeks 4 and 18 after cover crops incorporated into the soil. Results showed that, regardless of time, cover crops affected the abundance and composition of the soil nematode food web. L. multiflorum supported higher nematode abundance and more complex nematode food web than A. sinicus, charactering with higher fungivore/bacterivore, predator/prey, maturity index, and structure index, particularly under the high incorporation rates. In addition, A. sinicus improved much more resource availability (mineral N and dissolved organic C) than L. multiflorum. Together, the quantity and quality of plant residues jointly drive soil food web structure, and a trait-based framework facilitates the mechanical understanding of afterlife effect of plant on soil ecosystems. [ABSTRACT FROM AUTHOR]

Anthropogenic land use is threatening global biodiversity. As one of the most abundant animals on Earth, nematodes occupy several key positions in belowground food webs and contribute to many ecosystem functions and services. However, the effects of land use on nematode abundance and its determinants remain poorly understood at a global scale.To characterize nematodes' responses to land use across trophic groups, we used a dataset of 6,825 soil samples globally to assess how nematode abundance varies among regional land‐use types (i.e. primary vegetation, secondary vegetation, pasture, cropland and urban) and local land‐use intensities (i.e. human‐managed or not). We also quantified the interactive effects of land use and environmental predictors (i.e. mean annual temperature, annual precipitation, soil organic carbon, soil pH, global vegetation biomass and global vegetation productivity) on nematode abundance.We found that total nematode abundance and the abundance of bacterivores, fungivores, herbivores, omnivores and predators generally increased or were not affected under management across land‐use types. Specifically, the most numerically abundant bacterivores were higher in managed than in unmanaged secondary vegetation habitats and urban areas, and herbivores were more abundant in managed than in unmanaged primary and secondary vegetation habitats. Furthermore, the numbers of significant environmental predictors of nematode abundance were reduced and the magnitude and the direction of the predictors were changed under management. We also found that nematode abundance was more variable and less determined by environmental factors in urban than in other land‐use types.These findings challenge the view that human land use decreases animal abundance across trophic groups, but highlight that land use is altering the trophic composition of soil nematodes and its relationships with the environment at the global scale. [ABSTRACT FROM AUTHOR]

Both contemporary and historical factors are documented to be crucial in regulating species diversity and distribution. Soil fauna contribute substantially to global biodiversity and ecosystem functioning, while it is unclear whether and to what extent historical factors shape their diversity patterns. Here, we used soil nematodes as a model organism to test historical effects on soil fauna and to investigate the relative importance of climatic, soil, and historical factors. Based on nematode distribution data in 16 natural sites at a large scale (ranging from 22 to 40°N) in mainland China, we conducted elastic net regression model to test the effects of climatic (e.g., mean and seasonality of temperature/precipitation), soil (e.g., soil carbon, nitrogen, and pH), and historical (e.g., temperature/precipitation anomaly and the velocity of the change since the Last Glacial Maximum) variables on nematode genus richness and Shannon's diversity. Additionally, variation partitioning was used to determine the contribution of the three predictor sets to the explanation of both Jaccard and Bray–Curtis community dissimilarity. We found that climate generally explained more variations in both diversity and composition than soil and historical predictors in our samples. We also showed that although historical factors (e.g., temperature change velocity) were correlated with nematode diversity and composition, the pure effects of these historical factors were negligible. In other words, the historical effects were commonly represented by their interactions with current climatic and soil factors within our selected sites. Our results indicated that contemporary factors, especially climate, may outperform historical factors in regulating soil nematode diversity patterns at large scales. [ABSTRACT FROM AUTHOR]

Anthropogenic conversion of natural to agricultural land reduces aboveground biodiversity. Yet, the overall consequences of land‐use changes on belowground biodiversity at large scales remain insufficiently explored. Furthermore, the effects of conversion on different organism groups are usually determined at the taxonomic level, while an integrated investigation that includes functional and phylogenetic levels is rare and absent for belowground organisms. Here, we studied the Earth's most abundant metazoa—nematodes—to examine the effects of conversion from natural to agricultural habitats on soil biodiversity across a large spatial scale. To this aim, we investigated the diversity and composition of nematode communities at the taxonomic, functional, and phylogenetic level in 16 assemblage pairs (32 sites in total with 16 in each habitat type) in mainland China. While the overall alpha and beta diversity did not differ between natural and agricultural systems, all three alpha diversity facets decreased with latitude in natural habitats. Both alpha and beta diversity levels were driven by climatic differences in natural habitats, while none of the diversity levels changed in agricultural systems. This indicates that land conversion affects soil biodiversity in a geographically dependent manner and that agriculture could erase climatic constraints on soil biodiversity at such a scale. Additionally, the functional composition of nematode communities was more dissimilar in agricultural than in natural habitats, while the phylogenetic composition was more similar, indicating that changes among different biodiversity facets are asynchronous. Our study deepens the understanding of land‐use effects on soil nematode diversity across large spatial scales. Moreover, the detected asynchrony of taxonomic, functional, and phylogenetic diversity highlights the necessity to monitor multiple facets of soil biodiversity in ecological studies such as those investigating environmental changes. [ABSTRACT FROM AUTHOR]

We conducted a microcosm experiment with soil being sterilized, reinoculated with native microbial community and subsequently manipulated the bacterivorous nematodes, including three treatments: without (CK) or with introducing one species of the two bacterivores characterized with different body size but similar c-p (colonizer-persister) value ( Rhabditis intermedia and Protorhabditis oxyuroides, accounted for 6 and 59% of bacterivores in initially undisturbed soil, respectively). We monitored the NO and CO emissions, soil properties, and especially quantified gross N transformation rates using N tracing technique after the 50 days incubation. No significant differences were observed on soil NH and NO concentrations between the CK and two bacterivores, but this was not the case for gross N transformation rates. In comparison to CK, R. intermedia did not affect soil N transformation rates, while P. oxyuroides significantly increased the rates of mineralization of organic N to NH , oxidation of NH to NO , immobilization of NO to organic N and dissimilatory NO reduction to NH . Furthermore, the mean residence time of NH and NO pool was greatly lowered by P. oxyuroides, suggesting it stimulated soil N turnover. Such stimulatory effect was unrelated to the changes in abundance of bacteria and ammonia-oxidizing bacteria (AOB). In contrast to CK, only P. oxyuroides significantly promoted soil NO and CO emissions. Noticeably, bacterivores increased the mineralization of recalcitrant organic N but decreased soil δC and δN values, in particular for P. oxyuroides. Combining trait-based approach and isotope-based analysis showed high potential in moving forward to a mechanistic understanding of bacterivore-mediated N cycling. [ABSTRACT FROM AUTHOR]

In agricultural ecosystems, most crop cultivars are bred for pest resistance with the aim of resisting aboveground herbivores, but it is unclear if this resistance also affects abundance, composition, and activity of underground pests and content of soil labile pools. A fully factorial greenhouse experiment was carried out, using four rice cultivars with distinct resistance to shoot herbivore brown planthopper, Nilaparvata lugens, with and without rice root nematodes, Hirschmanniella spp., to test two hypotheses: (1) rice cultivars resistant to brown planthopper are more susceptible to rice root nematodes and (2) rice root nematodes of resistant cultivars cause greater modification of labile pools of rhizosphere soil than those of susceptible cultivars by inducing more leakage of plant metabolites. Nematode abundance, soluble sugar and soluble amino acid contents of plant, and microbial biomass C and N, dissolved organic C and N, and soluble sugar and amino acid contents of rhizosphere soil were analyzed. The abundance of rice root nematodes substantially increased under all rice cultivars following root nematode inoculation. Rice cultivar resistance to brown planthopper did not affect the numbers of rice root nematodes but decreased negative effects of nematodes on root growth, shoot soluble sugar and amino acid contents, and labile pools of rhizosphere soil, probably implying that integrated complex mechanisms other than only resource allocation were involved in rice resistance to aboveground and belowground herbivores. Our study will contribute to a better understanding of aboveground-belowground interactions and to the development of integrated pest managements by considering belowground ecosystem responses in crop systems. [ABSTRACT FROM AUTHOR]

Abstract: Plant-mediated effects of aboveground herbivory on the belowground ecosystem are well documented, but less attention has been paid to agro-ecosystems and in particular how crop cultivars with different traits (i.e. resistance to pests) shape such interactions. A fully factorial experiment was conducted using four rice cultivars with different insect-resistance, with and without the aboveground herbivore Nilaparvata lugens (brown planthopper), and to test two hypotheses (1) aboveground herbivory affects the soil microbial biomass and nematode community by altering plant performance and soil resource availability and (2) herbivory effects will depend on cultivar resistance traits. Our results suggested that cultivar resistance mediated both herbivory intensity and herbivore effects on plant performance. N. lugens decreased the availability of soil resources (soluble sugars, amino acids, organic acids, dissolved organic carbon and nitrogen), microbial biomass and percentages of bacterivores when feeding on a susceptible cultivar but increased them in a resistant cultivar. However, total nematode abundance and the percentage of plant-parasitic nematodes responded in the opposite way, increasing under a susceptible cultivar and decreasing under a resistant cultivar. The development of plant-parasites under resistant cultivars before aboveground herbivory might contribute to their resistance traits. Our findings provide evidence that N. lugens significantly reversed the pattern of soil resource availability, microbial biomass and nematode community structure (abundance and trophic composition) across cultivars with distinct resistance. In the presence of aboveground pests, the agronomic use of resistant rice cultivars could also control populations of plant-parasites and promote soil resource availability, further extended to higher trophic level of soil food web. [Copyright &y& Elsevier]

Abstract: We grew plants in soil amended with either finely ground (<0.2 mm) or larger pieces (4 × 5 mm2) of maize leaves. Finely ground material will be mineralized faster; hence nitrogen is released faster in the soil. We inoculated the soil with the plant growth inhibiting bacterium Arthrobacter BEM463, a relatively poor food source for bacterial feeders, and the plant growth promoter Sphingopyxis BEM760 which is a good food source. Protozoa and nematodes were introduced separately or in combination. In soil with larger maize leaf pieces (low turnover, slow nitrogen release), bacterial feeders generally increased plant nitrogen uptake and growth. In systems with finely ground material (high turnover, fast nitrogen release), plants hardly benefited from presence of grazers; bacterial mineralization activity alone probably provided enough N for the plants. The harmful Arthrobacter thrived better when grazed by protozoa than when grazed by nematodes, probably because the selective protozoa could avoid it, which resulted in reduced plant performance. We suggest that bacterial feeders generally increase plant performance when nutrients are limited. At high nutrient availability, however, bacterial feeders promote grazer resistant bacteria, and, if these bacteria are harmful to plants, the net effect of bacterial feeders on plant growth can be negative. [Copyright &y& Elsevier]

Purpose: Prometryne with moderate to low mobility in soil is a ubiquitous environmental pollutant in water and soil. Bioremediation is widely used to remove pollutants from contaminated soil. Bacterial-feeding nematodes have been tested on the decomposition of soil organic matter and the release of nutrients through their interaction with soil microorganisms, but little attention has been paid to their effects on the removal of herbicides in soil. In this study, we investigated the effects of bacterial-feeding nematodes ( Cephalobus Bastian) on the dissipation of prometryne and microbial activity in prometryne contaminated soil. Materials and methods: Cultured with prometryne for a period of 6 months, prometryne-degrading bacteria strains P-1 and P-2 were isolated from sediments obtained from Anhui Huaxing Chemical Industry Co., Ltd. (Anhui Province, China). Bacterial-feeding nematodes were reared on Nematode Growth Medium agar plates (NGM) supplemented with prometryne for 5 months. Gnotobiotic microcosm experiments were conducted by inoculating both nematodes and prometryne-degrading bacteria strains P-1 ( Ochrobactrum sp.) and P-2 ( Bacillus sp.) into the contaminated soil. Soil samples were analyzed for prometryne concentration, the number of bacteria and nematodes, basal soil respiration, and enzyme activities. Results and discussion: The results show that (1) about 50-66% of the prometryne is dissipated in the treatments with nematodes and the dissipation rate is raised by 5-7% compared with the treatments without nematodes. The nematodes have positive effects on the dissipation of prometryne through their interaction with bacteria in soil; (2) the nematode grazing can increase the population size of bacteria; and (3) the introduction of nematodes can enhance basal soil respiration and soil enzyme activities, that is, soil microbial activity. Conclusions: The inoculation of nematodes enhanced microbial activity in contaminated soils and accelerated the dissipation of prometryne, and thus nematodes can be used in restoration of contaminated sites by accelerating pollutants dissipation in the future. [ABSTRACT FROM AUTHOR]

Abstract: Responses of nematode assemblages and soil function (short-term decomposition) in restored and degraded soil following an experimental disturbance (copper, chloroform, heat or drying) were monitored for 65 days. We tested the hypotheses: restoration enhanced the measured soil parameters; stability to disturbance was higher in degraded soil due to induced tolerance; and whether changes of the nematode assemblage were related to soil function. Even after disturbance, greater nematode abundance (>150 vs >10 per 100g soil), nematode richness (D′>1.0 vs >0.4) and function (>1.0 vs >0.05mg CO2 g−1 week−1) were maintained in restored than in degraded soil, respectively. An increase in nematode enrichment index (from 60 to >75) following all disturbances was attributed to the relatively high abundance of tolerant fungivores. The greater stability of the nematode structure index in degraded soil following heat and drying (120% and 125% respectively of the control), than in restored soil (90% and 30% of control) was due to a higher proportion of tolerant omnivores and carnivores. Thus some higher trophic level nematodes, with high c–p values, were tolerant to disturbance. However, stability of function was greater for restored than degraded soil, with a reduction over time in the degraded soil regardless of disturbance type. The differences in the responses of nematodes and soil function to disturbance suggest that nematodes could provide complementary insights into soil stability. [Copyright &y& Elsevier]

Emerging knowledge of plant–soil biotic interactions and the role of soil organisms in shaping the world aboveground is advancing our understanding of ecosystem function. Nematodes are the most abundant animals on Earth. They are morphologically and functionally diverse, and play key roles in ecosystem function, making them ideal for developing a trait-based understanding of adaptation to the environment and for assessing their contributions to ecosystem function. Trait-based approaches allow us to capture the functional attributes of organisms beyond their taxonomic identity, provide insights on evolutionary fitness, and make global comparisons possible. We propose the nematode economics spectrum (NES), analogous to the plant economic spectrum, which describes the tradeoffs among growth, reproduction, and survival, potentially enabling us to predict the impacts of global change on nematode ecological strategies and the associated changes in ecosystem function. Trait-based approaches are being increasingly adopted to understand species' ecological strategies and how organisms influence ecosystem function. Trait-based research on soil organisms, however, remains poorly developed compared with that for plants. The abundant and diverse soil nematodes are prime candidates to advance trait-based approaches belowground, but a unified trait framework to describe nematode ecological strategies and assess their linkages with ecosystem function is lacking. We categorized nematode traits as morphological, physiological, life history, and community clusters, and proposed the nematode economics spectrum (NES) to better understand nematode ecological strategies and their association with ecosystem function. We argue that bridging the NES and the plant economics spectrum will facilitate a more holistic understanding of ecosystem carbon and nutrient cycling under global change. [ABSTRACT FROM AUTHOR]

Abstract: The influence of earthworms on nematodes and protozoan communities was determined during the wheat phase of a six year rice–wheat rotation agro-ecosystem. Experimental plots in the rotation had five treatments, i.e. incorporation or mulching of maize residues with or without added earthworms and a control. The addition of maize residues to soil strongly affected the abundance and community structure of nematodes and protozoa in the absence of earthworms. The presence of earthworms gave significantly lower total nematode numbers at all soil depths following maize residue incorporation than the same treatment without earthworms, and also gave lower (although not significantly) total nematode numbers in the upper soil layer following maize residue mulching than the same treatment without earthworms. This was mainly due to a significant decrease in bacterial-feeding nematode numbers. Earthworms also strongly affected the distribution of the number of total nematodes and two trophic groups (bacterial and plant feeders) with soil depth. In the presence of earthworms, total protozoan and flagellate numbers significantly increased at all soil depths following both incorporation and mulching of maize residues, while numbers of amoebae increased only when maize residues were mulched. Additionally, in earthworm casts total nematode numbers (mainly bacterial and fungal feeders) were significantly higher, whereas total protozoa numbers (mainly flagellates and amoebae) were significantly lower than that in soil from 0 to 5cm layer. These results indicated that earthworm activity could affect the abundance and community structure of microfauna, and change their distribution between soil layers and cast material, depending on the mode of application of organic residues. [Copyright &y& Elsevier]

Abstract: Microcosm experiments were carried out to study the effects of bacterial-feeding nematodes and prometryne on soil bacterial communities in contaminated soil. Prometryne (5 or 10mgkg−1 dry soil, that is, P5 or P10) and bacterial-feeding nematodes (5 or 10 individuals g−1 dry soil, that is, N5 or N10), singly and in combination (P5N5, P5N10, P10N5, P10N10), were added to a nematode-free soil. An uncontaminated nematode-free soil was studied for comparison (Control). Bacterial-feeding nematode grazing boosted soil enzyme activities in contaminated soils, thus speeding up prometryne degradation. In the initial stage of the experiment, prometryne enhanced the soil enzyme activities too, but served the opposite purpose later. Denaturing gradient gel electrophoresis (DGGE) analysis indicated that prometryne contamination and nematode grazing over the incubation period exerted an obvious impact on Species richness (S), Shannon–Wiener index (H′) and Evenness (E H ) of soil bacteria, which increased initially, then decreased and increased again later. The cluster analysis of DGGE profiles showed that the similarity of soil bacterial communities in all treatments with indigenous microbes, P5, P5N5, P5N10, P10, P10N5, and P10N10 and the Control was 75%, 44%, 78% and 49% at Day 0, Day 8, Day 18 and Day 30, respectively. Compared to the Control, DGGE profiles displayed a varying characteristic bands pattern in all treatments over the incubation period with certain bands present in the treatments while not in the Control and vice versa, suggesting that bacterial-feeding nematode grazing and prometryne contamination affected soil bacterial communities evidently. Consequently, when added to contaminated soil, bacterial-feeding nematodes can contribute to restoration of contaminated sites by degrading toxic compounds like prometryne through enhanced microbial activity. [Copyright &y& Elsevier]

Abstract: The effects of bacterial-feeding nematodes on nitrification and the ammonia-oxidizing bacteria (AOB) community composition were studied in soil microcosms. Sterilized soils were inoculated with mixed soil bacteria (obtained by filtering) or with bacteria and bacterial-feeding nematodes, after which the dynamic inorganic nitrogen concentration was measured weekly. After 28 days of incubation, denaturing gradient gel electrophoresis (DGGE) based on PCR amplification of the amoA gene was used to analyze the AOB community composition. In addition, a clone library from the amoA gene fragments was established using clones randomly selected and sequenced from the two treatments. The results showed that the presence of bacterial-feeding nematodes led to significantly greater NH4 + and NO3 − contents over the entire incubation period, indicating that bacterial-feeding nematodes promoted both N mineralization and nitrification. The results of DGGE showed that the AOB community composition was significantly changed in the presence of bacterial-feeding nematodes. Furthermore, the sequencing results suggested that Nitrosospira sp. was the dominant species in the treatment without nematodes, while Nitrosomonas sp. and Nitrosospira sp. were the dominant species in the treatment with nematodes. Such changes in the AOB community may be one of explanation of the important role that nematodes play in promoting nitrification. [Copyright &y& Elsevier]

Abstract: We prepared soil with greater populations of bacterial-feeding nematodes either by stimulating the native populations of the soil, adding an additional mixed community of nematodes, or by adding Caenorhabditis elegans, to investigate the effects of bacterial-feeding nematodes on root morphology, soil auxin (indolyl-3-acetic acid—IAA) concentrations and microbial community structure. In the presence of enhanced bacterial-feeding nematode populations, tomato plants had a more highly branched root system with longer and thinner roots. Root system development was greater with native nematodes than C. elegans. The changes of root morphology were accompanied by an increase of soil IAA content and an altered microbial community structure. Bacterial-feeding nematodes may have affected plant growth by stimulating hormone production through grazing-induced changes to the soil microbial community. [Copyright &y& Elsevier]

Anthropogenic activities are supposed to reduce global biodiversity and negatively influence the development of diverse groups in the tree of life. Yet how agricultural management shapes the diversity of microscopic organisms and their evolution in the soil, especially at large spatial scale, remains unknown. Here, we investigated how agricultural land-use affected the biodiversity and the underlying evolutionary events of soil nematodes by comparing their communities in natural and agricultural soils covering a latitudinal transect spanning 2500 km across China. In natural habitats, nematode phylogenetic and taxonomic diversity and species richness showed a hump-shaped relationship with latitudes and peaked at 30° N, while in agricultural habitats those community matrices did not change across the studied latitudinal spectrum. Meanwhile, agricultural management reduced both diversity and richness of nematodes with the effect being more pronounced in subtropical zones. However, evolutionary diversification rates were greater in agricultural than in natural habitats across the entire latitudinal range. This was associated with reductions of soil organic carbon and nitrogen as well as shifts of nematode community compositions towards rapidly evolving taxa (r–strategists) in agricultural habitats. Together, our results suggest that the relatively unfavorable environmental status induced by agricultural management could accelerate the community-level speciation rates of nematodes through enriching rapidly evolving taxon. These insights increase our understanding of the systematic impacts of agricultural activities on soil biodiversity that might facilitate conservation and restoration policies for the purpose of sustainable agriculture. • Phylogenetic comparative methods were applied for soil nematode diversity analysis. • Speciation rates was greater in r-strategists. • Community weighted speciation are greater in agricultural habitats. • Speciation rates were related to soil organic carbon and pH. [ABSTRACT FROM AUTHOR]