1. Identification of cold tumor induction-related markers in pancreatic cancer and the clinical implication of PCDH7.
- Author
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Mochida Y, Ohuchida K, Zhang B, Yamada Y, Tsutsumi C, Kubo A, Oyama K, Shinkawa T, Iwamoto C, Torata N, Abe T, Ideno N, Ikenaga N, Nakata K, Oda Y, and Nakamura M
- Subjects
- Humans, Mice, Animals, Male, Female, Prognosis, Lymphocytes, Tumor-Infiltrating immunology, Gene Expression Regulation, Neoplastic, Pancreatic Neoplasms pathology, Pancreatic Neoplasms genetics, Pancreatic Neoplasms metabolism, Pancreatic Neoplasms immunology, Cadherins genetics, Cadherins metabolism, Protocadherins, Carcinoma, Pancreatic Ductal pathology, Carcinoma, Pancreatic Ductal genetics, Carcinoma, Pancreatic Ductal immunology, Carcinoma, Pancreatic Ductal metabolism, Biomarkers, Tumor genetics, Biomarkers, Tumor metabolism, Tumor Microenvironment immunology, CD8-Positive T-Lymphocytes immunology, CD8-Positive T-Lymphocytes metabolism
- Abstract
Purpose: Pancreatic ductal adenocarcinoma (PDAC) is considered a "cold" tumor because the tumor immune microenvironment (TIME) exhibits poor intratumoral T-cell infiltration. This study aimed to identify the marker genes associated with induction of cold TIME in PDAC cells., Methods: We orthotopically transplanted 10 primary cultures of PDAC derived from KrasG12D/+; Trp53R172H/+; Pdx-1-Cre (KPC) mice into immunocompetent mice and evaluated TIME by immunohistochemistry (IHC) staining of CD8. We divided primary cultures into two groups: cold TIME group with low CD8
+ T-cell infiltration and a hot TIME group with high infiltration. RNA sequencing was performed to identify specific genes in the cold TIME group, and single-cell RNA sequencing (scRNA-seq) data was used for validation. IHC was performed to evaluate expressions in human PDAC samples., Results: We identified six genes specific in PDAC cells to the cold TIME group by RNA sequencing; these were defined as "cold tumor induction-related genes". Human PDAC scRNA-seq data revealed that cold tumor induction-related genes were significantly and negatively correlated with the number of CD8+ T-cells (p = 0.0341). These genes included protocadherin 7 (PCDH7). High expression of PCDH7 significantly and negatively correlated with the number of CD8+ T-cells in scRNA-seq (p = 0.0474) and IHC (p = 0.0110) data using human PDAC samples. PCDH7 was an independent factor for poor prognosis in PDAC (overall survival: hazard ratio = 2.07, p = 0.0367)., Conclusion: PCDH7 is a prognostic marker associated with CD8+ T-cell infiltration for PDAC patients., Competing Interests: Declarations. Ethical approval: This study was approved by the Ethics Committee of Kyushu University (approval number: 22002-00). All animal experiments were conducted following the guidelines of the institutional animal committee of Kyushu University (approval number: A22-128 and A23-026). Consent to participate: Written informed consent was waived owing to the retrospective analysis of the study. Competing interests: The authors declare no competing interests., (© 2025. The Author(s).)- Published
- 2025
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