1. Genomics-Driven Discovery of Chlorinated Cyclic Hexapeptides Ulleungmycins A and B from a Streptomyces Species
- Author
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Jae-Hyuk Jang, Sung-Kyun Ko, Kyung Taek Heo, Bo Yeon Kim, In Ja Ryoo, Mina Jang, Won Gon Kim, Jong Seog Ahn, Jun-Pil Jang, Byeongsan Lee, Sangkeun Son, Jong Won Kim, and Young-Soo Hong
- Subjects
Methicillin-Resistant Staphylococcus aureus ,0301 basic medicine ,Staphylococcus aureus ,Stereochemistry ,030106 microbiology ,Pharmaceutical Science ,Microbial Sensitivity Tests ,Gram-Positive Bacteria ,medicine.disease_cause ,Peptides, Cyclic ,01 natural sciences ,Streptomyces ,Analytical Chemistry ,03 medical and health sciences ,Nonribosomal peptide ,Flavins ,Drug Discovery ,Gene cluster ,Hydrocarbons, Chlorinated ,medicine ,Amino Acid Sequence ,Peptide Synthases ,Nuclear Magnetic Resonance, Biomolecular ,Peptide sequence ,Pharmacology ,chemistry.chemical_classification ,Whole genome sequencing ,Molecular Structure ,biology ,010405 organic chemistry ,Organic Chemistry ,Tryptophan ,Pathogenic bacteria ,Genomics ,Staphylococcal Infections ,biology.organism_classification ,Anti-Bacterial Agents ,0104 chemical sciences ,Amino acid ,Complementary and alternative medicine ,chemistry ,Biochemistry ,Molecular Medicine ,Methicillin Resistance ,Oxidoreductases ,Two-dimensional nuclear magnetic resonance spectroscopy ,Chromatography, Liquid - Abstract
Analysis of the genome sequence of Streptomyces sp. KCB13F003 showed the presence of a cryptic gene cluster encoding flavin-dependent halogenase and nonribosomal peptide synthetase. Pleiotropic approaches using multiple culture media followed by LC-MS-guided isolation and spectroscopic analysis enabled the identification of two new chlorinated cyclic hexapeptides, ulleungmycins A and B (1 and 2). Their structures, including absolute configurations, were determined by 1D and 2D NMR techniques, advanced Marfey's analysis, and GITC derivatization. The new peptides, featuring unusual amino acids 5-chloro-l-tryptophan and d-homoleucine, exhibited moderate antibacterial activities against Gram-positive pathogenic bacteria including methicillin-resistant and quinolone-resistant Staphylococcus aureus.
- Published
- 2017
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