1. Rufibacter hautae sp. nov., a red-pigmented bacterium from freshwater lake sediment, and proposal of Rufibacter quisquiliarum as a latter heterotypic synonym of Rufibacter ruber .
- Author
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Zhou J, Ma WW, Qu JH, Li HF, Yang BB, Qu LB, and Wang LF
- Subjects
- Bacterial Typing Techniques, Bacteroidetes isolation & purification, Base Composition, China, DNA, Bacterial genetics, Fatty Acids chemistry, Phospholipids chemistry, Pigmentation, RNA, Ribosomal, 16S genetics, Sequence Analysis, DNA, Vitamin K 2 analogs & derivatives, Vitamin K 2 chemistry, Bacteroidetes classification, Geologic Sediments microbiology, Lakes microbiology, Phylogeny
- Abstract
A taxonomic identification using a polyphasic approach was performed on strain NBS58-1
T , which was isolated from the interfacial sediment of Taihu Lake in China. Strain NBS58-1T was Gram-stain-negative, aerobic, non-spore-forming and catalase-positive. Phylogenetic analyses based on 16S rRNA gene and three housekeeping genes ( rpoB , gyrB and dnaK ) sequences supported the position that strain NBS58-1T should be classified within the genus Rufibacter . The 16S rRNA gene sequence of strain NBS58-1T possessed the highest similarity to Rufibacter sediminis H-1T (96.60 %), followed by Rufibacter glacialis MDT1-10-3T (96.17 %). And the ANI value between strain NBS58-1T and R. glacialis MDT1-10-3T was 79.3 %. The respiratory quinone was menaquinone 7 (MK-7). The major cellular fatty acids comprised iso-C15 : 0 and summed feature 3. Phosphatidylethanolamine, two unidentified phospholipids and four unidentified lipids were the main polar lipids. The genomic DNA G+C content was 51.3 mol%. Based on phenotypic features and phylogenetic position, a novel species with the name Rufibacter hautae sp. nov. is proposed. The type strain is NBS58-1T =(KACC 21309T =MCCC 1K04037T ). We also proposed Rufibacter quisquiliarum as a latter heterotypic synonym of Rufibacter ruber .- Published
- 2020
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