9 results on '"Yen, Kuo-Yang"'
Search Results
2. Imaging prediction of KRAS mutation in patients with rectal cancer through deep metric learning using pretreatment [18F]Fluorodeoxyglucose positron emission tomography/computed tomography.
- Author
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Wu, Kuo-Chen, Chen, Shang-Wen, Hsieh, Te-Chun, Yen, Kuo-Yang, Chang, Chao-Jen, Kuo, Yu-Chieh, Hsu, Yu-Ju, Chang, Ruey-Feng, and Kao, Chia-Hung
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POSITRON emission tomography ,COMPUTED tomography ,RECTAL cancer ,RAS oncogenes ,DEEP learning ,MACHINE learning - Abstract
Objectives: To predict KRAS mutation in rectal cancer (RC) through computer vision of [18F]fluorodeoxyglucose (18F‐FDG) positron emission tomography (PET)/computed tomography (CT) by using metric learning (ML). Methods: This study included 160 patients with RC who had undergone preoperative PET/CT. KRAS mutation was identified through polymerase chain reaction analysis. This model combined ML with the deep‐learning framework to analyze PET data with or without CT images. The Batch Balance Wrapper framework and K‐fold cross‐validation were employed during the learning process. A receiver operating characteristic (ROC) curve analysis was performed to assess the model's predictive performance. Results: Genetic alterations in KRAS were identified in 82 (51%) tumors. Both PET and CT images were used, and the proposed model had an area under the ROC curve of 0.836 for its ability to predict a mutation status. The sensitivity, specificity, and accuracy were 75.3%, 79.3%, and 77.5%, respectively. When PET images alone were used, the area under the curve was 0.817, whereas the sensitivity, specificity, and accuracy were 73.2%, 79.6%, and 76.2%, respectively. Conclusions: The ML model presented herein revealed that baseline 18F‐FDG PET/CT images could provide supplemental information to determine KRAS mutation in RC. Additional studies are required to maximize the predictive accuracy. Advances in knowledge: The results of the ML model presented herein indicate that baseline 18F‐FDG PET/CT images could provide supplemental information for determining KRAS mutation in RC. The predictive accuracy of the model was 77.5% when both image types were used and 76.2% when PET images alone were used. Additional studies are required to maximize the predictive accuracy. [ABSTRACT FROM AUTHOR]
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- 2023
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3. Metabolic Imaging Phenotype Using Radiomics of [18F]FDG PET/CT Associated with Genetic Alterations of Colorectal Cancer.
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Chen, Shang-Wen, Shen, Wei-Chih, Chen, William Tzu-Liang, Hsieh, Te-Chun, Yen, Kuo-Yang, Chang, Jan-Gowth, and Kao, Chia-Hung
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COLON cancer ,POSITRON emission tomography ,GENETIC mutation ,DRUG therapy ,CARCINOGENESIS - Abstract
Purpose: To understand the association between genetic mutations and radiomics of 2-deoxy-2-[18F]fluoro-D-glucose ([18F]FDG) positron emission tomography (PET)/x-ray computed tomography (CT) in patients with colorectal cancer (CRC).Procedures: This study included 74 CRC patients who had undergone preoperative [18F]FDG PET/CT. A total of 65 PET/CT-related features including intensity, volume-based, histogram, and textural features were calculated. High-resolution melting methods were used for genetic mutation analysis.Results: Genetic mutants were found in 21 KRAS tumors (28 %), 31 TP53 tumors (42 %), and 17 APC tumors (23 %). Tumors with a mutated KRAS had an increased value at the 25th percentile of maximal standardized uptake value (SUVmax) within their metabolic tumor volume (MTV) (P < .0001; odds ratio [OR] 1.99; 95 % confidence interval [CI] 1.37-2.90) and their contrast from the gray-level cooccurrence matrix (P = .005; OR 1.52; 95 % CI 1.14-2.04). A mutated TP53 was associated with an increased value of short-run low gray-level emphasis derived from the gray-level run length matrix (P = .001; OR 243006.0; 95 % CI 59.2-996,872,313). APC mutants exhibited lower low gray-level zone emphasis derived from the gray-level zone length matrix (P = .006; OR < .0001; 95 % CI 0.000-0.22).Conclusion: PET/CT-derived radiomics can provide supplemental information to determine KRAS, TP53, and APC genetic alterations in CRC. [ABSTRACT FROM AUTHOR]- Published
- 2019
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4. Correlation of pretreatment F-FDG PET tumor textural features with gene expression in pharyngeal cancer and implications for radiotherapy-based treatment outcomes.
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Chen, Shang-Wen, Shen, Wei-Chih, Lin, Ying-Chun, Chen, Rui-Yun, Hsieh, Te-Chun, Yen, Kuo-Yang, and Kao, Chia-Hung
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HEAD & neck cancer ,HETEROGENEITY ,POSITRON emission tomography ,COMPUTED tomography ,GENE expression - Abstract
Purpose: This study investigated the correlation of the matrix heterogeneity of tumors on F-fluorodeoxyglucose positron emission tomography-computed tomography (PET-CT) with gene-expression profiling in patients with pharyngeal cancer and determined the prognostic factors for radiotherapy-based treatment outcomes. Methods: We retrospectively reviewed the records of 57 patients with stage III-IV oropharyngeal or hypopharyngeal cancer who had completed definitive therapy. Four groups of the textural features as well as 31 indices were studied in addition to maximum standard uptake value, metastatic tumor volume, and total lesion glycolysis. Immunohistochemical data from pretreatment biopsy specimens ( Glut1, CAIX, VEGF, HIF-1α, EGFR, Ki-67, Bcl-2, CLAUDIN-4, YAP-1, c-Met, and p16) were analyzed. The relationships between the indices and genomic expression were studied, and the robustness of various textural features relative to cause-specific survival and primary relapse-free survival was analyzed. Results: The overexpression of VEGF was positively associated with the increased values of the matrix heterogeneity obtained using gray-level nonuniformity for zone (GLNUz) and run-length nonuniformity (RLNU). Advanced T stage ( p = 0.01, hazard ratio [HR] = 3.38), a VEGF immunoreactive score of >2 ( p = 0.03, HR = 2.79), and a higher GLNUz value ( p = 0.04, HR = 2.51) were prognostic factors for low cause-specific survival, whereas advanced T stage, a HIF-1α staining percentage of ≥80%, and a higher GLNUz value were prognostic factors for low primary-relapse free survival. Conclusions: The overexpression of VEGF was associated with the increased matrix index of GLNUz and RLNU. For patients with pharyngeal cancer requiring radiotherapy, the treatment outcome can be stratified according to the textural features, T stage, and biomarkers. [ABSTRACT FROM AUTHOR]
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- 2017
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5. Immunohistochemical overexpression of hypoxia-induced factor 1α associated with slow reduction in fluoro-2-deoxy- D-glucose uptake for chemoradiotherapy in patients with pharyngeal cancer.
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Chen, Shang-Wen, Lin, Ying-Chun, Chen, Rui-Yun, Hsieh, Te-Chun, Yen, Kuo-Yang, Liang, Ji-An, Yang, Shih-Neng, Wang, Yao-Ching, Chen, Ya-Huey, Chow, Nan-Haw, and Kao, Chia-Hung
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PHARYNGEAL cancer ,CHEMORADIOTHERAPY ,IMMUNOHISTOCHEMISTRY ,GENETIC overexpression ,HYPOXIA-inducible factor 1 ,FLUORODEOXYGLUCOSE F18 ,POSITRON emission tomography ,CANCER treatment - Abstract
Background: This study examined genomic factors associated with a reduction in fluoro-2-deoxy- D-glucose (FDG) uptake during positron emission tomography-computed tomography (PET-CT) for definitive chemoradiotherapy (CRT) in patients with pharyngeal cancer. Methods: The pretreatment and interim PET-CT images of 25 patients with advanced pharyngeal cancers receiving definitive CRT were prospectively evaluated. The maximum standardized uptake value (SUV) of the interim PET-CT and the reduction ratio of the SUV (SRR) between the two images were measured. Genomic data from pretreatment incisional biopsy specimens ( SLC2A1, CAIX, VEGF, HIF1A, BCL2, Claudin-4, YAP1, MET, MKI67, and EGFR) were analyzed using tissue microarrays. Differences in FDG uptake and SRRs between tumors with low and high gene expression were examined using the Mann-Whitney test. Cox regression analysis was performed to examine the effects of variables on local control. Results: The SRR of the primary tumors (SRR-P) was 0.59 ± 0.31, whereas the SRR of metastatic lymph nodes (SRR-N) was 0.54 ± 0.32. Overexpression of HIF1A was associated with a high iSUV of the primary tumor ( P < 0.001) and neck lymph node ( P = 0.04) and a low SRR-P ( P = 0.02). Multivariate analysis revealed that patients who had tumors with low SRR-P or high HIF1A expression levels showed inferior local control. Conclusion: In patients with pharyngeal cancer requiring CRT, HIF1A overexpression was positively associated with high interim SUV or a slow reduction in FDG uptake. Prospective trials are needed to determine whether the local control rate can be stratified using the HIF1A level as a biomarker and SRR-P. [ABSTRACT FROM AUTHOR]
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- 2016
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6. Use of pretreatment metabolic tumour volumes to predict the outcome of pharyngeal cancer treated by definitive radiotherapy.
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Kao, Chia-Hung, Lin, Shih-Chieh, Hsieh, Te-Chun, Yen, Kuo-Yang, Yang, Shih-Neng, Wang, Yao-Ching, Liang, Ji-An, Hua, Chun-Hung, and Chen, Shang-Wen
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CANCER patients ,PHARYNGEAL cancer ,TUMOR growth ,RADIOTHERAPY ,POSITRON emission tomography ,RETROSPECTIVE studies ,CANCER treatment - Abstract
Purpose: The aim of the study was to investigate the predictive role of pretreatment metabolic volume (MTV) in pharyngeal cancer (PC) patients treated with definitive (chemo) radiotherapy. Methods: This retrospective analysis enrolled 64 patients with PC treated with (chemo) radiotherapy. All patients received pretreatment fluorodeoxyglucose (FDG) positron emission tomography (PET)/CT. Four PET segmentation methods were used, namely applying an isocontour at a standardized uptake value (SUV) of either 2.5 or 3.0 (MTV2.5 and MTV3.0) or using fixed thresholds of either 40 or 50 % (MTV40 %, MTV50 %) of the maximum intratumoural FDG activity. Disease-free survival (DFS) and primary relapse-free survival (PRFS) were examined according to cutoffs of the median values for each MTV and the gross tumour volume (GTVp). Independent prognosticators were identified by Cox regression analysis. Results: With a median follow-up of 24 months, 19 patients died, and 26 patients experienced tumour relapse at primary sites. Multivariate analysis of the DFS showed that MTV2.5 > 13.6 ml was the only predictor of relapse [ p = 0.011, hazard ratio = 2.69, 95 % confidence interval (CI) 1.25-5.76]. The independent predictor for PRFS was MTV2.5 > 13.6 ml ( p = 0.003, hazard ratio = 3.76, 95 % CI 1.57-8.92), whereas GTVp > 15.5 ml had a marginal impact on PRFS ( p = 0.06, hazard ratio = 3.54, 95 % CI 0.97-11.85). Patients having tumours with MTV2.5 > 13.6 ml had a significantly inferior 2-year PRFS compared with patients who had lower MTV2.5 tumours (39 vs 72 %, respectively, p = 0.001). Conclusion: For PC patients treated with definitive (chemo)radiotherapy, pretreatment MTV2.5 volume achieved the best predictive value for primary recurrence, and the same value was also a prognosticator for DFS. [ABSTRACT FROM AUTHOR]
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- 2012
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7. Neuroimaging findings in a brain with Niemann-Pick type C disease.
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Huang, Jei-Yie, Peng, Sing-Fung, Yang, Chih-Chao, Yen, Kuo-Yang, Tzen, Kai-Yuan, and Yen, Ruoh-Fang
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BRAIN imaging ,NIEMANN-Pick diseases ,LIPIDOSES ,LOW density lipoproteins ,MAGNETIC resonance imaging of the brain ,CELLULAR signal transduction ,PERIAQUEDUCTAL gray matter ,POSITRON emission tomography ,DIFFERENTIAL diagnosis ,GASTROSTOMY ,MAGNETIC resonance imaging ,NEUROLOGIC examination ,DISEASE progression ,DIAGNOSIS - Abstract
Niemann-Pick type C disease (NPC) is a rare autosomal recessive lipid storage disorder caused by impaired cellular functions in processing and transporting low-density lipoprotein-cholesterol. In this report, we present magnetic resonance imaging (MRI), magnetic resonance spectrography (MRS) and 18-fluoro-2-deoxyglucose positron emission tomography (PET) imaging results for a 22-year-old male NPC patient. The patient''s two MRI studies (at age 19 years and 22 years) demonstrated progressive changes of brain atrophy that were more prominent at the frontal lobes, and hyperintense signals in bilateral parietal-occipital periventricular white matter. MRS (at age 19 years) revealed no significant decrease in N-acetyl aspartate/choline ratio in the left frontal central white matter. PET (at age 22 years) showed significant bilateral hypometabolism in the prefrontal cortex and dorsomedial thalamus, and hypermetabolism in the parietal-occipital white matter, lenticular nucleus of the basal ganglia, cerebellum and pons. The imaging findings noted by MRI, MRS and 18-fluoro-2-deoxyglucose PET offered a possible supplementary explanation for the clinical neurological symptoms of this NPC patient. [Copyright &y& Elsevier]
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- 2011
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8. Which FDG/PET parameters of the primary tumors in colon or sigmoid cancer provide the best correlation with the pathological findings?
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Chen, Shang-Wen, Chen, William Tzu-Liang, Wu, Yi-Chen, Yen, Kuo-Yang, Hsieh, Te-Chun, Lin, Tze-Yi, and Kao, Chia-Hung
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POSITRON emission tomography , *PREOPERATIVE care , *COLON cancer patients , *COLON cancer treatment , *PATHOLOGY , *TUMOR growth , *GLYCOLYSIS - Abstract
Abstract: Background To compare 18F-fluoro-2-deoxdeoxyglucose (FDG) positron emission tomography (PET) related parameters of primary colon or sigmoid cancer (CSC) with pathological findings. Methods Seventy-seven CSC patients who have undergone preoperative PET computed tomograms (PET/CT) are included in this study. Maximum PET-based tumor length (TL) and tumor width (TW) are determined using several auto-segmentation methods, and various thresholds of metabolic tumor volume (MTV) and total lesion glycolysis (TLG) are measured. The PET-based TL and TW are compared with maximum pathological length and width on the pathological specimen. Results Using a 30% threshold level for maximum uptake of TL (TL30%) and TW (TW30%) yield results that provide an optimal match with maximum pathological length (R =0.81, p <0.001) and width (R =0.70, p <0.001). TW30% was an independent factor for predicting pathological T3 or T4 stages (OR=1.26, 95% CI=1.07–1.47, p =0.01). The receiver-operating characteristic curves show MTV at a fixed threshold of 40% maximum uptake (MTV40%), and TW30% achieved better correlation with the advanced pathological T stage. No associations with positive N stage were observed. Conclusion Pretreatment PET/CT is a useful tool for predicting the final pathological findings for CSC patients requiring surgical procedures. [Copyright &y& Elsevier]
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- 2013
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9. Clinically unrecognized pulmonary aspiration during gastrointestinal endoscopy with sedation: A potential pitfall interfering the performance of 18F-FDG PET for cancer screening
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Hsieh, Te-Chun, Wu, Yu-Chin, Ding, Hueisch-Jy, Wang, Chih-Hsiu, Yen, Kuo-Yang, Sun, Shung-Shung, Yeh, Jun-Jun, and Kao, Chia-Hung
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GASTROINTESTINAL system , *ENDOSCOPY , *CONSCIOUS sedation , *POSITRON emission tomography , *CANCER diagnosis , *RETROSPECTIVE studies , *LUNG diseases , *DISEASE incidence - Abstract
Abstract: Purpose: We found several cases with unexpected pulmonary abnormalities on the 18F-FDG PET scan after the gastrointestinal endoscopy with sedation during a compact health check-up course, interfering the interpretations of 18F-FDG PET scan for cancer screening. The current studies aimed to analyze the incidence and the clinical relevance of this pulmonary finding. Materials and methods: From June to December 2009, 127 subjects undergoing the sequential gastrointestinal endoscopy with sedation and 18F-FDG PET scan within 48h as part of routine health check-up were retrospectively enrolled in this study. The incidence of abnormal pulmonary findings and their SUVmax of FDG were calculated and correlated with the clinical manifestations. Results: Five subjects had abnormal 18F-FDG PET findings but pulmonary symptoms were only found in 2. The SUVmax did not seem to reflect the severity of pulmonary symptoms or the need of intervention. Although the incidence of unrecognized pulmonary aspiration featuring inflammation detected by the 18F-FDG PET scan was high (3.94%, 5/127), the incidence of events needed intervention remained low (0.79%, 1/127), similar to those previously reported literatures. Conclusions: Although higher incidence of pulmonary aspiration in this study, it probably reflects the better sensitivity of 18F-FDG PET for inflammation. The low incidence of clinical events needed intervention may still reflect the safety of sedation used for gastrointestinal endoscopy. Proper arrangement of the sequential examinations if subjects need both gastrointestinal endoscopy with sedation and 18F-FDG PET is important to reduce the interference degrading the performance of 18F-FDG PET in cancer screening, diagnosis or staging. [Copyright &y& Elsevier]
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- 2011
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