15 results on '"Supattapone, Surachai"'
Search Results
2. Structural Studies of the Scrapie Prion Protein by Electron Crystallography
- Author
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Wille, Holger, Michelitsch, Melissa D., Guénebaut, Vincent, Supattapone, Surachai, Serban, Ana, Cohen, Fred E., Agard, David A., and Prusiner, Stanley B.
- Published
- 2002
3. A single protective polymorphism in the prion protein blocks cross‐species prion replication in cultured cells.
- Author
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Arshad, Hamza, Patel, Zeel, Amano, Genki, Li, Le yao, Al‐Azzawi, Zaid A. M., Supattapone, Surachai, Schmitt‐Ulms, Gerold, and Watts, Joel C.
- Subjects
SCRAPIE ,SMALL molecules ,PRIONS ,MONOCLONAL antibodies ,PROTEINS ,GENETIC variation ,AMINO acids ,HAMSTERS - Abstract
The bank vole (BV) prion protein (PrP) can function as a universal acceptor of prions. However, the molecular details of BVPrP's promiscuity for replicating a diverse range of prion strains remain obscure. To develop a cultured cell paradigm capable of interrogating the unique properties of BVPrP, we generated monoclonal lines of CAD5 cells lacking endogenous PrP but stably expressing either hamster (Ha), mouse (Mo), or BVPrP (M109 or I109 polymorphic variants) and then challenged them with various strains of mouse or hamster prions. Cells expressing BVPrP were susceptible to both mouse and hamster prions, whereas cells expressing MoPrP or HaPrP could only be infected with species‐matched prions. Propagation of mouse and hamster prions in cells expressing BVPrP resulted in strain adaptation in several instances, as evidenced by alterations in conformational stability, glycosylation, susceptibility to anti‐prion small molecules, and the inability of BVPrP‐adapted mouse prion strains to infect cells expressing MoPrP. Interestingly, cells expressing BVPrP containing the G127V prion gene variant, identified in individuals resistant to kuru, were unable to become infected with prions. Moreover, the G127V polymorphic variant impeded the spontaneous aggregation of recombinant BVPrP. These results demonstrate that BVPrP can facilitate cross‐species prion replication in cultured cells and that a single amino acid change can override the prion‐permissive nature of BVPrP. This cellular paradigm will be useful for dissecting the molecular features of BVPrP that allow it to function as a universal prion acceptor. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
4. Full restoration of specific infectivity and strain properties from pure mammalian prion protein.
- Author
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Burke, Cassandra, Walsh, Daniel, Steele, Alexander, Agrimi, Umberto, Di Bari, Michele Angelo, Watts, Joel C., and Supattapone, Surachai
- Subjects
PRIONS ,PROTEIN folding ,MAMMAL diseases ,POST-translational modification ,RECOMBINANT proteins - Abstract
The protein-only hypothesis predicts that infectious mammalian prions are composed solely of PrP
Sc , a misfolded conformer of the normal prion protein, PrPC . However, protein-only PrPSc preparations lack significant levels of prion infectivity, leading to the alternative hypothesis that cofactor molecules are required to form infectious prions. Here, we show that prions with parental strain properties and full specific infectivity can be restored from protein-only PrPSc in vitro. The restoration reaction is rapid, potent, and requires bank vole PrPC substrate, post-translational modifications, and cofactor molecules. To our knowledge, this represents the first report in which the essential properties of an infectious mammalian prion have been restored from pure PrP without adaptation. These findings provide evidence for a unified hypothesis of prion infectivity in which the global structure of protein-only PrPSc accurately stores latent infectious and strain information, but cofactor molecules control a reversible switch that unmasks biological infectivity. [ABSTRACT FROM AUTHOR]- Published
- 2019
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- View/download PDF
5. In Situ Photodegradation of Incorporated Polyanion Does Not Alter Prion Infectivity.
- Author
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Piro, Justin R., Harris, Brent T., and Supattapone, Surachai
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PHOTODEGRADATION ,ANIONS ,MOLECULES ,OLIGONUCLEOTIDES ,PROTEINS ,SUBSTRATES (Materials science) - Published
- 2011
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6. Trans-Dominant Inhibition of Prion Propagation In Vitro Is Not Mediated by an Accessory Cofactor.
- Author
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Geoghegan, James C., Miller, Michael B., Kwak, Aimee H., Harris, Brent T., and Supattapone, Surachai
- Subjects
PRION diseases ,PRIONS ,PROTEINS ,BIOLOGICAL assay ,RNA ,GENETIC mutation - Abstract
Previous studies identified prion protein (PrP) mutants which act as dominant negative inhibitors of prion formation through a mechanism hypothesized to require an unidentified species-specific cofactor termed protein X. To study the mechanism of dominant negative inhibition in vitro, we used recombinant PrP
C molecules expressed in Chinese hamster ovary cells as substrates in serial protein misfolding cyclic amplification (sPMCA) reactions. Bioassays confirmed that the products of these reactions are infectious. Using this system, we find that: (1) trans-dominant inhibition can be dissociated from conversion activity, (2) dominant-negative inhibition of prion formation can be reconstituted in vitro using only purified substrates, even when wild type (WT) PrPC is pre-incubated with poly(A) RNA and PrPSc template, and (3) Q172R is the only hamster PrP mutant tested that fails to convert into PrPSc and that can dominantly inhibit conversion of WT PrP at sub-stoichiometric levels. These results refute the hypothesis that protein X is required to mediate dominant inhibition of prion propagation, and suggest that PrP molecules compete for binding to a nascent seeding site on newly formed PrPSc molecules, most likely through an epitope containing residue 172. [ABSTRACT FROM AUTHOR]- Published
- 2009
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7. What makes a good prion?
- Author
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Saupe, Sven J. and Supattapone, Surachai
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PRIONS ,PROTEINS ,YEAST ,BIOMOLECULES ,ORGANIC compounds - Abstract
The article focuses on the functions of prion proteins. Prions could have both beneficial and harmful effects on cells. There is a need to study mammalian model systems to study the pathogenesis of clinical prion disease. A method has been devised to identify new anti-prion drugs using a yeast-based screen.
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- 2006
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8. Copper (II) ions potently inhibit purified PrPres amplification.
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Orem, Nicholas R., Geoghegan, James C., Deleault, Nathan R., Kascsak, Richard, and Supattapone, Surachai
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COPPER ions ,PROTEINS ,BIOMOLECULES ,PROTEOLYTIC enzymes ,PRION diseases ,COMMUNICABLE diseases ,ETIOLOGY of diseases - Abstract
The structural conversion of a host protein, PrP
C , into a protease-resistant isoform, PrPres, is the central event in the pathogenesis of infectious prion diseases. Purification of native PrPC molecules from hamster brain by either cation exchange or immobilized chelator chromatographic resins yielded preparations that supported efficient amplification of scrapie-induced PrPres in vitro. Using these purified preparations, we determined that in vitro PrPres amplification was inhibited by CuCl2 and ZnCl2 at IC50 concentrations of ∼400 nm and 10 μm, respectively. In contrast, 100 μm MnCl2 did not directly inhibit PrPres amplification or block Cu2+ -mediated inhibition. Additionally, the inhibition of PrPres amplification by Cu2+ ions could be reversed by addition of either neocuproine or imidazole. Cu2+ inhibited PrPres amplification in both the presence and absence of stimulatory polyanion molecules. These biochemical findings support the hypothesis that Cu2+ ions might regulate the pathogenesis of prion diseases in vivo. [ABSTRACT FROM AUTHOR]- Published
- 2006
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9. Cofactor molecules maintain infectious conformation and restrict strain properties in purified prions.
- Author
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Deleault, Nathan R., Walsh, Daniel J., Piro, Justin R., Fei Wang, Xinhe Wang, Ma, Jiyan, Rees, Judy R., and Supattapone, Surachai
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PRIONS ,MOLECULAR structure of prions ,PROTEIN conformation ,PROTEIN folding ,PROTEINS ,MAMMALS - Abstract
The article provides information related to a study on restriction of strain properties in purified prions. According to the study, Cofactor molecules can help in maintaining infectious conformation and restricting strain properties in prions. It informs that prions are formed by the misfolding of a normal cellular prion protein. It concludes that cofactor molecules play an essential role in determining the characteristics of mammalian prions including their infectivity andc structure.
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- 2012
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10. The ultrastructure of infectious L-type bovine spongiform encephalopathy prions constrains molecular models
- Author
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Holger Wille, Assunta Senatore, Simone Hornemann, Brian P. Tancowny, Xiongyao Wang, Sandor Dudas, Andrew Fang, Sara Amidian, Xinli Tang, Ester Vázquez-Fernández, Vineet Rathod, Adriano Aguzzi, Razieh Kamali-Jamil, Howard S. Young, University of Zurich, Supattapone, Surachai, and Wille, Holger
- Subjects
Models, Molecular ,PrPSc Proteins ,animal diseases ,2405 Parasitology ,Biochemistry ,Negative Staining ,Epitope ,law.invention ,Animal Diseases ,Prion Diseases ,Mice ,0302 clinical medicine ,Medical Conditions ,law ,Zoonoses ,Medicine and Health Sciences ,Electron Microscopy ,Biology (General) ,Staining ,0303 health sciences ,Microscopy ,Chemistry ,2404 Microbiology ,Immunogold labelling ,Negative stain ,3. Good health ,Encephalopathy, Bovine Spongiform ,Animal Prion Diseases ,Infectious Diseases ,Veterinary Diseases ,Research Article ,QH301-705.5 ,Prions ,Bovine spongiform encephalopathy ,Immunology ,10208 Institute of Neuropathology ,610 Medicine & health ,Mice, Transgenic ,Fibril ,Research and Analysis Methods ,Microbiology ,Bovine Spongiform Encephalopathy ,03 medical and health sciences ,1311 Genetics ,Virology ,mental disorders ,medicine ,1312 Molecular Biology ,Genetics ,Animals ,Molecular Biology ,030304 developmental biology ,2403 Immunology ,Biology and Life Sciences ,Proteins ,Electron Cryo-Microscopy ,RC581-607 ,medicine.disease ,nervous system diseases ,Membrane protein ,Specimen Preparation and Treatment ,Ultrastructure ,2406 Virology ,Amyloid Proteins ,570 Life sciences ,biology ,Parasitology ,Cattle ,Veterinary Science ,Electron microscope ,Immunologic diseases. Allergy ,Zoology ,030217 neurology & neurosurgery - Abstract
Bovine spongiform encephalopathy (BSE) is a prion disease of cattle that is caused by the misfolding of the cellular prion protein (PrPC) into an infectious conformation (PrPSc). PrPC is a predominantly α-helical membrane protein that misfolds into a β-sheet rich, infectious state, which has a high propensity to self-assemble into amyloid fibrils. Three strains of BSE prions can cause prion disease in cattle, including classical BSE (C-type) and two atypical strains, named L-type and H-type BSE. To date, there is no detailed information available about the structure of any of the infectious BSE prion strains. In this study, we purified L-type BSE prions from transgenic mouse brains and investigated their biochemical and ultrastructural characteristics using electron microscopy, image processing, and immunogold labeling techniques. By using phosphotungstate anions (PTA) to precipitate PrPSc combined with sucrose gradient centrifugation, a high yield of proteinase K-resistant BSE amyloid fibrils was obtained. A morphological examination using electron microscopy, two-dimensional class averages, and three-dimensional reconstructions revealed two structural classes of L-type BSE amyloid fibrils; fibrils that consisted of two protofilaments with a central gap and an average width of 22.5 nm and one-protofilament fibrils that were 10.6 nm wide. The one-protofilament fibrils were found to be more abundant compared to the thicker two-protofilament fibrils. Both fibrillar assemblies were successfully decorated with monoclonal antibodies against N- and C-terminal epitopes of PrP using immunogold-labeling techniques, confirming the presence of polypeptides that span residues 100–110 to 227–237. The fact that the one-protofilament fibrils contain both N- and C-terminal PrP epitopes constrains molecular models for the structure of the infectious conformer in favour of a compact four-rung β-solenoid fold., Author summary Bovine spongiform encephalopathy (BSE), also called “mad cow disease,” is a deadly neurodegenerative disease in cattle. BSE is caused by PrPSc, which is an aberrantly folded conformer of a normal protein in the host. PrPSc is an infectious protein and also referred to as a prion. BSE prions exist in three variants or strains: C-type BSE prions, which caused the epizootic “mad cow disease” outbreak, and two atypical forms L-type and H-type BSE prions, named according to their migration patterns during gel electrophoresis. For our investigations, we isolated L-type BSE prions from transgenic mouse brains and analyzed these samples using transmission electron microscopy and three-dimensional reconstruction techniques. Our study revealed that L-type BSE prions assemble into one- and two-protofilament containing amyloid fibrils and that the width of the two-protofilament fibrils is approximately twice that of one-protofilament fibrils. In addition, we labeled the L-type BSE fibrils at the ultrastructural level using specific anti-prion protein antibodies that recognize epitopes at both ends of the molecule. Our data agree with the previously proposed four-rung β-solenoid model for the structure of infectious PrPSc.
- Published
- 2021
11. Species-Dependent Differences in Cofactor Utilization for Formation of the Protease-Resistant Prion Protein in Vitro.
- Author
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Deleault, Nathan R., Kascsak, Richard, Geoghegan, James C., and Supattapone, Surachai
- Subjects
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PROTEINS , *RNA , *NUCLEASES , *PROTEOLYTIC enzymes , *NUCLEIC acids - Abstract
The cofactor preferences for in vitro propagation of the protease-resistant isoforms of the prion protein (PrPSc) from various rodent species were investigated using the serial protein misfolding cyclic amplification (sPMCA) technique. Whereas RNA molecules facilitate hamster PrP propagation. RNA and several other polyanions do not promote the propagation of mouse and vole PrPSc molecules. Pretreatment of crude Prnp0/0 (PrP knockout) brain homogenate with RNase A or micrococcal nuclease inhibited hamster but not mouse PrPSc propagation in a reconstituted system. Mouse PrPSc propagation could be reconstituted by mixing PrPC substrate with homogenates prepared from either brain or liver, but not from several other tissues that were tested. These results reveal species-specific differences in cofactor utilization for PrPSc propagation in vitro and also demonstrate the existence of an endogenous cofactor present in brain tissue not composed of nucleic acids. [ABSTRACT FROM AUTHOR]
- Published
- 2010
- Full Text
- View/download PDF
12. Protease-resistant Prion Protein Amplification Reconstituted with Partially Purified Substrates and Synthetic Polyanions.
- Author
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Deleault, Nathan R., Geoghegan, James C., Nishina, Koren, Kascsak, Richard, Williamson, R. Anthony, and Supattapone, Surachai
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PRIONS , *PROTEINS , *MAMMALS , *ANIONS , *CHRONIC wasting disease , *PRION diseases in animals - Abstract
Little is currently known about the biochemical mechanism by which induced prion protein (PrP) conformational change occurs during mammalian prion propagation. In this study, we describe the reconstitution of PrPres amplification in vitro using partially purified and synthetic components. Overnight incubation of purifled PrP27-30 and PrPC molecules at a molar ratio of 1:250 yielded ∼2-fold baseline PrPres amplification. Addition of various polyanionic molecules increased the level of PrPres amplification to ∼10-fold overall. Polyanionic compounds that stimulated purified PrPres amplification to varying degrees included synthetic, homopolymeric nucleic acids such as poly(A) and poly(dT), as well as non-nucleic acid polyanions, such as heparan sulfate proteoglycan. Size fractionation experiments showed that synthetic poly(A) polymers must be > 0.2 kb in length to stimulate purified PrPres amplification. Thus, one possible set of minimal components for efficient conversion of PrP molecules in vitro may be surprisingly simple, consisting of PrP27-30, PrPC, and a stimulatory polyanionic compound. [ABSTRACT FROM AUTHOR]
- Published
- 2005
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13. In Vitro Prion Protein Conversion in Detergent-Solubilized Membranes.
- Author
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Nishina, Koren, Deleault, Nathan R., Lucassen, Ralf W., and Supattapone, Surachai
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PRION diseases , *PROTEINS , *BIOLOGICAL membranes , *GLYCOPROTEINS , *PROTEOLYTIC enzymes , *COMMUNICABLE diseases - Abstract
A fundamental event in the pathogenesis of prion disease is the conversion of PrPC, a normal glycophosphatidyl-anchored glycoprotein, into an infectious isoform designated PrPSc. In a modified version of the protein misfolding cyclic amplification (PMCA) technique [Saborio et al. (2001) Nature 411, 810- 813], protease-resistant PrPSc-like molecules (PrPres) can be amplified in vitro in a species- and strain-specific manner from crude brain homogenates, providing a biochemical model of the prion conversion reaction [Lucassen et al. (2003) Biochemistry 42, 4127-4135]. In this study, we investigated the ability of enriched membrane subsets and detergent-solubilized membrane preparations to support PrPres amplification. Membrane fractionation experiments showed that purified synaptic plasma membrane preparations enriched in PrPC but largely depleted of late endosomal and lysosomal markers were sufficient to support PrPres amplification. Detergent solubilization experiments showed that a small group of select detergents could be used to produce soluble preparations that contain PrPC and fully support PrPres amplification. The stability of PrPres amplification ability in detergent-solubilized supernatants was dependent on detergent concentration. These results lead to the surprising conclusion that membrane attachment is not required for PrPC to convert efficiently into PrPres in vitro and also indicate that biochemical purification of PrPres amplification factors from brain homogenates is a feasible approach. [ABSTRACT FROM AUTHOR]
- Published
- 2004
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14. A bispecific immunotweezer prevents soluble PrP oligomers and abolishes prion toxicity
- Author
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Federica Mazzola, Valeria Eckhardt, Rocco D'Antuono, Manfredi Carta, Marco Bardelli, Simone Hornemann, Mattia Pedotti, Luca Simonelli, Adriano Aguzzi, Tommaso Virgilio, Luca Varani, Karl Frontzek, Santiago F. Gonzalez, University of Zurich, Supattapone, Surachai, and Varani, Luca
- Subjects
Physiology ,medicine.medical_treatment ,animal diseases ,2405 Parasitology ,Toxicology ,Pathology and Laboratory Medicine ,Molecular Dynamics ,Biochemistry ,Prion Diseases ,Animal Diseases ,Mice ,0302 clinical medicine ,Computational Chemistry ,Zoonoses ,Immune Physiology ,Cerebellum ,Antibodies, Bispecific ,Medicine and Health Sciences ,Biology (General) ,Enzyme-Linked Immunoassays ,Materials ,Cells, Cultured ,0303 health sciences ,Immune System Proteins ,biology ,Chemistry ,2404 Microbiology ,Proteases ,3. Good health ,Cell biology ,Enzymes ,Animal Prion Diseases ,Infectious Diseases ,Toxicity ,Physical Sciences ,Immunotherapy ,Antibody ,Research Article ,QH301-705.5 ,Prions ,Materials Science ,Immunology ,10208 Institute of Neuropathology ,610 Medicine & health ,Mice, Transgenic ,Research and Analysis Methods ,Neuroprotection ,Microbiology ,Antibodies ,Prion Proteins ,Pom1 ,03 medical and health sciences ,1311 Genetics ,Virology ,medicine ,1312 Molecular Biology ,Genetics ,Animals ,Prion protein ,Immunoassays ,Molecular Biology ,030304 developmental biology ,2403 Immunology ,Neurotoxicity ,Biology and Life Sciences ,Proteins ,RC581-607 ,medicine.disease ,Complementarity Determining Regions ,nervous system diseases ,Oligomers ,biology.protein ,2406 Virology ,Enzymology ,Immunologic Techniques ,570 Life sciences ,Parasitology ,Immunologic diseases. Allergy ,Zoology ,030217 neurology & neurosurgery ,Function (biology) - Abstract
Antibodies to the prion protein, PrP, represent a promising therapeutic approach against prion diseases but the neurotoxicity of certain anti-PrP antibodies has caused concern. Here we describe scPOM-bi, a bispecific antibody designed to function as a molecular prion tweezer. scPOM-bi combines the complementarity-determining regions of the neurotoxic antibody POM1 and the neuroprotective POM2, which bind the globular domain (GD) and flexible tail (FT) respectively. We found that scPOM-bi confers protection to prion-infected organotypic cerebellar slices even when prion pathology is already conspicuous. Moreover, scPOM-bi prevents the formation of soluble oligomers that correlate with neurotoxic PrP species. Simultaneous targeting of both GD and FT was more effective than concomitant treatment with the individual molecules or targeting the tail alone, possibly by preventing the GD from entering a toxic-prone state. We conclude that simultaneous binding of the GD and flexible tail of PrP results in strong protection from prion neurotoxicity and may represent a promising strategy for anti-prion immunotherapy., Author summary Antibody immunotherapy is considered a viable strategy against prion disease. We previously showed that antibodies against the so-called globular domain of Prion Protein (PrP) can cause PrP dependent neurotoxicity; this does not happen for antibodies against the flexible tail of PrP, which therefore ought to be preferred for therapy. Here we show that simultaneous targeting of both globular domain and flexible tail by a bispecific, combination of a toxic and a non-toxic antibody, results in stronger protection against prion toxicity, even if the bispecific is administered when prion pathology is already conspicuous. We hypothesize that neurotoxicity arises from binding to specific “toxicity triggering sites” in the globular domain. We designed our bispecific with two aims: i) occupying one such site and preventing prion or other factors from docking to it and ii) binding to the flexible tail to engage the region of PrP necessary for neurotoxicity. We also show that neurotoxic antibodies cause the formation of soluble PrP oligomers that cause toxicity on PrP expressing cell lines; these are not formed in the presence of prion protective antibodies. We suggest that these soluble species might play a role in prion toxicity, similarly to what is generally agreed to happen in other neurodegenerative disorders.
- Published
- 2018
15. Efficient In Vitro Amplification of Chronic Wasting Disease PrPRES.
- Author
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Kurt, Timothy D., Perrott, Matthew R., Wilusz, Carol J., Wilusz, Jeffrey, Supattapone, Surachai, Telling, Glenn C., Zabel, Mark D., and Hoover, Edward A.
- Subjects
- *
CHRONIC wasting disease , *PRIONS , *PROTEINS , *PROTEASE inhibitors , *GENE amplification , *BODY fluids - Abstract
Chronic wasting disease (CWD) of cervids is associated with conversion of the normal cervid prion protein, PrPC, to a protease-resistant conformer, PrPCWD. Here we report the use of both nondenaturing amplification and protein-misfolding cyclic amplification (PMCA) to amplify PrPCWDin vitro. Normal brains from deer, transgenic mice expressing cervid PrPC [Tg(cerPrP)1536 mice], and ferrets supported amplification. PMCA using normal Tg(cerPrP)1536 brains as the PrPC substrate produced >6.5 x 109-fold amplification after six rounds. Highly efficient in vitro amplification of PrPCWD is a significant step toward detection of PrPCWD in the body fluids or excreta of CWD-susceptible species. [ABSTRACT FROM AUTHOR]
- Published
- 2007
- Full Text
- View/download PDF
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