1. Serum extracellular vesicular miR-21-5p is a predictor of the prognosis in idiopathic pulmonary fibrosis
- Author
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Hiroshi Kubo, Naoya Fujino, Masakazu Ichinose, Shigeki Chiba, Hisatoshi Sugiura, Takahiro Ochiya, Chiharu Ota, Mitsuhiro Yamada, Seiichi Kobayashi, Yusuke Yoshioka, Yutaka Tojo, Masaru Yanai, Akira Koarai, Sanae Shimura, and Tomonori Makiguchi
- Subjects
Pulmonary and Respiratory Medicine ,Genetic Markers ,Male ,0301 basic medicine ,medicine.medical_specialty ,Time Factors ,Kaplan-Meier Estimate ,Biology ,Bleomycin ,Polymerase Chain Reaction ,Gastroenterology ,Extracellular Vesicles ,03 medical and health sciences ,chemistry.chemical_compound ,Idiopathic pulmonary fibrosis ,Predictive Value of Tests ,Cell Line, Tumor ,Internal medicine ,medicine ,Animals ,Humans ,Prospective Studies ,Prospective cohort study ,Survival rate ,Survival analysis ,Aged ,Oligonucleotide Array Sequence Analysis ,Proportional Hazards Models ,Aged, 80 and over ,Proportional hazards model ,Research ,Gene Expression Profiling ,Case-control study ,Prognosis ,medicine.disease ,Idiopathic Pulmonary Fibrosis ,Up-Regulation ,Mice, Inbred C57BL ,Disease Models, Animal ,MicroRNAs ,030104 developmental biology ,chemistry ,Case-Control Studies ,Predictive value of tests ,Immunology ,Female ,Cell-Free Nucleic Acids - Abstract
Background Idiopathic pulmonary fibrosis (IPF) is a disease with a poor prognosis. Although the median survival is 3 years, the clinical course varies to a large extent among IPF patients. To date, there has been no definitive prognostic marker. Extracellular vesicles (EVs) are known to hold nucleic acid, including microRNAs, and to regulate gene expression in the recipient cells. Moreover, EVs have been shown to express distinct surface proteins or enveloped microRNAs depending on the parent cell or pathological condition. We aimed to identify serum EV microRNAs that would be prognostic for IPF. Methods To determine target microRNAs in IPF, we measured serum EV microRNA expression profiles using microRNA PCR arrays in a bleomycin mouse model and validated the microRNAs in additional mice using RT-PCR. Secondly, we enrolled 41 IPF patients and conducted a 30-month prospective cohort study. Expression of serum EV miR-21-5p was normalized by dividing by the EV amount. The relative amount of EVs was measured using the ExoScreen method. We calculated the correlations between baseline serum EV miR-21-5p expression and other clinical variables. Furthermore, we determined if serum EV miR-21-5p can predict mortality during 30 months using the Cox hazard model. According to the median level, we divided the IPF patients into two groups. Then we compared the survival rate during 30 months between the two groups using the Kaplan-Meier method. Results Serum EV miR-21-5p was elevated in both the acute inflammatory phase (day 7) and the chronic fibrotic phase (day 28) in the mouse model. In the clinical setting, serum EV miR-21-5p was significantly higher in IPF patients than in healthy control subjects. The baseline serum EV miR-21-5p was correlated with the rate of decline in vital capacity over 6 months. Furthermore, serum EV miR-21-5p was independently associated with mortality during the following 30 months, even after adjustment for other variables. In the survival analysis, IPF patients whose baseline serum EV miR-21-5p was high had a significantly poorer prognosis over 30 months. Conclusions Our results suggest that serum EV miR-21-5p has potential as a prognostic biomarker for IPF. Electronic supplementary material The online version of this article (doi:10.1186/s12931-016-0427-3) contains supplementary material, which is available to authorized users.
- Published
- 2016