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• Factors driving rice straw and milk vetch mixture (MR) decomposition were studied. • Non-additive synergistic effects on biomass loss were observed in 55.6% of the sampled MR. • MR enhanced fungal abundance by 19.6–30.6% compared to a single residue. • Bacteria contributed more to residue decomposition than did fungi in paddy soils. • The increase in Peziza sp. and Reticulascus tulasneorum may drive MR decomposition. The co-incorporation of rice straw (RS) and milk vetch (MV) into paddy fields has been increasingly applied as a sustainable farming practice in southern China. Our previous study revealed the contribution of bacteria to the co-decomposition of the RS and MV mixture, although additional underlying factors driving the co-decomposition process need to be clarified. The present study further determined the succession of fungal communities and enzyme activity in the co-decomposition process of the RS and MV mixture. The results showed that non-additive synergistic effects on biomass loss were observed in 55.6% of the sampled RS and MV mixture during the co-decomposition process, stimulating mixture decomposition. Overall fungal abundance was 19.6–30.6% higher in the RS and MV mixture throughout the study than in the single residue. Fungal diversity and community structure were mainly affected by the sampling date rather than the type of residue. Specifically, mixing RS and MV significantly increased the abundance of Peziza sp. and Reticulascus tulasneorum (lignocellulose- and lignin-decomposing fungi) and exhibited higher activities of C- and N-related hydrolases than monospecific residues. Random forest (RF) models showed that bacteria contributed more to the residue decomposition and activities of C-related hydrolases, N-related hydrolases, and oxidases than fungi. However, both RF and partial least squares path models revealed that fungal abundance and community structure directly or indirectly affected the residue decomposition rate. These findings showed that mixing RS and MV could stimulate their decomposition by enhancing C-related hydrolase activity and Peziza sp. and Reticulascus tulasneorum abundance. [ABSTRACT FROM AUTHOR]

The practice of co‐incorporating rice straw and leguminous green manure (such as Chinese milk vetch) into paddy soils has become increasingly popular in the last 10 years, although its effect on soil CH4 emissions and microbial community structure is poorly understood. In this study, data from a 2‐year pot experiment were used to reveal the effects of the co‐incorporation of rice straw and Chinese milk vetch on CH4 emissions and methanogenic and methanotrophic communities in paddy soil. Five treatments were chosen: CK (unamended control), CF (inorganic fertilizer), FM (inorganic fertilizer and Chinese milk vetch, 20 g 10 kg−1 dry soil, 4.5 t ha−1), FR (inorganic fertilizer and rice straw, 20 g 10 kg−1 dry soil, 4.5 t ha−1) and FMR (inorganic fertilizer and Chinese milk vetch and rice straw mixture, 5 + 15 g 10 kg−1 dry soil, 1.125 + 2.375 t ha−1). Overall, the soil CH4 emissions in the 2 years under all residue treatments (104.4–122.8 and 83.3–133.3 g CH4 m−2) were higher than those in CK (57.0 and 20.7 g CH4 m−2) and CF (71.8 and 21.9 g CH4 m−2) treatments. The FMR treatment decreased CH4 emissions when compared with FM and FR, especially in the second year. A higher abundance of methanogens (mcrA gene copies) was found under the plant residue‐treated soils (4.35 × 108 g−1 dry soil on average) and FM increased the abundance of methanotrophs (pmoA gene copies, 2.68 × 106 g−1 dry soil). Application of plant residues changed the methanogenic and methanotrophic community structures in comparison with CF (e.g., markedly increased the populations of Methanobacteriales and Methylomonas and suppressed Methanomicrobiales and Methylobacter populations). Methane emissions were significantly and positively related to the mcrA and pmoA gene copy numbers, as well as the mcrA/pmoA ratio. The partial least squares path model (PLS‐PM) indicated that the rice plant biomass (path coefficient = 0.64), the abundance of methanogens (path coefficient = 0.57) and the community structure of methanotrophs (path coefficient = −0.59) were determinants of CH4 emissions. Among the three residue‐treated soils, FMR showed the lowest CH4 emissions and was associated with a slight decrease in the mcrA/pmoA ratio and a significant increase in the Type I/Type II methanotrophs ratio. Thus, we recommend the co‐incorporation of Chinese milk vetch and rice straw as a sustainable fertilization pattern to improve the growth of rice and minimize CH4 emissions. Highlights: Residue application improves rice productivity (except for FR), soil fertility and CH4 emissions.Co‐incorporation of MV and RS reduces CH4 emissions in comparison with pure MV or RS addition.Residue application changes the community structure of methanogens and methanotrophs.The methanogenic abundance and the methanotrophic community structure determine the CH4 emissions. [ABSTRACT FROM AUTHOR]