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Globally distributed marine taxa are well suited for investigations of biogeographic impacts on genetic diversity, connectivity, and population demography. The sea turtle genus Lepidochelys includes the wide-ranging and abundant olive ridley (L. olivacea), and the geographically restricted and 'Critically Endangered' Kemp's ridley (L. kempii). To investigate their historical biogeography, we analyzed a large dataset of mitochondrial DNA (mtDNA) sequences from olive (n = 943) and Kemp's (n = 287) ridleys, and genotyped 15 nuclear microsatellite loci in a global sample of olive ridleys (n = 285). We found that the ridley species split ~ 7.5 million years ago, before the Panama Isthmus closure. The most ancient mitochondrial olive ridley lineage, located in the Indian Ocean, was dated to ~ 2.2 Mya. Both mitochondrial and nuclear markers revealed significant structure for olive ridleys between Atlantic (ATL), East Pacific (EP), and Indo-West Pacific (IWP) areas. However, the divergence of mtDNA clades was very recent (< 1 Mya) with low within- clade diversity, supporting a recurrent extinction-recolonization model for these ocean regions. All data showed that ATL and IWP groups were more closely related than those in the EP, with mtDNA data supporting recent recolonization of the ATL from the IWP. Individual olive ridley dispersal between the ATL, EP, and IN/IWP could be interpreted as more male- than female-biased, and genetic diversity was lowest in the Atlantic Ocean. All populations showed signs of recent expansion, and estimated time frames were concordant with their recent colonization history. Investigating species abundance and distribution changes over time is central to evolutionary biology, and this study provides a historical biogeographic context for marine vertebrate conservation and management. [ABSTRACT FROM AUTHOR]

Reconstructing past events of hybridization and population size changes are required to understand speciation mechanisms and current patterns of genetic diversity, and ultimately contribute to species' conservation. Sea turtles are ancient species currently facing anthropogenic threats including climate change, fisheries, and illegal hunting. Five of the seven extant sea turtle species are known to currently hybridize, especially along the Brazilian coast where some populations can have ~32%–42% of hybrids. Although frequently observed today, it is not clear what role hybridization plays in the evolutionary diversification of this group of reptiles. In this study, we generated whole genome resequencing data of the five globally distributed sea turtle species to estimate a calibrated phylogeny and the population size dynamics, and to understand the role of hybridization in shaping the genomes of these ancient species. Our results reveal discordant species divergence dates between mitochondrial and nuclear genomes, with a high frequency of conflicting trees throughout the nuclear genome suggesting that some sea turtle species frequently hybridized in the past. The reconstruction of the species' demography showed a general decline in effective population sizes with no signs of recovery, except for the leatherback sea turtle. Furthermore, we discuss the influence of reference bias in our estimates. We show long‐lasting ancestral gene flow events within Chelonioidea that continued for millions of years after initial divergence. Speciation with gene flow is a common pattern in marine species, and it raises questions whether current hybridization events should be considered as a part of these species' evolutionary history or a conservation issue. [ABSTRACT FROM AUTHOR]

Globally, sea turtle hybridization has been reported at very low frequencies. However, in Brazil, a high incidence (>40% of morphologically assigned hawksbills) of hybridization between loggerheads and hawksbills has been reported. To the best of our knowledge, this is the first analysis of the effect of hybridization on the reproductive output of sea turtle hybrids. We used nuclear and mitochondrial markers to assign a status of hawksbill ( Eretmochelys imbricata), loggerhead ( Caretta caretta), or hybrid to 146 females that deposited 478 nests. Hybrids do not appear to be at either a reproductive advantage or disadvantage relative to their parental species based on the parameters analyzed (female curved carapace length, clutch size, emergence success, incubation period, hatchling production, observed clutch frequency, and observed breeding frequency). Although emergence success is lower in hybrids, hatchling production per clutch, as well as clutch frequency and breeding frequency, is similar among the three groups. These results show that hybrids may persist in this region. Further research on hybrid survival rates at different life stages, as well as growth rates and their ecological roles, will be fundamental to predict the fate of hybrid turtles. Sea turtle populations that overlap with other sea turtle species in space and time on nesting beaches should be screened for hybridization with the appropriate genetic markers. [ABSTRACT FROM AUTHOR]

Surprisingly, a high frequency of interspecific sea turtle hybrids has been previously recorded in a nesting site along a short stretch of the Brazilian coast. Mitochondrial DNA data indicated that as much as 43% of the females identified as Eretmochelys imbricata are hybrids in this area (Bahia State of Brazil). It is a remarkable find, because most of the nesting sites surveyed worldwide, including some in northern Brazil, presents no hybrids, and rare Caribbean sites present no more than 2% of hybrids. Thus, a detailed understanding of the hybridization process is needed to evaluate natural or anthropogenic causes of this regional phenomenon in Brazil, which could be an important factor affecting the conservation of this population. We analysed a set of 12 nuclear markers to investigate the pattern of hybridization involving three species of sea turtles: hawksbill ( E. imbricata), loggerhead ( Caretta caretta) and olive ridley ( Lepidochelys olivacea). Our data indicate that most of the individuals in the crossings L. olivacea × E. imbricata and L. olivacea × C. caretta are F1 hybrids, whereas C. caretta × E. imbricata crossings present F1 and backcrosses with both parental species. In addition, the C. caretta × E. imbricata hybridization seems to be gender and species biased, and we also found one individual with evidence of multispecies hybridization among C. caretta × E. imbricata × Chelonia mydas. The overall results also indicate that hybridization in this area is a recent phenomenon, spanning at least two generations or ∼40 years. [ABSTRACT FROM AUTHOR]

We present long-term data for hawksbill (Eretmochelys imbricata) nesting in the 2 main rookeries in Brazil: 1) northern Bahia and Sergipe, where the estimated number of nests laid each year increased from 199 in the 1991-1992 nesting season to 1345 in the 2005-2006 season and 2) Rio Grande do Norte, where the estimated number of nests laid in the 2005-2006 season was around 185-475. Adding these results, we estimate that the number of hawksbill nests laid in the 2 main Brazilian nesting grounds in 2005-2006 was between 1530 and 1820 nests. Data on the percentage of hawksbill clutches kept in situ by season in each rookery are also presented. The apparent increasing trend in hawksbill nesting in northern Brazil is encouraging and seems to reflect a range of conservation measures implemented over the past 25 years. [ABSTRACT FROM AUTHOR]

Climate change poses a unique threat to species with temperature dependent sex determination (TSD), such as marine turtles, where increases in temperature can result in extreme sex ratio biases. Knowledge of the primary sex ratio of populations with TSD is key for providing a baseline to inform management strategies and to accurately predict how future climate changes may affect turtle populations. However, there is a lack of robust data on offspring sex ratio at appropriate temporal and spatial scales to inform management decisions. To address this, we estimate the primary sex ratio of hawksbill hatchlings, Eretmochelys imbricata, from incubation duration of 5514 in situ nests from 10 nesting beaches from two regions in Brazil over the last 27 years. A strong female bias was estimated in all beaches, with 96% and 89% average female sex ratios produced in Bahia (BA) and Rio Grande do Norte (RN). Both inter-annual (BA, 88 to 99%; RN, 75 to 96% female) and inter-beach (BA, 92% to 97%; RN, 81% to 92% female) variability in mean offspring sex ratio was observed. These findings will guide management decisions in Brazil and provide further evidence of highly female-skew sex ratios in hawksbill turtles. [ABSTRACT FROM AUTHOR]