9 results on '"Saager, Rolf B."'
Search Results
2. OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system
- Author
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Applegate, Matthew B, Karrobi, Kavon, Angelo, Joseph P, Austin, Wyatt, Tabassum, Syeda M, Aguénounon, Enagnon, Tilbury, Karissa, Saager, Rolf B, Gioux, Sylvain, and Roblyer, Darren
- Subjects
Engineering ,Biomedical Engineering ,Equipment Design ,Hemoglobins ,Image Processing ,Computer-Assisted ,Optical Imaging ,Oxyhemoglobins ,Phantoms ,Imaging ,Spectrum Analysis ,diffuse optics ,frequency domain ,modulated imaging ,open source ,optical properties ,spatial frequency domain imaging ,Optical Physics ,Opthalmology and Optometry ,Optics ,Ophthalmology and optometry ,Biomedical engineering ,Atomic ,molecular and optical physics - Abstract
Significance: Spatial frequency domain imaging (SFDI) is a diffuse optical measurement technique that can quantify tissue optical absorption (μa) and reduced scattering (μs') on a pixel-by-pixel basis. Measurements of μa at different wavelengths enable the extraction of molar concentrations of tissue chromophores over a wide field, providing a noncontact and label-free means to assess tissue viability, oxygenation, microarchitecture, and molecular content. We present here openSFDI: an open-source guide for building a low-cost, small-footprint, three-wavelength SFDI system capable of quantifying μa and μs' as well as oxyhemoglobin and deoxyhemoglobin concentrations in biological tissue. The companion website provides a complete parts list along with detailed instructions for assembling the openSFDI system. Aim: We describe the design of openSFDI and report on the accuracy and precision of optical property extractions for three different systems fabricated according to the instructions on the openSFDI website. Approach: Accuracy was assessed by measuring nine tissue-simulating optical phantoms with a physiologically relevant range of μa and μs' with the openSFDI systems and a commercial SFDI device. Precision was assessed by repeatedly measuring the same phantom over 1 h. Results: The openSFDI systems had an error of 0 ± 6 % in μa and -2 ± 3 % in μs', compared to a commercial SFDI system. Bland-Altman analysis revealed the limits of agreement between the two systems to be ± 0.004 mm - 1 for μa and -0.06 to 0.1 mm - 1 for μs'. The openSFDI system had low drift with an average standard deviation of 0.0007 mm - 1 and 0.05 mm - 1 in μa and μs', respectively., Conclusion: The openSFDI provides a customizable hardware platform for research groups seeking to utilize SFDI for quantitative diffuse optical imaging.
- Published
- 2020
3. Hyperspectral imaging in the spatial frequency domain with a supercontinuum source
- Author
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Torabzadeh, Mohammad, Stockton, Patrick, Kennedy, Gordon T, Saager, Rolf B, Durkin, Anthony J, Bartels, Randy A, and Tromberg, Bruce J
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Engineering ,Biomedical Engineering ,Bioengineering ,Algorithms ,Animals ,Cattle ,Coloring Agents ,Equipment Design ,Image Processing ,Computer-Assisted ,Lasers ,Models ,Biological ,Muscle ,Skeletal ,Optical Imaging ,Phantoms ,Imaging ,tissue optical properties ,hyperspectral ,spatial frequency domain imaging ,supercontinuum laser ,Optical Physics ,Opthalmology and Optometry ,Optics ,Ophthalmology and optometry ,Biomedical engineering ,Atomic ,molecular and optical physics - Abstract
We introduce a method for quantitative hyperspectral optical imaging in the spatial frequency domain (hs-SFDI) to image tissue absorption (μa) and reduced scattering (μs') parameters over a broad spectral range. The hs-SFDI utilizes principles of spatial scanning of the spectrally dispersed output of a supercontinuum laser that is sinusoidally projected onto the tissue using a digital micromirror device. A scientific complementary metal-oxide-semiconductor camera is used for capturing images that are demodulated and analyzed using SFDI computational models. The hs-SFDI performance is validated using tissue-simulating phantoms over a range of μa and μs' values. Quantitative hs-SFDI images are obtained from an ex-vivo beef sample to spatially resolve concentrations of oxy-, deoxy-, and met-hemoglobin, as well as water and fat fractions. Our results demonstrate that the hs-SFDI can quantitatively image tissue optical properties with 1000 spectral bins in the 580- to 950-nm range over a wide, scalable field of view. With an average accuracy of 6.7% and 12.3% in μa and μs', respectively, compared to conventional methods, hs-SFDI offers a promising approach for quantitative hyperspectral tissue optical imaging.
- Published
- 2019
4. In vivo measurements of cutaneous melanin across spatial scales: using multiphoton microscopy and spatial frequency domain spectroscopy
- Author
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Saager, Rolf B, Balu, Mihaela, Crosignani, Viera, Sharif, Ata, Durkin, Anthony J, Kelly, Kristen M, and Tromberg, Bruce J
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Atomic ,Molecular and Optical Physics ,Physical Sciences ,Skin ,Humans ,Image Processing ,Computer-Assisted ,Melanins ,Microscopy ,Fluorescence ,Multiphoton ,Spectrum Analysis ,melanin ,two-photon excited fluorescence ,nonlinear optical microscopy ,tissue spectroscopy ,spatial frequency domain imaging ,optical properties ,Optical Physics ,Biomedical Engineering ,Opthalmology and Optometry ,Optics ,Ophthalmology and optometry ,Biomedical engineering ,Atomic ,molecular and optical physics - Abstract
The combined use of nonlinear optical microscopy and broadband reflectance techniques to assess melanin concentration and distribution thickness in vivo over the full range of Fitzpatrick skin types is presented. Twelve patients were measured using multiphoton microscopy (MPM) and spatial frequency domain spectroscopy (SFDS) on both dorsal forearm and volar arm, which are generally sun-exposed and non-sun-exposed areas, respectively. Both MPM and SFDS measured melanin volume fractions between (skin type I non-sun-exposed) and 20% (skin type VI sun exposed). MPM measured epidermal (anatomical) thickness values ~30-65 μm, while SFDS measured melanin distribution thickness based on diffuse optical path length. There was a strong correlation between melanin concentration and melanin distribution (epidermal) thickness measurements obtained using the two techniques. While SFDS does not have the ability to match the spatial resolution of MPM, this study demonstrates that melanin content as quantified using SFDS is linearly correlated with epidermal melanin as measured using MPM (R² = 0.8895). SFDS melanin distribution thickness is correlated to MPM values (R² = 0.8131). These techniques can be used individually and/or in combination to advance our understanding and guide therapies for pigmentation-related conditions as well as light-based treatments across a full range of skin types.
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- 2015
5. Quantitative short-wave infrared multispectral imaging of in vivo tissue optical properties
- Author
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Wilson, Robert H, Nadeau, Kyle P, Jaworski, Frank B, Rowland, Rebecca, Nguyen, John Q, Crouzet, Christian, Saager, Rolf B, Choi, Bernard, Tromberg, Bruce J, and Durkin, Anthony J
- Subjects
Physical Sciences ,Engineering ,Nanotechnology ,Algorithms ,Animals ,Burns ,Equipment Design ,Equipment Failure Analysis ,Optical Imaging ,Pilot Projects ,Rats ,Rats ,Sprague-Dawley ,Reproducibility of Results ,Sensitivity and Specificity ,Skin ,Spectroscopy ,Near-Infrared ,wide-field optical imaging ,short-wave infrared imaging ,spatial frequency domain imaging ,multispectral imaging ,optical properties ,Optical Physics ,Biomedical Engineering ,Opthalmology and Optometry ,Optics ,Ophthalmology and optometry ,Biomedical engineering ,Atomic ,molecular and optical physics - Abstract
Extending the wavelength range of spatial frequency domain imaging (SFDI) into the short-wave infrared (SWIR) has the potential to provide enhanced sensitivity to chromophores such as water and lipids that have prominent absorption features in the SWIR region. Here, we present, for the first time, a method combining SFDI with unstructured (zero spatial frequency) illumination to extract tissue absorption and scattering properties over a wavelength range (850 to 1800 nm) largely unexplored by previous tissue optics techniques. To obtain images over this wavelength range, we employ a SWIR camera in conjunction with an SFDI system. We use SFDI to obtain in vivo tissue reduced scattering coefficients at the wavelengths from 850 to 1050 nm, and then use unstructured wide-field illumination and an extrapolated power-law fit to this scattering spectrum to extract the absorption spectrum from 850 to 1800 nm. Our proof-of-principle experiment in a rat burn model illustrates that the combination of multispectral SWIR imaging, SFDI, and unstructured illumination can characterize in vivo changes in skin optical properties over a greatly expanded wavelength range. In the rat burn experiment, these changes (relative to normal, unburned skin) included increased absorption and increased scattering amplitude and slope, consistent with changes that we previously reported in the near-infrared using SFDI.
- Published
- 2014
6. Multi-frequency spatial frequency domain imaging: a depth-resolved optical scattering model to isolate scattering contrast in thin layers of skin.
- Author
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Belcastro, Luigi, Jonasson, Hanna, and Saager, Rolf B.
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LIGHT scattering ,OPTICAL images ,WOUND healing ,OPTICAL measurements ,INSPECTION & review ,OPTICAL coherence tomography ,TISSUES - Abstract
Significance: Current methods for wound healing assessment rely on visual inspection, which gives qualitative information. Optical methods allow for quantitative non-invasive measurements of optical properties relevant to wound healing. Aim: Spatial frequency domain imaging (SFDI) measures the absorption and reduced scattering coefficients of tissue. Typically, SFDI assumes homogeneous tissue; however, layered structures are present in skin. We evaluate a multifrequency approach to process SFDI data that estimates depth-specific scattering over differing penetration depths. Approach: Multi-layer phantoms were manufactured to mimic wound healing scattering contrast in depth. An SFDI device imaged these phantoms and data were processed according to our multi-frequency approach. The depth sensitive data were then compared with a two-layer scattering model based on light fluence. Results: The measured scattering from the phantoms changed with spatial frequency as our two-layer model predicted. The performance of two δ-P1 models solutions for SFDI was consistently better than the standard diffusion approximation. Conclusions: We presented an approach to process SFDI data that returns depth-resolved scattering contrast. This method allows for the implementation of layered optical models that more accurately represent physiologic parameters in thin tissue structures as in wound healing. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
7. Effects of motion on optical properties in the spatial frequency domain.
- Author
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Nguyen, John Quan, Saager, Rolf B, Cuccia, David J, Kelly, Kristen M, Jakowatz, James, Hsiang, David, and Durkin, Anthony J
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Skin ,Humans ,Skin Diseases ,Diagnostic Imaging ,Reproducibility of Results ,Phantoms ,Imaging ,Absorption ,Movement ,Algorithms ,Models ,Biological ,Image Processing ,Computer-Assisted ,Middle Aged ,Male ,spatial frequency domain imaging ,modulated imaging ,motion correction and compensation ,Phantoms ,Imaging ,Models ,Biological ,Image Processing ,Computer-Assisted ,Bioengineering ,4.1 Discovery and preclinical testing of markers and technologies ,Optics ,Optical Physics ,Opthalmology and Optometry ,Biomedical Engineering - Abstract
Spatial frequency domain imaging (SFDI) is a noncontact and wide-field optical imaging technology currently being used to study the optical properties and chromophore concentrations of in vivo skin including skin lesions of various types. Part of the challenge of developing a clinically deployable SFDI system is related to the development of effective motion compensation strategies, which in turn, is critical for recording high fidelity optical properties. Here we present a two-part strategy for SFDI motion correction. After verifying the effectiveness of the motion correction algorithm on tissue-simulating phantoms, a set of skin-imaging data was collected in order to test the performance of the correction technique under real clinical conditions. Optical properties were obtained with and without the use of the motion correction technique. The results indicate that the algorithm presented here can be used to render optical properties in moving skin surfaces with fidelities within 1.5% of an ideal stationary case and with up to 92.63% less variance. Systematic characterization of the impact of motion variables on clinical SFDI measurements reveals that until SFDI instrumentation is developed to the point of instantaneous imaging, motion compensation is necessary for the accurate localization and quantification of heterogeneities in a clinical setting.
- Published
- 2011
8. Influence of optical aberrations on depth-specific spatial frequency domain techniques.
- Author
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Majedy, Motasam, Das, Nandan K., Johansson, Johannes, and Saager, Rolf B.
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ACHROMATISM ,ABSORPTION coefficients ,OPTICAL properties ,OPTICAL aberrations ,ABSORPTION - Abstract
Spatial frequency domain imaging (SFDI) and spatial frequency domain spectroscopy (SFDS) are emerging tools to non-invasively assess tissues. However, the presence of aberrations can complicate processing and interpretation. This study develops a method to characterize optical aberrations when performing SFDI/S measurements. Additionally, we propose a post-processing method to compensate for these aberrations and recover arbitrary subsurface optical properties. Using a custom SFDS system, we extract absorption and scattering coefficients from a reference phantom at 0 to 15 mm distances from the ideal focus. In post-processing, we characterize aberrations in terms of errors in absorption and scattering relative to the expected in-focus values. We subsequently evaluate a compensation approach in multi-distance measurements of phantoms with different optical properties and in multi-layer phantom constructs to mimic subsurface targets. Characterizing depth-specific aberrations revealed a strong power law such as wavelength dependence from ∼40 to ∼10 % error in both scattering and absorption. When applying the compensation method, scattering remained within 1.3% (root-mean-square) of the ideal values, independent of depth or top layer thickness, and absorption remained within 3.8%. We have developed a protocol that allows for instrument-specific characterization and compensation for the effects of defocus and chromatic aberrations on spatial frequency domain measurements. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
9. Handheld multispectral imager for quantitative skin assessment in low-resource settings.
- Author
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Belcastro, Luigi, Jonasson, Hanna, Strömberg, Tomas, and Saager, Rolf B.
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OPTICAL measurements ,OPTICAL properties ,SIGNAL-to-noise ratio ,SKIN ,LABORATORY equipment & supplies ,MELANINS - Abstract
Significance: Spatial frequency domain imaging (SFDI) is a quantitative imaging method to measure absorption and scattering of tissue, from which several chromophore concentrations (e.g., oxy-/deoxy-/meth-hemoglobin, melanin, and carotenoids) can be calculated. Employing a method to extract additional spectral bands from RGB components (that we named cross-channels), we designed a handheld SFDI device to account for these pigments, using low-cost, consumer-grade components for its implementation and characterization. Aim: With only three broad spectral bands (red, green, blue, or RGB), consumer-grade devices are often too limited. We present a methodology to increase the number of spectral bands in SFDI devices that use RGB components without hardware modification. Approach: We developed a compact low-cost RGB spectral imager using a color CMOS camera and LED-based mini projector. The components' spectral properties were characterized and additional cross-channel bands were calculated. An alternative characterization procedure was also developed that makes use of low-cost equipment, and its results were compared. The device performance was evaluated by measurements on tissue-simulating optical phantoms and in-vivo tissue. The measurements were compared with another quantitative spectroscopy method: spatial frequency domain spectroscopy (SFDS). Results: Out of six possible cross-channel bands, two were evaluated to be suitable for our application and were fully characterized (520 ± 20 nm; 556 ± 18 nm). The other four cross-channels presented a too low signal-to-noise ratio for this implementation. In estimating the optical properties of optical phantoms, the SFDI data have a strong linear correlation with the SFDS data (R
2 = 0.987, RMSE = 0.006 for μa , R2 = 0.994, RMSE = 0.078 for μs′). Conclusions: We extracted two additional spectral bands from a commercial RGB system at no cost. There was good agreement between our device and the research-grade SFDS system. The alternative characterization procedure we have presented allowed us to measure the spectral features of the system with an accuracy comparable to standard laboratory equipment. [ABSTRACT FROM AUTHOR]- Published
- 2020
- Full Text
- View/download PDF
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