3 results on '"Tim Sainburg"'
Search Results
2. Finding, visualizing, and quantifying latent structure across diverse animal vocal repertoires
- Author
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Timothy Q. Gentner, Marvin Thielk, and Tim Sainburg
- Subjects
0301 basic medicine ,Sound Spectrography ,Databases, Factual ,Computer science ,Speech recognition ,Markov models ,Social Sciences ,Vocalization ,Songbirds ,Mice ,0302 clinical medicine ,Chiroptera ,Psychology ,Cluster Analysis ,Animal communication ,Hidden Markov models ,Biology (General) ,Hidden Markov model ,media_common ,Grammar ,Ecology ,Animal Behavior ,Physics ,Eukaryota ,Syllables ,Computational Theory and Mathematics ,Modeling and Simulation ,Physical Sciences ,Vertebrates ,Unsupervised learning ,Algorithms ,Research Article ,Bioacoustics ,QH301-705.5 ,media_common.quotation_subject ,Latent variable ,Phonology ,Birds ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,Perception ,Genetics ,Animals ,Speech ,Humans ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Behavior ,Organisms ,Biology and Life Sciences ,Computational Biology ,Linguistics ,Probability theory ,Acoustics ,Animal Communication ,030104 developmental biology ,Amniotes ,Voice ,Spectrogram ,Finches ,Vocalization, Animal ,Zoology ,030217 neurology & neurosurgery ,Mathematics ,Unsupervised Machine Learning - Abstract
Animals produce vocalizations that range in complexity from a single repeated call to hundreds of unique vocal elements patterned in sequences unfolding over hours. Characterizing complex vocalizations can require considerable effort and a deep intuition about each species’ vocal behavior. Even with a great deal of experience, human characterizations of animal communication can be affected by human perceptual biases. We present a set of computational methods for projecting animal vocalizations into low dimensional latent representational spaces that are directly learned from the spectrograms of vocal signals. We apply these methods to diverse datasets from over 20 species, including humans, bats, songbirds, mice, cetaceans, and nonhuman primates. Latent projections uncover complex features of data in visually intuitive and quantifiable ways, enabling high-powered comparative analyses of vocal acoustics. We introduce methods for analyzing vocalizations as both discrete sequences and as continuous latent variables. Each method can be used to disentangle complex spectro-temporal structure and observe long-timescale organization in communication., Author summary Of the thousands of species that communicate vocally, the repertoires of only a tiny minority have been characterized or studied in detail. This is due, in large part, to traditional analysis methods that require a high level of expertise that is hard to develop and often species-specific. Here, we present a set of unsupervised methods to project animal vocalizations into latent feature spaces to quantitatively compare and develop visual intuitions about animal vocalizations. We demonstrate these methods across a series of analyses over 19 datasets of animal vocalizations from 29 different species, including songbirds, mice, monkeys, humans, and whales. We show how learned latent feature spaces untangle complex spectro-temporal structure, enable cross-species comparisons, and uncover high-level attributes of vocalizations such as stereotypy in vocal element clusters, population regiolects, coarticulation, and individual identity.
- Published
- 2020
3. Parallels in the sequential organization of birdsong and human speech
- Author
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Marvin Thielk, Brad Theilman, Timothy Q. Gentner, and Tim Sainburg
- Subjects
0301 basic medicine ,Dynamical systems theory ,Evolution ,Science ,Speech recognition ,General Physics and Astronomy ,Markov process ,02 engineering and technology ,Article ,General Biochemistry, Genetics and Molecular Biology ,Vocalization ,03 medical and health sciences ,symbols.namesake ,Dynamical systems ,Psychology ,Animals ,Humans ,Speech ,lcsh:Science ,Parallels ,Language ,Structure (mathematical logic) ,Multidisciplinary ,biology ,Animal ,Linguistics ,General Chemistry ,Function (mathematics) ,Acoustics ,021001 nanoscience & nanotechnology ,16. Peace & justice ,biology.organism_classification ,Songbird ,Sequential organization ,030104 developmental biology ,Computer Science::Sound ,Dynamics (music) ,symbols ,lcsh:Q ,Finches ,Vocalization, Animal ,0210 nano-technology - Abstract
Human speech possesses a rich hierarchical structure that allows for meaning to be altered by words spaced far apart in time. Conversely, the sequential structure of nonhuman communication is thought to follow non-hierarchical Markovian dynamics operating over only short distances. Here, we show that human speech and birdsong share a similar sequential structure indicative of both hierarchical and Markovian organization. We analyze the sequential dynamics of song from multiple songbird species and speech from multiple languages by modeling the information content of signals as a function of the sequential distance between vocal elements. Across short sequence-distances, an exponential decay dominates the information in speech and birdsong, consistent with underlying Markovian processes. At longer sequence-distances, the decay in information follows a power law, consistent with underlying hierarchical processes. Thus, the sequential organization of acoustic elements in two learned vocal communication signals (speech and birdsong) shows functionally equivalent dynamics, governed by similar processes., By examining the organization of bird song and human speech, the authors show that the two types of communication signals have similar sequential structures, following both hierarchical and Markovian organization.
- Published
- 2019
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