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Summary: Tillering is an important parameter of plant architecture in cereal crops. In this study, we identified the PHYTOCHROME‐INTERACTING FACTOR‐LIKE (PIL) family transcription factors as new repressors of tillering in cereal crops.Using biochemical and genetic approaches, we explore the roles of TaPIL1 in regulating wheat plant architecture. We found that the PIL protein TaPIL1 controls tiller number in wheat.Overexpression of TaPIL1 reduces wheat tiller number; additionally, overexpression of TaPIL1‐SUPERMAN repression domain increases wheat tiller number. Furthermore, we show that TaPIL1 activates the transcriptional expression of wheat TEOSINTE BRANCHED1 (TaTB1); moreover, TaPIL1 physically interacts with wheat SQUAMOSA PROMOTER BINDING PROTEIN‐LIKE (TaSPL)3/17, which are activators of TaTB1 transcription. In rice, overexpression and loss‐of‐function mutations of OsPIL11 reduce or increase tiller number by regulating the expression of OsTB1. In Arabidopsis, we demonstrate that PHYTOCHROME‐INTERACTING FACTOR 4 interacts with SPL9 to inhibit shoot branching.This study reveals that PIL family transcription factors directly interact with SPLs and play an important role in repressing tillering/branching in plants. [ABSTRACT FROM AUTHOR]

Summary: The domestication gene Q is largely responsible for the widespread cultivation of wheat because it confers multiple domestication traits. However, the underlying molecular mechanisms of how Q regulates these domestication traits remain unclear.In this study, we identify a Q‐interacting protein TaLAX1, a basic helix–loop–helix transcription factor, through yeast two‐hybrid assays. Using biochemical and genetic approaches, we explore the roles of TaLAX1 in regulating wheat domestication traits.Overexpression of TaLAX1 produces phenotypes, reminiscent of the q allele; loss‐of‐function Talax1 mutations confer compact spikes, largely similar to the Q‐overexpression wheat lines. The two transcription factors TaLAX1 and Q disturb each other's activity to antagonistically regulate the expression of the lignin biosynthesis‐related gene TaKNAT7‐4D. More interestingly, a natural variation (InDel, +/− TATA), which occurs in the promoter of TaLAX1, is associated with the promoter activity difference between the D subgenome of bread wheat and its ancestor Aegilops tauschii accession T093.This study reveals that the transcription factor TaLAX1 physically interacts with Q to antagonistically regulate wheat domestication traits and a natural variation (InDel, +/− TATA) is associated with the diversification of TaLAX1 promoter activity. [ABSTRACT FROM AUTHOR]

The homeodomain-leucine zipper (HD-ZIP) family transcription factors play important roles in plant growth and development. However, the underlying mechanisms remain largely unclear. Here we found that ATHB2, encoding a HD-ZIP transcription factor, is an early auxin responsive gene. Phenotypic analyses show that overexpression of ATHB2 impairs plant architecture, including reduced plant height and small leaves, and also reduces auxin response in leaves when grown in soil. Simultaneously, the seedlings with chemical induction of ATHB2 exhibit abnormal root gravitropism, a typical auxin-related phenotype. We further show that the auxin response pattern is altered in roots of the inducible ATHB2 seedlings. Consistently, the transcript levels of some auxin biosynthetic and transport genes are significantly decreased in these transgenic seedlings. Further, protein and promoter sequence analyses in common wheat showed that the HD-ZIP II subfamily transcription factors have highly conserved motifs and most of these encoding gene promoters contain the canonical auxin-responsive elements. Expression analyses confirm that some of these HD-ZIP II genes are indeed regulated by auxin in wheat. Together, our results suggest that the HD-ZIP II subfamily transcription factors regulate plant development possibly through the auxin pathway in plants. [ABSTRACT FROM AUTHOR]

The BRASSINAZOLE‐RESISTANT 1 (BZR1) transcription factor family plays an essential role in plant brassinosteroid (BR) signaling, but the signaling mechanism through which BZR1 and its homologs cooperate with certain coactivators to facilitate transcription of target genes remains incompletely understood. In this study, we used an efficient protein interaction screening system to identify blue‐light inhibitor of cryptochromes 1 (BIC1) as a new BZR1‐interacting protein in Arabidopsis thaliana. We show that BIC1 positively regulates BR signaling and acts as a transcriptional coactivator for BZR1‐dependent activation of BR‐responsive genes. Simultaneously, BIC1 interacts with the transcription factor PIF4 to synergistically and interdependently activate expression of downstream genes including PIF4 itself, and to promote plant growth. Chromatin immunoprecipitation assays demonstrate that BIC1 and BZR1/PIF4 interdependently associate with the promoters of common target genes. In addition, we show that the interaction between BIC1 and BZR1 is evolutionally conserved in the model monocot plant Triticum aestivum (bread wheat). Together, our results reveal mechanistic details of BR signaling mediated by a transcriptional activation module BIC1/BZR1/PIF4 and thus provide new insights into the molecular mechanisms underlying the integration of BR and light signaling in plants. Synopsis: BZR1 and PIF4 are core transcription factors in brassinosteroid (BR) and light signaling, respectively. Here, Blue‐light Inhibitor of Cryptochromes 1 (BIC1) is found as a common coactivator linking BZR1 and PIF4 to synergistically and interdependently activate transcription of common target genes and promote cell elongation. BIC1 positively regulates BR responses.BIC1 interacts with BZR1 and PIF4 to synergistically co‐activate transcription of target genes, including PIF4 itself.BIC1 and BZR1/PIF4 interdependently associate with the promoters of common target genes.The interaction between BIC1 and BZR1 is evolutionally conserved in monocot and dicot plants. [ABSTRACT FROM AUTHOR]