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Control of fall armyworm (FAW) Spodoptera frugiperda (J.E. Smith) (Lepidoptera: Noctuidae) since its invasion of Africa still depends on pesticides. Early detection of adults is considered the key to the success of larvae control in the crop field. However, FAW control thresholds based on current monitoring techniques are not well established in Africa. We investigated the efficacy of moth capture frequencies and FAW incidence levels as decision tools for FAW management. Experiments were conducted over two maize cropping seasons during which FAW incidence, severity, and larvae count were recorded during destructive sampling after the application of a homologated insecticide. During the first season, the FAW incidence ranged from 37.5 ± 5.6% in the 25% incidence threshold treatment to 48.1 ± 8.1% in the control. During the second season, the incidence was significantly lower in the 25% incidence threshold treatment (55.8 ± 5.7%) compared with the control (75.7 ± 3.0%). Over the two seasons, no significant difference in FAW damage severity was recorded between the treatments and control. The highest number of larvae per plant (4.0 ± 0.6) was observed in the 10% incidence threshold treatment. Insecticide application did not consistently contribute to reducing FAW incidence and observed plant damage did not translate into yield loss. FAW control needs further investigation to establish a threshold above which damage translates into yield loss, thus necessitating control intervention. [ABSTRACT FROM AUTHOR]

Chimpanzees (Pan troglodytes) harbor rich assemblages of malaria parasites, including three species closely related to P. falciparum (sub-genus Laverania), the most malignant human malaria parasite. Here, we characterize the ecology and epidemiology of malaria infection in wild chimpanzee reservoirs. We used molecular assays to screen chimpanzee fecal samples, collected longitudinally and cross-sectionally from wild populations, for malaria parasite mitochondrial DNA. We found that chimpanzee malaria parasitism has an early age of onset and varies seasonally in prevalence. A subset of samples revealed Hepatocystis mitochondrial DNA, with phylogenetic analyses suggesting that Hepatocystis appears to cross species barriers more easily than Laverania. Longitudinal and cross-sectional sampling independently support the hypothesis that mean ambient temperature drives spatiotemporal variation in chimpanzee Laverania infection. Infection probability peaked at ~24.5 °C, consistent with the empirical transmission optimum of P. falciparum in humans. Forest cover was also positively correlated with spatial variation in Laverania prevalence, consistent with the observation that forest-dwelling Anophelines are the primary vectors. Extrapolating these relationships across equatorial Africa, we map spatiotemporal variation in the suitability of chimpanzee habitat for Laverania transmission, offering a hypothetical baseline indicator of human exposure risk. Chimpanzees are known to suffer from malaria parasitism. Here, the prevalence and epidemiology of several malaria parasites is examined in a wild chimpanzee population. [ABSTRACT FROM AUTHOR]

Preserving biodiversity under rapidly changing climate conditions is challenging. One approach for estimating impacts and their magnitude is to model current relationships between genomic and environmental data and then to forecast those relationships under future climate scenarios. In this way, understanding future genomic and environmental relationships can help guide management decisions, such as where to establish new protected areas where populations might be buffered from high temperatures or major changes in rainfall. However, climate warming is only one of many anthropogenic threats one must consider in rapidly developing parts of the world. In Central Africa, deforestation, mining, and infrastructure development are accelerating population declines of rainforest species. Here we investigate multiple anthropogenic threats in a Central African rainforest songbird, the little greenbul (Andropadus virens). We examine current climate and genomic variation in order to explore the association between genome and environment under future climate conditions. Specifically, we estimate Genomic Vulnerability, defined as the mismatch between current and predicted future genomic variation based on genotype–environment relationships modeled across contemporary populations. We do so while considering other anthropogenic impacts. We find that coastal and central Cameroon populations will require the greatest shifts in adaptive genomic variation, because both climate and land use in these areas are predicted to change dramatically. In contrast, in the more northern forest–savanna ecotones, genomic shifts required to keep pace with climate will be more moderate, and other anthropogenic impacts are expected to be comparatively low in magnitude. While an analysis of diverse taxa will be necessary for making comprehensive conservation decisions, the species‐specific results presented illustrate how evolutionary genomics and other anthropogenic threats may be mapped and used to inform mitigation efforts. To this end, we present an integrated conceptual model demonstrating how the approach for a single species can be expanded to many taxonomically diverse species. [ABSTRACT FROM AUTHOR]

Plants evolved in response to climatic conditions, which shaped their geographic distribution, functional traits and genetic composition. In the face of climatic changes, plants have to react by either genetic adaptation, phenotypic plasticity or geographic range shift. Their reaction potential depends on their phenotypic and genetic variability which can be evaluated through regional scale trait estimates, however, little is known here about tropical African plants. To start filling this gap of knowledge, the aim of this study was to estimate the phenotypic variability in a widespread perennial herb from the understorey of tropical African rainforests: Sarcophrynium prionogonium (Marantaceae). We surveyed 211 individuals from eight populations distributed across four sites in Cameroon covering largely the climatic range of the study species. Fourteen key functional traits were measured monthly for 18 months (2013–2014). Individuals of the study species persisted under a wide range of environmental conditions and there was considerable intraspecific variability within and across populations. Still, plant vegetative growth decreased with dryness. Productivity was positively related to a combination of high temperatures and precipitation and under these favourable conditions strongly shaped by light. Seasonal patterns of flower and fruit development were strongly associated with seasonal rainfall. Thus, the predicted increased dryness in tropical Africa might be disadvantageous for the study species. In the past, plants reacted to such aridification tendencies (e.g. during the Pleistocene glacial cycles) by retracting to moist refugia. The current climatic changes, however, being much faster and larger might provide new challenges. [ABSTRACT FROM AUTHOR]

Plasmodium falciparum is the most prevalent and lethal of the malaria parasites infecting humans, yet the origin and evolutionary history of this important pathogen remain controversial. Here we develop a single-genome amplification strategy to identify and characterize Plasmodium spp. DNA sequences in faecal samples from wild-living apes. Among nearly 3,000 specimens collected from field sites throughout central Africa, we found Plasmodium infection in chimpanzees (Pan troglodytes) and western gorillas (Gorilla gorilla), but not in eastern gorillas (Gorilla beringei) or bonobos (Pan paniscus). Ape plasmodial infections were highly prevalent, widely distributed and almost always made up of mixed parasite species. Analysis of more than 1,100 mitochondrial, apicoplast and nuclear gene sequences from chimpanzees and gorillas revealed that 99% grouped within one of six host-specific lineages representing distinct Plasmodium species within the subgenus Laverania. One of these from western gorillas comprised parasites that were nearly identical to P. falciparum. In phylogenetic analyses of full-length mitochondrial sequences, human P. falciparum formed a monophyletic lineage within the gorilla parasite radiation. These findings indicate that P. falciparum is of gorilla origin and not of chimpanzee, bonobo or ancient human origin. [ABSTRACT FROM AUTHOR]

Plasmodium vivax is the leading cause of human malaria in Asia and Latin America but is absent from most of central Africa due to the near fixation of a mutation that inhibits the expression of its receptor, the Duffy antigen, on human erythrocytes. The emergence of this protective allele is not understood because P. vivax is believed to have originated in Asia. Here we show, using a non-invasive approach, that wild chimpanzees and gorillas throughout central Africa are endemically infected with parasites that are closely related to human P. vivax. Sequence analyses reveal that ape parasites lack host specificity and are much more diverse than human parasites, which form a monophyletic lineage within the ape parasite radiation. These findings indicate that human P. vivax is of African origin and likely selected for the Duffy-negative mutation. All extant human P. vivax parasites are derived from a single ancestor that escaped out of Africa.

Plasmodium falciparum is the most prevalent and lethal of the malaria parasites infecting humans, yet the origin and evolutionary history of this important pathogen remain controversial. Here we develop a single-genome amplification strategy to identify and characterize Plasmodium spp. DNA sequences in faecal samples from wild-living apes. Among nearly 3,000 specimens collected from field sites throughout central Africa, we found Plasmodium infection in chimpanzees (Pan troglodytes) and western gorillas (Gorilla gorilla), but not in eastern gorillas (Gorilla beringei) or bonobos (Pan paniscus). Ape plasmodial infections were highly prevalent, widely distributed and almost always made up of mixed parasite species. Analysis of more than 1,100 mitochondrial, apicoplast and nuclear gene sequences from chimpanzees and gorillas revealed that 99% grouped within one of six host-specific lineages representing distinct Plasmodium species within the subgenus Laverania. One of these from western gorillas comprised parasites that were nearly identical to P. falciparum. In phylogenetic analyses of full-length mitochondrial sequences, human P. falciparum formed a monophyletic lineage within the gorilla parasite radiation. These findings indicate that P. falciparum is of gorilla origin and not of chimpanzee, bonobo or ancient human origin.