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Management actions against invasive species are usually most efficient during early stages of invasion. Monitoring for early detection is therefore part of many management plans. However, if monitoring efforts do not match suitable habitat areas, detecting the initial stages of an invasion may fail. We highlight this mismatch by assessing which areas have suitable habitats for an invasion of the cyanobacterium Cylindrospermopsis raciborskii in the Baltic Sea, and compare these with the areas that are currently monitored for algal blooms. Establishment of this potential toxin-producer in the Baltic Sea could have serious socio-economic consequences for tourism and recreation, as well as fisheries and aquaculture in the coastal regions. We estimate the coastal areas of the eastern Gulf of Finland as the most suitable area for establishment because of low salinity and high summer seawater surface temperatures. The species is not yet reported in the Baltic Sea, but in the suitable-habitat areas indicated by our assessment, very little monitoring is currently being done. We suggest several lines of research and monitoring to increase the probability of early detection and better predictions for the future distribution of the species. [ABSTRACT FROM AUTHOR]