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Tropical forest structural variation across heterogeneous landscapes may control above-ground carbon dynamics. We tested the hypothesis that canopy structure (leaf area and light availability) - remotely estimated from LiDAR - control variation in above-ground coarse wood production (biomass growth). Using a statistical model, these factors predicted biomass growth across tree size classes in forest near Manaus, Brazil. The same statistical model, with no parameterisation change but driven by different observed canopy structure, predicted the higher productivity of a site 500 km east. Gap fraction and a metric of vegetation vertical extent and evenness also predicted biomass gains and losses for one-hectare plots. Despite significant site differences in canopy structure and carbon dynamics, the relation between biomass growth and light fell on a unifying curve. This supported our hypothesis, suggesting that knowledge of canopy structure can explain variation in biomass growth over tropical landscapes and improve understanding of ecosystem function. [ABSTRACT FROM AUTHOR]

Abstract: Leaf area index (LAI) is a key parameter that affects the surface fluxes of energy, mass, and momentum over vegetated lands, but observational measurements are scarce, especially in remote areas with complex canopy structure. In this paper we present an indirect method to calculate the LAI based on the analyses of histograms of hemispherical photographs. The optimal threshold value (OTV), the gray-level required to separate the background (sky) and the foreground (leaves), was analytically calculated using the entropy crossover method (Sahoo, P.K., Slaaf, D.W., Albert, T.A., 1997. Threshold selection using a minimal histogram entropy difference. Optical Engineering 36(7) 1976–1981). The OTV was used to calculate the LAI using the well-known gap fraction method. This methodology was tested in two different ecosystems, including Amazon forest and pasturelands in Brazil. In general, the error between observed and calculated LAI was ∼6%. The methodology presented is suitable for the calculation of LAI since it is responsive to sky conditions, automatic, easy to implement, faster than commercially available software, and requires less data storage. [Copyright &y& Elsevier]

The Brazilian Amazon forest and cerrado savanna encompasses a region of enormous ecological, climatic, and land-use variation. Satellite remote sensing is the only tractable means to measure the biophysical attributes of vegetation throughout this region, but coarse-resolution sensors cannot resolve the details of forest structure and land-cover change deemed critical to many land-use, ecological, and conservation-oriented studies. The Carnegie Landsat Analysis System (CLAS) was developed for studies of forest and savanna structural attributes using widely available Landsat Enhanced Thematic Mapper Plus (ETM+) satellite data and advanced methods in automated spectral mixture analysis. The methodology of the CLAS approach is presented along with a study of its sensitivity to atmospheric correction errors. CLAS is then applied to a mosaic of Landsat images spanning the years 1999–2001 as a proof of concept and capability for large-scale, very high resolution mapping of the Amazon and bordering cerrado savanna. A total of 197 images were analyzed for fractional photosynthetic vegetation (PV), nonphotosynthetic vegetation (NPV), and bare substrate covers using a probabilistic spectral mixture model. Results from areas without significant land use, clouds, cloud shadows, and water bodies were compiled by the Brazilian state and vegetation class to understand the baseline structural typology of forests and savannas using this new system. Conversion of the satellite-derived PV data to woody canopy gap fraction was made to highlight major differences by vegetation and ecosystem classes. The results indicate important differences in fractional photosynthetic cover and canopy gap fraction that can now be accounted for in future studies of land-cover change, ecological variability, and biogeochemical processes across the Amazon and bordering cerrado regions of Brazil. [ABSTRACT FROM AUTHOR]