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The article presents a study which uses the natural flow regime concept to restore the assemblages of native fishes in a regulated stream in Putah Creek, California. The study employs the indicators of hydrologic alteration (IHA) model, nonmetric multidimensional scaling (NMDS) ordinations, and nonparametric multi-response permutation procedure (MRPP) to determine the efficacy of the method. Results show that the technique is effective in manipulating and managing fish assemblages in rivers.

The article focuses on the factors that affect fish assemblage in Martis Creek located in Sierra Nevada in California. It states that based on the 30 years data on fish assemblage in the stream from 1979-2008, shows decline in the density and biomass of native fishes while alien species show no long-term trend. It concludes that evaluation of fish structures is important with stream management to be different based on time series of data.

The Cosumnes River is the largest stream without a major dam on its mainstem in the Sacramento–San Joaquin drainage, central California, U.S.A. We studied its fishes over a 3-year period to answer the following questions: (1) Was the native fish fauna still present? (2) Why were alien fishes so abundant in a river system with a 'natural' flow regime, which elsewhere has been shown to favor native fishes? (3) Were there assemblages of fishes that reflected environmental differences created by the underlying geology? (4) Were there features of the watershed that consistently favored native fishes or that could be managed to favor native fishes? Of the 25 species collected, 17 were alien species; 14 species (five native) were abundant or widely distributed enough to use in detailed analyses. Of the native species, only rainbow trout, Oncorhynchus mykiss, still occupied much of its native range in headwater streams. Other native species have been extirpated or persisted mainly above barriers to alien invasions. The most widely distributed alien species was redeye bass, Micropterus coosae, previously unknown from the river, whose abundance was associated with low-numbers of native species. Other aliens were found primarily in low-land habitats on the valley floor or foothills. Canonical Correspondence Analysis indicated that both native and alien species located on environmental gradients determined largely by elevation, temperature, flow, and emergent vegetation, but the associations with these variables were not strong. While most alien fishes were found in lowland sections of river flowing through agricultural regions, the general relationships between species abundance and landscape-level variables were weak. Assemblages of fishes were poorly defined mixtures of native and alien species. The strikingly distinct geological regions of the basin no longer supported distinct fish assemblages. Species distributions were highly individualistic, reflecting dynamic patterns of introductions, invasions, and local extinctions, as well as physiological tolerances and life history patterns. Most native fishes are likely to persist in the Cosumnes River only if summer flows are increased and if populations above natural barriers are protected from further invasions by alien species, especially redeye bass. General conclusions from this study include: (1) altered habitats can support native species under some circumstances; (2) new fish assemblages with characteristics of 'natural' communities are likely to develop in invaded systems; (3) restoring flow regimes to favor native fishes may require restoring minimum summer flows as well as high channel-forming flows. However, reversing or even reducing, the impact of the predatory redeye bass, pre-adapted for California streams, is probably not possible. [ABSTRACT FROM AUTHOR]

Nutrient-diffusing substrates were used to investigate nutrient limitation of attached algal assemblages in a shaded stream and an unshaded stream in northern California. Water front both streams contained low levels of nitrogen (<14 μg · L[SUP-1] and very low N:P ratios (<2). After 31 days of colonization and growth, attached algal biomass on nitrate-diffusing substrates was significantly greater than on control substrates in the unshaded stream. Nitrate-diffusing substrates also supported larger numbers of grazing insects in the unshaded stream. The prostrate diatoms. Achnanthes lanceolata Bech. and Cocconeis placentula Ehr. displayed the most consistent positive responses to nitrate enrichment. Nutrient enrichment did not increase the accrual of algal biomass in the shaded stream, but algal biomass was significantly greater at sites located under openings in the tree canopy, implicating light as a limiting factor in this stream. Several Navicula and Nitzschia species, and one unidentified Gomphonema species, were positively associated with higher light levels in the shaded stream. Shade appears to be the primary factor limiting algal growth in small northern California streams, but when its effect is reduced by logging, the inherently low levels of nitrogen in these streams can become limiting. [ABSTRACT FROM AUTHOR]