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The article discusses research which conducted a phylogenetic analysis of complete genomes to determine the evolutionary patterns and genetic characteristics of H1N1 influenza virus outbreak in China in early 2023. The study identified the amino acid mutations of the hemagglutinin and neuraminidase genes of the viruses which are the primary causes of variation in the antigenecity and pathogenicity of the influenza virus.

Background Economically, Leuconostoc lactis is one of the most important species in the genus Leuconostoc. It plays an important role in the food industry including the production of dextrans and bacteriocins. Currently, traditional molecular typing approaches for characterisation of this species at the isolate level are either unavailable or are not sufficiently reliable for practical use. Multilocus sequence typing (MLST) is a robust and reliable method for characterising bacterial and fungal species at the molecular level. In this study, a novel MLST protocol was developed for 50 L. lactis isolates from Mongolia and China. Results Sequences from eight targeted genes (groEL, carB, recA, pheS, murC, pyrG, rpoB and uvrC) were obtained. Sequence analysis indicated 20 different sequence types (STs), with 13 of them being represented by a single isolate. Phylogenetic analysis based on the sequences of eight MLST loci indicated that the isolates belonged to two major groups, A (34 isolates) and B (16 isolates). Linkage disequilibrium analyses indicated that recombination occurred at a low frequency in L. lactis, indicating a clonal population structure. Split-decomposition analysis indicated that intraspecies recombination played a role in generating genotypic diversity amongst isolates. Conclusions Our results indicated that MLST is a valuable tool for typing L. lactis isolates that can be used for further monitoring of evolutionary changes and population genetics. [ABSTRACT FROM AUTHOR]

Based on the World Bank Investment Climate Survey, this paper investigates the openness effects on the efficiency of firms in China's manufacturing industry using a two-step data envelopment analysis (DEA) approach. In the first step, the aggregate efficiency of open firms and non-open firms is compared in each sub-industry using a group-wise heterogeneous bootstrap procedure. The results show, at a 90% confidence level, that open firms are more efficient than non-open firms in four out of five sub-industries. Furthermore, in the second step, we employ the two-stage bootstrap DEA approach to more specifically evaluate the effects of openness on the efficiency of firms. The regression results show that three openness indicators (foreign capital, import and export) have strong positive effects on firms' efficiency in China's manufacturing industry. In addition, the results also suggest that a larger state share, larger firm size, and more capital stock are negatively related to the efficiencies of firms, while a firms' learning and absorptive capacity is positively related to its efficiency. [ABSTRACT FROM AUTHOR]

One hundred and seventy-one strains of lactic acid bacteria were isolated from 44 traditional fermented milk samples from different region of Tibet. Among these samples, the concentrations of lactic acid bacteria varied from 10 5 to 10 9 colony forming unit/mL. The ratio of rod bacteria (71.3%) was higher than that of cocci (28.7%), and was considered to be the major population. Lactobacillus fermentum (31%) and Lactobacillus casei (28%) were the most predominant species among all these isolates. This study systematically analysed the microbial composition of traditional fermented milk in China, which may become a valuable source for further starter selection. [ABSTRACT FROM AUTHOR]

Xishuangbanna, situated in the northern margin of the tropical zone in Southeast Asia, maintains large areas of tropical rain forest and contains rich biodiversity. However, tropical rain forests are being rapidly destroyed in this region. This paper analyzed spatial and temporal changes of forest cover and the patterns of forests fragmentation in Xishuangbanna by comparing classified satellite images from 1976, 1988 and 2003 using GIS analyses. The patterns of fragmentation and the effects of edge width were examined using selected landscape indices. The results show that forest cover declined from 69% in 1976 to less than 50% in 2003, the number of forests fragments increased from 6,096 to 8,324, and the mean patch size declined from 217 to 115 ha. It was found that fragment size distribution was strongly skewed towards small values, and fragment size and internal habitat differ strongly among forest types: less fragmented in subtropical evergreen broadleaf forest, but severe in forests that are suitable for agriculture (such as tropical seasonal rain forest and mountain rain forest). Due to fragmentation, the edge width was smaller in 2003 than that in 1976 when the total area of edge habitat exceeded core habitat in different forest types. The core area of tropical seasonal rain forest was smallest among main forest types at any edge width. Fragmentation was severe within 12.5-km buffers around roads. The current forest cover within reserves in Xishuangbanna was comparatively large and less fragmented. However, the tropical rain forest has been degraded inside reserves. For conservation purposes, the approaches to establish forest fragments networks by corridors and stepping stone fragments are proposed. The conservation efforts should be directed first toward the conservation of remaining tropical rain forests. [ABSTRACT FROM AUTHOR]

Dairy fan is a traditional milk product made by adding ‘acid juice’ and heating up. It has been consumed by people of minority ethnic region in Yunnan Province of China for over 1,000 years. In order to improve the quality of dairy fan for further industrial-scale production, we investigated the microbial composition, especially Lactic Acid Bacteria (LAB), by conventional method and 16S rRNA sequences analysis in acid whey, which was the starter culture for traditional dairy fan making. Twenty samples of acid whey were collected from Yunnan. Ninety-one phylotypes of LAB were isolated from these samples and identified by conventional method and 16S rRNA sequencing analysis. The results showed that all isolates belonged to three genera and nine different species. Moreover, Lactobacillus helveticus was the predominant population among these samples, mesophilic and thermophilic LAB could be considered as the major microbial composition of acid whey in the Yunnan Province of China. This paper systematically studied the LAB composition of acid whey, which may be valuable for designing starter culture for dairy fan production. [ABSTRACT FROM AUTHOR]

Changing the landscape has serious environmental impacts affecting the ecosystem services, particularly in the tropics. In this paper, we report changes in ecosystem services in relation to land use and land cover over an 18-year period (1988–2006) in the Menglun Township, Xishuangbanna, Southwest China. We used Landsat TM/ETM and Quickbird data sets to estimate changes in ten land use and land cover categories, and generalized value coefficients to estimate changes in the ecosystem services provided by each land category. The results showed that over the 18-year period, the land use and land cover in the study area experienced significant changes. Rubber plantations increased from 12.10% of total land cover to 45.63%, while forested area and swidden field decreased from 48.73 and 13.14 to 27.57 and 0.46%, respectively. During this period, the estimated value of ecosystem services dropped by US $11.427 million (∼27.73%). Further analysis showed that there were significant changes in ecological functions such as nutrient cycling, erosion control, climate regulation and water treatment as well as recreation; the obvious increase in the ecological function is provision of raw material (natural rubber). Our findings conclude that an abrupt shift in land use from ecologically important tropical forests and traditionally managed swidden fields to large-scale rubber plantations result in a great loss of ecosystem services in this area. Further, the study suggests that provision of alternative economic opportunities would help in maintaining ecosystem services and for an appropriate compensation mechanisms need to be established based on rigorous valuation. [ABSTRACT FROM AUTHOR]

As the economies of developing countries grow, and the purchasing power of their inhabitants increases, the pressure on the environment and natural resources will continue to increase. In the specific case of China, impressive economic growth during the last decades exemplifies this process. Specifically, we focus on how changing economic dynamics are influencing land-use and land-cover change in Xishuangbanna, China. Xishuangbanna has the richest flora and fauna of China, but increasing demand for natural rubber and the expansion of rubber plantations is threatening this high-diversity region. We quantified land-use/land-cover change across Xishuangbanna using Landsat images from 1976, 1988, and 2003. The most obvious change was the decrease in forest cover and an increase in rubber plantations. In 1976, forests covered approximately 70% of Xishuangbanna, but by 2003 they covered less than 50%. Tropical seasonal rain forest was the forest type most affect by the expansion of rubber plantations, and a total of 139,576 ha was lost. The increase of rubber plantations below 800 m, shifted agricultural activities to higher elevations, which resulted in deforestation of mountain rain forest and subtropical evergreen broadleaf forest. Although these changes have affected the biodiversity and ecosystem services, we believe that long-term planning and monitoring can achieve a balance between economic and social needs of a growing population and the conservation of a highly diverse flora and fauna. Below 800 m , we recommend that no more rubber plantations be established, existing forest fragments should be protected, and riparian forests should be restored to connect fragments. Future rubber plantations should be established in the abandoned arable or shrublands at higher elevations, and tea or other crops should be planted in the understory to improve economic returns and reduce erosion. [ABSTRACT FROM AUTHOR]

An avian-origin human-infecting influenza (H7N9) virus was recently identified in China. We have evaluated the viral hemagglutinin (HA) receptor-binding properties of two human H7N9 isolates, A/Shanghai/1/2013 (SH-H7N9) (containing the avian-signature residue Gln226) and A/Anhui/1/2013 (AH-H7N9) (containing the mammalian-signature residue Leu226). We found that SH-H7N9 HA preferentially binds the avian receptor analog, whereas AH-H7N9 HA binds both avian and human receptor analogs. Furthermore, an AH-H7N9 mutant HA (Leu226 → Gln) was found to exhibit dual receptor-binding property, indicating that other amino acid substitutions contribute to the receptor-binding switch. The structures of SH-H7N9 HA, AH-H7N9 HA, and its mutant in complex with either avian or human receptor analogs show how AH-H7N9 can bind human receptors while still retaining the avian receptor-binding property. [ABSTRACT FROM AUTHOR]

In this paper, endotoxin contamination was determined in treated water following each unit of a drinking water treatment plant (WTP) in Beijing, China and its source water (SW) from a long water diversion channel (Shijiazhuang-Beijing) originating from four reservoirs in Hebei province, China. The total-endotoxin activities in SW ranged from 21 to 41 EU/ml at five selected cross sections of the diversion channel. The total-endotoxin in raw water of the WTP ranged from 11 to 16 EU/ml due to dilution and pretreatment during water transportation from Tuancheng Lake to the WTP, and finished water of the WTP ranged from 4 to 10 EU/ml, showing a 49% decrease following the full-scale treatment process at the WTP. Compared with the 31% removal of free-endotoxin, the WTP removed up to 71% of bound-endotoxin in raw water. The traditional treatment processes (coagulation, sedimentation and filtration) in the WTP removed substantial amounts of total-endotoxin (up to 63%), while endotoxin activities increased after granular activated carbon (GAC) adsorption and chlorination. The total-endotoxin in the actual water was composed of free-endotoxin and bound-endotoxin (endotoxin aggregates, bacteria-bound endotoxins and particle-attached endotoxins). The endotoxin aggregates, bacteria-bound endotoxins and particle-attached endotoxins co-exist as suspended particles in water, and only the bacteria-bound endotoxins were correlated with bacterial cells suspended in water. The particle distribution of endotoxin aggregates in ultrapure water was also tested and the results showed that the majority (64-89%) of endotoxin aggregates had diameters <2 μm. The endotoxin contamination and control in treated water following each unit of the WTP processes and its SW from reservoirs are discussed and compared with regard to bacterial cell counts and particle characteristics, which were dependent, to a certain extent, on different flow rates and turbulence of the water environments., (Copyright © 2013 Elsevier Ltd. All rights reserved.)