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The use of oilseed rape (OS, Brassica napus L.) as a winter green manure is crucial for enhancing soil fertility and reducing chemical N application in paddy fields. However, the impacts of replacing varying amounts of chemical N with OS on CH4 and N2O emissions in paddy soils have not been well evaluated. In this study, GHG emissions, soil properties and OS decomposition in a rice-ratooning system with different OS-urea N replacement rates (0%, 25%, 50%, 75% and 100%) were investigated. Our results indicate that 84.7–90.7% of the initial C and 97.5–98.4% of the N were released during the 192-day decomposition process, and that the mineralization patterns of net C and net N in the OS residue were consistent with a single exponential decay model. The lowest CH4 emissions (9.97 g m−2) were observed at 0% OS, while the highest N2O emissions (0.40 g m−2) were observed at this level of substitution. Conversely, the highest CH4 emissions (20.71 g m−2) and lowest N2O emissions (0.07 g m−2) were observed at 100% OS. Compared to 0% substitution, 25% substitution significantly decreased GWP and GHGI without reducing rice grain yield. Environmental parameters such as soil redox, NH4+-N and residual N and C were shown to be significantly associated with CH4 emissions, whereas soil redox, NH4+-N and residual C were the main drivers of N2O emissions. In conclusion, 25% substitution of OS was the most cost-effective measure for balancing greenhouse gas emission and rice yield. [ABSTRACT FROM AUTHOR]

Background: Citrus tristeza virus (CTV) is one of the most serious threats to the citrus industry, and is present in both wild and cultivated citrus. The origin and dispersal patterns of CTV is still poorly understood in China. Methods: In this study, 524 CTV suspected citrus samples from China were collected, including 354 cultivated citrus samples and 174 wild citrus samples. Finally, 126 CTV coat protein sequences were obtained with time-stamped from 10 citrus origins in China. Bayesian phylodynamic inference were performed for CTV origin and dispersal patterns study in China. Result: We found that CTV was mainly distributed in southern and coastal areas of China. The substitution rate of CTV was 4.70 × 10− 4 subs/site/year (95% credibility interval: 1.10 × 10− 4 subs/site/year ~ 9.10 × 10− 4 subs/site/year), with a slight increasing trend in CTV populations between 1990 and 2006. The CTV isolates in China shared a most common recent ancestor around 1875 (95% credibility interval: 1676.57 ~ 1961.02). The CTV in China was originated from wild citrus in Hunan and Jiangxi, and then spread from the wild citrus to cultivated citrus in the growing regions of Sichuan, Chongqing, Hubei, Fujian, Zhejiang, Guangxi and Guangdong provinces. Conclusions: This study has proved that CTV in China was originated from wild citrus in Hunan and Jiangxi. The spatial-temporal distribution and dispersal patterns has uncovered the population and pandemic history of CTV, providing hints toward a better understanding of the spread and origin of CTV in China. [ABSTRACT FROM AUTHOR]

The extreme diversity and complexity of angiosperms is well known. Despite the fact that parasitic plants are angiosperms, little is known about parasitic plant mitogenomic diversity, complexity, and evolution. In this study, we obtained and characterized the mitogenomes of three Cistanche species (holoparasitic plants) from China to compare the repeats, segment duplication and multi-copy protein-coding genes (PCGs), to clarify the phylogenetic and evolution relationship within the Lamiales order, and to identify the mitochondrial plastid insertions (MTPT) in Cistanche mitogenomes. The results showed that the mitogenome sizes of the three Cistanche species ranged from 1,708,661 to 3,978,341 bp. The Cistanche species genome encodes 75–126 genes, including 37–65 PCGs, 31–58 tRNA genes and 3–5 rRNA genes. Compared with other Lamiales and parasitic species, the Cistanche species showed extremely high rates of multi-copy PCGs, ranging from 0.13 to 0.58 percent of the total number of PCGs. In addition, 37–133 Simple Sequence Repeat (SSRs) were found in these three mitogenomes, the majority of which were the mononucleotides Adenine/Thymine. The interspersed repeats contained forward and palindromic repeats. Furthermore, the segment-duplication sequence size ranged from 199,584 to 2,142,551 bp, accounting for 24.9%, 11.7% and 53.9% of the Cistanche deserticola, Cistanche salsa and Cistanche tubulosa mitogenome, respectively. Furthermore, the Ka/Ks analysis suggested that the atp4, ccmB, ccmFc and matR were probably positively selected during Lamiales evolution. The Cistanche plastome suggested the presence of MTPT. Moreover, 6–12 tRNA, 9–15 PCGs fragments and 3 rRNA gene fragments in the Cistanche mitogenomes were found in the MTPT regions. This work reports the Cistanche species mitogenome for the first time, which will be invaluable for study the mitogenome evolution of Orobanchaceae family. [ABSTRACT FROM AUTHOR]

Energy structure in global terminal consumption is moving towards a direction of low carbon. This study analyzes the evolution of the share of coal in energy consumption structure by continuous dynamical systems. Based on the complex and dynamic interactions among energy sources, an n-dimensional dynamical system model is constructed where the alternative of other energy sources for coal are modeled by the linear parameters. A case study of China is performed on its terminal energy consumption structure. Three scenarios are set to analyze and compare the particular evolution paths of coal share: the substitution rate changes, the self-growth rate changes, and both the substitution rate and self-growth rate change. Results show that the improvement of renewable power in either the substitution rate or self-growth rate is the most effective to reduce the proportion of coal. As to other energy sources, raising the coal substitution rate is better than increasing their self-growth rate. It concludes that proper control of coal power, moderate development of hydropower, and active and safe development of nuclear power are likely increase the proportion of electric in terminal energy consumption. This study provides an alternative and promising approach to analyze the evolution of coal ratio in energy consumption structure and may have potential application in other areas and countries. [ABSTRACT FROM AUTHOR]

Seoul virus (SEOV), which causes hemorrhagic fever with renal syndrome (HFRS) in humans, has spread all over the world, especially in mainland China. Understanding basic mechanisms of SEOV evolution is essential to better combat and prevent viral diseases. Here, we examined SEOV prevalence and evolution in the residential area of four districts in Guangzhou city, China. The carriage of SEOV was observed in 33.33% of the sampled rodents, with 35.96% of the sampled Rattus norvegicus and 13.33% of R. tanezumi. Based on the comprehensive analyses of large (L), medium (M), and small (S) segments, our study first demonstrated that the genetic characterization of urban SEOV was shaped by high nucleotide substitution rates, purifying selection, and recombination. Additionally, we detected mutational saturation in the S segment of SEOV, which may lead to the biases of genetic divergence and substitution rates in our study. Importantly, we have filled the gap of SEOV evolution in the urban area. The genetic variation of SEOV may highlight the risk of HFRS, which merits further investigation. [ABSTRACT FROM AUTHOR]