1. The Impact of Interleukin 28b Gene Polymorphism on the Virological Response to Combined Pegylated Interferon and Ribavirin Therapy in Chronic HCV Genotype 4 Infected Egyptian Patients Using Data Mining Analysis.
- Author
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Khairy, Marwa, Fouad, Rabab, Mabrouk, Mahassen, El-Akel, Wafaa, Bakr Awad, Abu, Salama, Rabab, Elnegouly, Mayada, and Shaker, Olfat
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HEPATITIS C diagnosis , *LIVER disease diagnosis , *RIBAVIRIN , *BLOOD cell count , *BLOOD platelets , *FISHER exact test , *GENETIC polymorphisms , *HEMOGLOBINS , *HEPATITIS , *INFORMED consent (Medical law) , *INTERFERONS , *INTERLEUKINS , *LIVER function tests , *MEDICAL needs assessment , *DECISION making in clinical medicine , *DATA analysis , *BODY mass index , *CROSS-sectional method , *RECEIVER operating characteristic curves , *DESCRIPTIVE statistics - Abstract
Background: Chronic HCV represents one of the common causes of chronic liver disease worldwide with Egypt having the highest prevalence, namely genotype 4. Interleukin IL-28B gene polymorphism has been shown to relate to HCV treatment response, mainly in genotype1. Objectives: We aim to evaluate the predictive power of the rs12979860 IL28B SNP and its protein for treatment response in genotype 4 Egyptian patients by regression analysis and decision tree analysis. Patients and Methods: The study included 263 chronic HCV Egyptian patients receiving peg-interferon and ribavirin therapy. Patients were classified into 3 groups; non responders (83patients), relapsers (76patients) and sustained virological responders (104 patients). Serum IL 28 B was performed, DNA was extracted and analyzed by direct sequencing of the SNP rs 12979860 of IL28B gene. Results: CT, CC and TT represented 56 %, 25 % and 19% of the patients, respectively. Absence of C allele (TT genotype) was significantly correlated with the early failure of response while CC was associated with sustained virological response. The decision tree showed that baseline alpha fetoprotein (AFP ≤ 2.68 ng/ml) was the variable of initial split (the strongest predictor of response) confirmed by regression analysis. Patients with TT genotype had the highest probability of failure of response. Conclusions: Absence of the C allele was significantly associated with failure of response. The presence of C allele was associated with a favorable outcome. AFP is a strong baseline predictor of HCV treatment response. A decision tree model is useful for predicting the probability of response to therapy. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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