9 results on '"Bunyaviridae Infections diagnosis"'
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2. International proficiency trial demonstrates reliable Schmallenberg virus infection diagnosis in endemic and non-affected countries.
- Author
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Wernike K and Beer M
- Subjects
- Animals, Antibodies, Viral blood, Bunyaviridae Infections diagnosis, Bunyaviridae Infections immunology, Cattle, Cattle Diseases diagnosis, Cattle Diseases immunology, Cattle Diseases virology, Endemic Diseases veterinary, Enzyme-Linked Immunosorbent Assay veterinary, Europe, Genome, Viral, Laboratories, Neutralization Tests veterinary, Orthobunyavirus genetics, Orthobunyavirus immunology, Real-Time Polymerase Chain Reaction veterinary, Reproducibility of Results, Ruminants, Serologic Tests methods, Serologic Tests statistics & numerical data, Sheep, Sheep Diseases diagnosis, Sheep Diseases immunology, Sheep Diseases virology, Sheep, Domestic, Bunyaviridae Infections veterinary, Serologic Tests veterinary
- Abstract
Schmallenberg virus (SBV), an orthobunyavirus infecting ruminants, emerged in 2011 in Central Europe, spread very rapidly throughout the continent and established an endemic status, thereby representing a constant threat not only to the European livestock population, but also to neighboring countries. Hence, in endemically infected regions, the maintenance and regular verification of diagnostics is needed and in not yet affected regions, suitable diagnostic systems should be established to be prepared for a potential introduction of the disease. In addition, also for the trade of animals into free regions, highly reliable and sensitive diagnostics are of utmost importance. Therefore, a laboratory proficiency trial was initiated to allow for performance evaluations of test systems available for SBV-diagnostics, but also for evaluation of veterinary diagnostic laboratories performing those tests. Ten serum samples (six seropositive, four seronegative) were provided for serological analysis, four of the seropositive samples were provided undiluted, while the remaining samples represented 1/2 and 1/4 dilutions of one of the aforementioned samples in negative serum. Ten further sera (five virus-positive, five negative) were sent to the participants to be analyzed by SBV genome detection methods. A total of 48 diagnostic laboratories from 15 countries of three continents (Europe, Asia, North America) and three kit manufacturers participated in the SBV proficiency test, thereby generating 131 result sets, corresponding to 1310 individual results. The sample panel aimed for serological analysis was tested 72 times; the applied diagnostic methods comprised different commercial ELISAs and standard micro-neutralization tests. The sample set aimed for genome detection was analyzed in 59 approaches by various commercial or in-house (real-time) RT-PCR protocols. Antibody or genome positive samples were correctly identified in every case, independent of the applied diagnostic test system. For seronegative samples, three incorrect, false-positive test results were produced. Virus-negative samples tested false-positive in two cases. Thus, a very high diagnostic accuracy of 99.58% and 99.66% was achieved by the serological and virological methods, respectively. Hence, this ring trial demonstrated that reliable and robust SBV-diagnostics has been established in veterinary diagnostic laboratories in affected and non-affected countries., Competing Interests: Co-author Martin Beer is a PLOS ONE Editorial Board member. This does not alter the authors’ adherence to all the PLOS ONE policies on sharing data and materials.
- Published
- 2019
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3. Development and validation of a universal S-segment-based real-time RT-PCR assay for the detection of Simbu serogroup viruses.
- Author
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Golender N, Bumbarov VY, Erster O, Beer M, Khinich Y, and Wernike K
- Subjects
- Animals, Bunyaviridae Infections diagnosis, Bunyaviridae Infections virology, Cattle, Cattle Diseases diagnosis, Cattle Diseases virology, Europe, Goat Diseases diagnosis, Goat Diseases virology, Goats, Israel, Sensitivity and Specificity, Sheep, Sheep Diseases diagnosis, Sheep Diseases virology, Simbu virus genetics, Bunyaviridae Infections veterinary, Real-Time Polymerase Chain Reaction methods, Reverse Transcriptase Polymerase Chain Reaction methods, Simbu virus isolation & purification
- Abstract
Simbu serogroup viruses induce acute clinical diseases and abnormal courses of pregnancies in livestock. In Israel, two members of this serogroup, namely Akabane virus (AKAV) and Shuni virus (SHUV), were recently detected and, in Europe, Schmallenberg virus (SBV) poses a threat to ruminants. To address this emerging problem, a universal S-segment-based real-time RT-PCR assay (Uni-S) for the detection of Simbu serogroup viruses was established, which, additionally, enabled species identification of the detected viruses by subsequent sequencing. The newly developed probe-based PCR system enabled reliable detection of a comprehensive panel of Simbu viruses. Furthermore, several SBV isolates and German field samples were tested by the new Uni-S system in comparison to a SBV-specific real-time RT-PCR and both assays exhibited equally high levels of sensitivities. Finally, co-circulation of AKAV and SHUV in Israel was confirmed by analyzing field samples using the Uni-S assay followed by sequence analysis of the positive samples. To validate the test specificity, blood and tissue samples from animals negative for Simbu viruses, preparations of genetically related viruses and additional ruminant pathogens were examined and all were found to be negative. In conclusion, the new assay enabled sensitive and rapid universal molecular detection of Simbu viruses and is expected to serve as a valuable method for infection diagnosis, especially in regions where several Simbu serogroup members circulate., (Copyright © 2018 Elsevier B.V. All rights reserved.)
- Published
- 2018
- Full Text
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4. European interlaboratory comparison of Schmallenberg virus (SBV) real-time RT-PCR detection in experimental and field samples: The method of extraction is critical for SBV RNA detection in semen.
- Author
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Schulz C, van der Poel WH, Ponsart C, Cay AB, Steinbach F, Zientara S, Beer M, and Hoffmann B
- Subjects
- Animals, Bunyaviridae Infections blood, Bunyaviridae Infections diagnosis, Bunyaviridae Infections virology, Cattle, Cattle Diseases virology, Europe, RNA, Viral analysis, Real-Time Polymerase Chain Reaction, Reverse Transcriptase Polymerase Chain Reaction veterinary, Sensitivity and Specificity, Bunyaviridae Infections veterinary, Cattle Diseases diagnosis, Orthobunyavirus isolation & purification, Semen virology
- Abstract
Molecular methods for the detection of Schmallenberg virus (SBV) RNA were rapidly developed after the emergence of this novel orthobunyavirus in Europe. The SBV epizootic wave has declined, but infectious SBV in SBV RNA-positive semen remains a possible risk for the distribution of SBV. However, the abilities of SBV molecular detection methods used at European laboratories have not yet been assessed, to our knowledge. The performances of extraction and real-time reverse transcription polymerase chain reaction (RT-qPCR) methods used at 27 German and 17 other European laboratories for SBV RNA detection in the matrices of whole blood, serum, tissue homogenate, RNA eluates, and bovine semen were evaluated in 2 interlaboratory trials with special emphasis on semen extraction methods. For reliable detection of viral genome in bovine semen samples, highly effective extraction methods are essential to cope with the potential inhibitory effects of semen components on PCR results. All methods used by the 44 laboratories were sufficiently robust to detect SBV RNA with high diagnostic sensitivity (100%) and specificity (95.8%) in all matrices, except semen. The trials demonstrated that the published recommended semen extraction methods (Hoffmann et al. 2013) and a combination of TRIzol LS with an alternative extraction kit have a considerably higher diagnostic sensitivity to detect SBV RNA in semen up to a detection limit of Cq ≤35 compared to other extraction methods used. A thorough validation of extraction methods with standardized semen batches is essential before their use for SBV RNA detection in bovine semen., (© 2015 The Author(s).)
- Published
- 2015
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5. Schmallenberg virus-two years of experiences.
- Author
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Wernike K, Conraths F, Zanella G, Granzow H, Gache K, Schirrmeier H, Valas S, Staubach C, Marianneau P, Kraatz F, Höreth-Böntgen D, Reimann I, Zientara S, and Beer M
- Subjects
- Animal Diseases diagnosis, Animal Diseases prevention & control, Animal Diseases transmission, Animals, Bunyaviridae Infections diagnosis, Bunyaviridae Infections epidemiology, Bunyaviridae Infections prevention & control, Bunyaviridae Infections transmission, Ceratopogonidae virology, Congenital Abnormalities veterinary, Congenital Abnormalities virology, Europe epidemiology, Insect Vectors virology, Real-Time Polymerase Chain Reaction, Ruminants virology, Seroepidemiologic Studies, Animal Diseases epidemiology, Animal Diseases virology, Bunyaviridae Infections veterinary, Orthobunyavirus genetics, Orthobunyavirus pathogenicity
- Abstract
In autumn 2011, a novel species of the genus Orthobunyavirus of the Simbu serogroup was discovered close to the German/Dutch border and named Schmallenberg virus (SBV). Since then, SBV has caused a large epidemic in European livestock. Like other viruses of the Simbu serogroup, SBV is transmitted by insect vectors. Adult ruminants may show a mild transient disease, while an infection during a critical period of pregnancy can lead to severe congenital malformation, premature birth or stillbirth. The current knowledge about the virus, its diagnosis, the spread of the epidemic, the impact and the possibilities for preventing infections with SBV is described and discussed., (Copyright © 2014 Elsevier B.V. All rights reserved.)
- Published
- 2014
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6. Limited interlaboratory comparison of Schmallenberg virus antibody detection in serum samples.
- Author
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van der Poel WH, Cay B, Zientara S, Steinbach F, Valarcher JF, Bøtner A, Mars MH, Hakze-van der Honing R, Schirrmeier H, and Beer M
- Subjects
- Animals, Bunyaviridae Infections diagnosis, Cattle, Europe, Orthobunyavirus immunology, Sensitivity and Specificity, Sheep, Antibodies, Viral blood, Bunyaviridae Infections veterinary, Cattle Diseases diagnosis, Enzyme-Linked Immunosorbent Assay veterinary, Neutralization Tests veterinary, Orthobunyavirus isolation & purification, Sheep Diseases diagnosis
- Abstract
Eight veterinary institutes in seven different countries in Europe participated in a limited interlaboratory comparison trial to evaluate laboratory performances of Schmallenberg virus (SBV) antibody detection in serum. Seven different sheep sera and three different cattle sera were circulated, and all participating institutes were asked to test these sera using SBV antibody detection assay(s) in place in their laboratories. All laboratories within the trial performed a virus neutralisation test (VNT) as well as one or two ELISAs on all samples, and swiftly detected SBV antibodies using these assays. VNT was more sensitive in detecting SBV antibodies than several of the used ELISA assays. Based on the test results, one cattle and one sheep SBV antibody-positive serum were selected to serve as reference sera, which now can be supplied to other laboratories on request.
- Published
- 2014
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7. Epidemiology, molecular virology and diagnostics of Schmallenberg virus, an emerging orthobunyavirus in Europe.
- Author
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Doceul V, Lara E, Sailleau C, Belbis G, Richardson J, Bréard E, Viarouge C, Dominguez M, Hendrikx P, Calavas D, Desprat A, Languille J, Comtet L, Pourquier P, Eléouët JF, Delmas B, Marianneau P, Vitour D, and Zientara S
- Subjects
- Animals, Bunyaviridae Infections diagnosis, Bunyaviridae Infections epidemiology, Bunyaviridae Infections etiology, Communicable Diseases, Emerging diagnosis, Communicable Diseases, Emerging epidemiology, Communicable Diseases, Emerging etiology, Europe epidemiology, Orthobunyavirus classification, Orthobunyavirus genetics, Orthobunyavirus pathogenicity, Bunyaviridae Infections veterinary, Communicable Diseases, Emerging veterinary, Orthobunyavirus physiology, Ruminants
- Abstract
After the unexpected emergence of Bluetongue virus serotype 8 (BTV-8) in northern Europe in 2006, another arbovirus, Schmallenberg virus (SBV), emerged in Europe in 2011 causing a new economically important disease in ruminants. The virus, belonging to the Orthobunyavirus genus in the Bunyaviridae family, was first detected in Germany, in The Netherlands and in Belgium in 2011 and soon after in the United Kingdom, France, Italy, Luxembourg, Spain, Denmark and Switzerland. This review describes the current knowledge on the emergence, epidemiology, clinical signs, molecular virology and diagnosis of SBV infection.
- Published
- 2013
- Full Text
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8. Could drought conditions trigger Schmallenberg virus and other arboviruses circulation?
- Author
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Calzolari M and Albieri A
- Subjects
- Animals, Arboviruses isolation & purification, Arboviruses physiology, Bunyaviridae Infections diagnosis, Bunyaviridae Infections transmission, Cattle virology, Europe epidemiology, Goats virology, Humans, Sheep virology, Bunyaviridae Infections epidemiology, Disease Vectors, Droughts statistics & numerical data, Meteorology methods, Orthobunyavirus isolation & purification
- Abstract
Background: In 2011, a new orthobunyavirus, named the Schmallenberg virus (SBV), was discovered in Europe. Like the related Shamonda virus, SBV is an arbovirus (arthropod-borne virus). After its discovery, the virus was detected in a wide area in north-western Europe, an unexpected finding in a territory where climatic conditions would not seem ideal for arbovirus transmission. This sudden expansion suggests the effect of 2011 drought as a key factor that may have triggered SBV circulation. The possible influence of drought, recorded in north-western Europe in early 2011, on virus circulation was evaluated., Methods and Results: The locations of SBV detections in Europe until April 2012 were obtained, and area of virus circulation was evaluated by kernel density estimation. Precipitation data in SBV circulation area, summarized by the 3 month precipitation indexes of May, were compared with precipitation data outside that area, confirming driest conditions in that area., Conclusions: The onset of drought conditions recorded in the SBV detection area in early 2011 may have promoted the circulation of this virus. A correlation between circulation of some arboviruses and drought has been reported elsewhere. This was mainly explained by an effect of water deficit on the environment, which altered the relationships between vectors and reservoirs, but this correlation might be also the result of unknown effects of drought on the vectors. The effect of drought conditions on arbovirus circulation is most likely underestimated and should be considered, since it could promote expansion of arboviruses into new areas in a global warming scenario.
- Published
- 2013
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9. Validation of a commercially available indirect ELISA using a nucleocapside recombinant protein for detection of Schmallenberg virus antibodies.
- Author
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Bréard E, Lara E, Comtet L, Viarouge C, Doceul V, Desprat A, Vitour D, Pozzi N, Cay AB, De Regge N, Pourquier P, Schirrmeier H, Hoffmann B, Beer M, Sailleau C, and Zientara S
- Subjects
- Animals, Antibodies, Neutralizing immunology, Bunyaviridae Infections veterinary, Cattle, Europe, Fluorescent Antibody Technique, Indirect, Gene Expression, Neutralization Tests, Nucleocapsid Proteins genetics, Orthobunyavirus genetics, ROC Curve, Reagent Kits, Diagnostic, Recombinant Proteins genetics, Recombinant Proteins immunology, Reproducibility of Results, Sheep, Antibodies, Viral immunology, Bunyaviridae Infections diagnosis, Enzyme-Linked Immunosorbent Assay, Nucleocapsid Proteins immunology, Orthobunyavirus immunology
- Abstract
A newly developed Enzym Like Immuno Sorbant Assay (ELISA) based on the recombinant nucleocapsid protein (N) of Schmallenberg virus (SBV) was evaluated and validated for the detection of SBV-specific IgG antibodies in ruminant sera by three European Reference Laboratories. Validation data sets derived from sheep, goat and bovine sera collected in France and Germany (n = 1515) in 2011 and 2012 were categorized according to the results of a virus neutralization test (VNT) or an indirect immuno-fluorescence assay (IFA). The specificity was evaluated with 1364 sera from sheep, goat and bovine collected in France and Belgium before 2009. Overall agreement between VNT and ELISA was 98.9% and 98.3% between VNT and IFA, indicating a very good concordance between the different techniques. Although cross-reactions with other Orthobunyavirus from the Simbu serogroup viruses might occur, it is a highly sensitive, specific and robust ELISA-test validated to detect anti-SBV antibodies. This test can be applied for SBV sero-diagnostics and disease-surveillance studies in ruminant species in Europe.
- Published
- 2013
- Full Text
- View/download PDF
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