1. A genome-wide association study identifies risk loci to equine recurrent uveitis in German warmblood horses.
- Author
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Kulbrock M, Lehner S, Metzger J, Ohnesorge B, and Distl O
- Subjects
- Animals, Case-Control Studies, Germany, Linear Models, Recurrence, Risk Factors, Uveitis genetics, Genetic Loci genetics, Genetic Predisposition to Disease, Genome-Wide Association Study, Horse Diseases genetics, Horses genetics, Uveitis veterinary
- Abstract
Equine recurrent uveitis (ERU) is a common eye disease affecting up to 3-15% of the horse population. A genome-wide association study (GWAS) using the Illumina equine SNP50 bead chip was performed to identify loci conferring risk to ERU. The sample included a total of 144 German warmblood horses. A GWAS showed a significant single nucleotide polymorphism (SNP) on horse chromosome (ECA) 20 at 49.3 Mb, with IL-17A and IL-17F being the closest genes. This locus explained a fraction of 23% of the phenotypic variance for ERU. A GWAS taking into account the severity of ERU, revealed a SNP on ECA18 nearby to the crystalline gene cluster CRYGA-CRYGF. For both genomic regions on ECA18 and 20, significantly associated haplotypes containing the genome-wide significant SNPs could be demonstrated. In conclusion, our results are indicative for a genetic component regulating the possible critical role of IL-17A and IL-17F in the pathogenesis of ERU. The associated SNP on ECA18 may be indicative for cataract formation in the course of ERU.
- Published
- 2013
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