1. Search of type 2 diabetes susceptibility gene on chromosome 20q
- Author
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Takeuchi, F., Yanai, K., Inomata, H., Kuzuya, N., Kajio, H., Honjo, S., Takeda, N., Kaburagi, Y., Yasuda, K., Shirasawa, S., Sasazuki, T., and Kato, N.
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TYPE 2 diabetes , *GENETICS of disease susceptibility , *CHROMOSOMES - Abstract
Abstract: Significant evidence of linkage to type 2 diabetes (T2D) has been shown in a relatively broad region on chromosome 20q, where the hepatocyte nuclear factor-4α (HNF4A) has been noted as a positional candidate. To systematically evaluate genetic susceptibility to T2D in the relevant region, we examined the disease association by using 1145 SNPs in two-step screening in the Japanese population. The marker screening enabled us to identify significant disease association in the lipopolysaccharide binding protein (LBP) but not in the HNF4A locus. In a 17.7-Mb interval screened, the strongest association was identified for a SNP, rs2232592, located in the intron of LBP, with an estimated odds ratio of 1.73 (95% CI 1.30–2.31) (P =0.0002) in the whole study panel involving 675 case and 474 control subjects. Our data suggest that the LBP gene may confer genetic susceptibility to T2D and this warrants further replication study. [Copyright &y& Elsevier]
- Published
- 2007
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