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The mineralogy, geochemical mass balance, sulfur isotope, and micro-structure of the sandstone in the Nankan Grotto were analyzed to explore the weathering mechanisms of the subflorescence and crust patterns. The results revealed that the mineralogical compositions of the rock samples from the subflorescence and crust sites were quartz, feldspar, calcite, and clay minerals. The calcite content was much higher in the crust site than that in the subflorescence site. Based on the microscopic petrographic evidence, the crystallization stress of the thenardite and calcite and the swelling/shrinking stress of the clay minerals led to the detachment of the outer rock layer, after which subflorescence became visible on the newly exposed surface. Solution migration carried Ca2+ from the interior of the rock to the surface, where it combined with CO32− and SO42− to produce gypsum and calcite on the surface during the drying process, resulting in the formation of the crust. Therefore, the mineralogical composition (especially the calcite content) laid the foundation for the distinct development of the subflorescence and crust. In addition, the microstructure and external environment influenced the amount and location of salt crystallization, eventually leading to thenardite crystallizing within the rock in the subflorescence site while the gypsum precipitated on the surface as a crust. The sulfur isotope analysis revealed that the sulfur in the subflorescence and crust sites was most likely derived from detergents and from the combustion of oil and natural gas. Our research revealed the microscopic weathering mechanisms of the subflorescence and crust patterns in the Nankan Grotto, providing insights on salt weathering mechanisms for stone heritage sites around the world. [ABSTRACT FROM AUTHOR]