62 results on '"Catherine Juste"'
Search Results
52. Effet d'une interruption et de restitutions partielles du recyclage entéro-hépatique sur le niveau de l'excrétion biliaire chez le porc
- Author
-
Tristan Corring, Georgette Fredou, A. Van Hecke, A. Roger, Catherine Juste, and Revues Inra, Import
- Subjects
[SDV.BA] Life Sciences [q-bio]/Animal biology ,[SDV.BBM.BP] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biophysics ,General Medicine ,Biology ,Molecular biology ,[SDV.BBM.BC] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM] - Published
- 1979
53. Digestive enzymes in the germ-free animal
- Author
-
Tristan Corring, C. Simoes-Nunes, Catherine Juste, Laboratoire de physiologie de la nutrition, Institut National de la Recherche Agronomique (INRA), Revues Inra, Import, and ProdInra, Migration
- Subjects
Embryology ,medicine.medical_specialty ,[SDV]Life Sciences [q-bio] ,Lipolysis ,Guinea Pigs ,Medicine (miscellaneous) ,Biology ,Bile Acids and Salts ,Feces ,Internal medicine ,[SDV.BDD] Life Sciences [q-bio]/Development Biology ,medicine ,Animals ,Germ-Free Life ,Amylase ,Pancreas ,[SDV.BDLR] Life Sciences [q-bio]/Reproductive Biology ,chemistry.chemical_classification ,Gastric emptying ,Germ-free animal ,Hydrolysis ,Proteolytic enzymes ,Disaccharidase ,Small intestine ,Rats ,[SDV] Life Sciences [q-bio] ,[SDV.AEN] Life Sciences [q-bio]/Food and Nutrition ,Endocrinology ,Enzyme ,medicine.anatomical_structure ,Reproductive Medicine ,Biochemistry ,chemistry ,biology.protein ,Animal Science and Zoology ,Digestion ,Rabbits ,Chickens ,Digestive System ,Glycolysis ,Developmental Biology ,Food Science ,Peptide Hydrolases - Abstract
The digestive physiology of the germ-free animal has a number of characteristics (cecal hypertrophy, slower small intestine cell renewal, slower gastric emptying and intestinal transit) which distinguish it from that of the conventional animal. If the germ-free model is to be used to determine the role of gastrointestinal microflora in the nutrition of the conventional animal, it is essential to complete the study of these characteristics by data on digestive enzymes in the germ-free. The present paper analyzes these data. There is little information on salivary amylase and none on gastric proteolytic enzymes and intestinal peptidases. More complete data on exocrine pancreas enzymes and intestinal disaccharidases show that the digestive equipment is similar in germ-free and conventional animals. Bile salts, not considered as digestive enzymes, are qualitatively and quantitatively different, depending on the digestive tract bacterial environment. In general, the germ-free animal has some characteristics which should permit better utilization of the diet ingested. Measurements of apparent digestibility do not confirm this hypothesis since results obtained in germ-free and conventional animals of the same species are contradictory.
- Published
- 1981
54. Recyclage enterohepatique des acides biliaires individuels chez le porc: secretion biliaire et pool circulant
- Author
-
Robert J Henry, Véronique Legrand-Defretin, Catherine Juste, Alain Rérat, Tristan Corring, Laboratoire de physiologie de la nutrition, Institut National de la Recherche Agronomique (INRA), ProdInra, Migration, and Revues Inra, Import
- Subjects
[SDV] Life Sciences [q-bio] ,[SDV.AEN] Life Sciences [q-bio]/Food and Nutrition ,Embryology ,Reproductive Medicine ,[SDV]Life Sciences [q-bio] ,[SDV.BDD] Life Sciences [q-bio]/Development Biology ,Medicine (miscellaneous) ,Animal Science and Zoology ,sécrétion du cholédoque ,[SDV.BDLR] Life Sciences [q-bio]/Reproductive Biology ,Developmental Biology ,Food Science - Published
- 1988
55. Effet du regime lipidique sur la saturation de la bile en cholesterol chez le porc
- Author
-
Catherine Juste, Tristan Corring, Y. Demarne, ProdInra, Migration, Laboratoire de physiologie de la nutrition, Institut National de la Recherche Agronomique (INRA), Station de recherches de nutrition, and Revues Inra, Import
- Subjects
[SDV] Life Sciences [q-bio] ,[SDV.AEN] Life Sciences [q-bio]/Food and Nutrition ,Embryology ,Reproductive Medicine ,[SDV]Life Sciences [q-bio] ,[SDV.BDD] Life Sciences [q-bio]/Development Biology ,Medicine (miscellaneous) ,Animal Science and Zoology ,Biology ,[SDV.BDLR] Life Sciences [q-bio]/Reproductive Biology ,Developmental Biology ,Food Science - Published
- 1985
56. Dérivation de la bile dans l'iléon terminal chez le porc : effet sur le niveau de sécrétion des acides biliaires et sur l'utilisation digestive du régime
- Author
-
R. Levrel, Catherine Juste, Tristan Corring, G. Duchastel, J. P. Hautducoeur, and Revues Inra, Import
- Subjects
Embryology ,medicine.medical_specialty ,medicine.drug_class ,Medicine (miscellaneous) ,Ileum ,digestive system ,Internal medicine ,[SDV.BDD] Life Sciences [q-bio]/Development Biology ,medicine ,Secretion ,Enterohepatic circulation ,[SDV.BDLR] Life Sciences [q-bio]/Reproductive Biology ,Diminution ,Bile acid ,Common bile duct ,Chemistry ,digestive, oral, and skin physiology ,Small intestine ,[SDV.AEN] Life Sciences [q-bio]/Food and Nutrition ,medicine.anatomical_structure ,Endocrinology ,Reproductive Medicine ,Duodenum ,Animal Science and Zoology ,Developmental Biology ,Food Science - Abstract
Bile salt output and digestive utilization of a high-lipid diet were studied in pig bile collected from the common bile duct and infused into the duodenum then into the distal ileum of the animal. Five Large-White pigs of 50 kg body-weight were fitted with three permanent fistulae, one in the common bile duct for complete collection of bile secretion, and the other two in the duodenum and the ileum (at about 80 cm from the ileo-caecal valve) for returning the secretion to the animal. The diversion of the bile into the distal ileum led to a significant 82 p. 100 decrease in daily bile acid output and a 36 p. 100 decrease in apparent digestibility of dietary energy when compared with values obtained when bile was infused into the duodenum. The latter decrease was mainly due to a marked diminution ( - 60.4 p. 100) of the digestive utilization of the dietary lipids. The results show the role of the pig small intestine in maintaining an efficient enterohepatic circulation of bile acid as a result of optimal utilization of the dietary lipids.
- Published
- 1982
57. Effets de l'apparition de son de blé dans l'alimentation sur la sécrétion biliaire chez le porc
- Author
-
Pascale Valette, Catherine Juste, Tristan Corring, and Revues Inra, Import
- Subjects
Embryology ,[SDV.AEN] Life Sciences [q-bio]/Food and Nutrition ,Reproductive Medicine ,[SDV.BDD] Life Sciences [q-bio]/Development Biology ,Medicine (miscellaneous) ,Animal Science and Zoology ,[SDV.BDLR] Life Sciences [q-bio]/Reproductive Biology ,Developmental Biology ,Food Science - Published
- 1988
58. Recyclage entérohépatique des acides biliaires (AB) chez le porc : rôle de l'iléon et du gros intestin
- Author
-
P. Vaugelade, Alain Rérat, Catherine Juste, Tristan Corring, Véronique Legrand-Defretin, Revues Inra, Import, Laboratoire de physiologie de la nutrition, Institut National de la Recherche Agronomique (INRA), and ProdInra, Migration
- Subjects
[SDV] Life Sciences [q-bio] ,Embryology ,[SDV.AEN] Life Sciences [q-bio]/Food and Nutrition ,Reproductive Medicine ,[SDV]Life Sciences [q-bio] ,[SDV.BDD] Life Sciences [q-bio]/Development Biology ,Medicine (miscellaneous) ,Animal Science and Zoology ,[SDV.BDLR] Life Sciences [q-bio]/Reproductive Biology ,Developmental Biology ,Food Science - Published
- 1986
59. Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows
- Author
-
Tim Van Den Bossche, Bart Mesuere, Stephan Fuchs, Alexander Sczyrba, Olivier Langella, Bernhard Y. Renard, Henning Schiebenhoefer, Benoit J. Kunath, Pieter Verschaffelt, Paul Wilmes, Robert Heyer, Jean-Pierre Trezzi, Emma Leith, Pedro Queirós, Patrick May, Pratik D. Jagtap, Kathrin Trappe, Kay Schallert, Marlene Jensen, Live Heldal Hagen, Jean Armengaud, Paul E. Abraham, Magnus Ø. Arntzen, Richard J. Giannone, Guylaine Miotello, Stephanie Serena Schäpe, Thilo Muth, Robert L. Hettich, Martin von Bergen, Maximilian Wolf, Lennart Martens, Sergio Uzzau, Alessandro Tanca, Catherine Juste, Manuel Kleiner, Udo Reichl, Dirk Benndorf, Nico Jehmlich, Theresa Lehmann, Rashi Halder, Timothy J. Griffin, Olivier Pible, Céline Henry, Ariane Bassignani, Samantha L. Peters, Fonds National de la Recherche - FnR [sponsor], ERC-CoG 863664 [sponsor], Vlaams Instituut voor Biotechnologie [Ghent, Belgique] (VIB), Department of Biomolecular Medicine, Universiteit Gent = Ghent University (UGENT), Luxembourg Centre For Systems Biomedicine (LCSB), University of Luxembourg [Luxembourg], Otto-von-Guericke-Universität Magdeburg = Otto-von-Guericke University [Magdeburg] (OVGU), Helmholtz Zentrum für Umweltforschung = Helmholtz Centre for Environmental Research (UFZ), Oak Ridge National Laboratory [Oak Ridge] (ORNL), UT-Battelle, LLC, Médicaments et Technologies pour la Santé (MTS), Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Norwegian University of Life Sciences (NMBU), MICrobiologie de l'ALImentation au Service de la Santé (MICALIS), AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Anhalt University of Applied Sciences, Max Planck Institute for Dynamics of Complex Technical Systems, Max-Planck-Gesellschaft, Robert Koch Institute [Berlin] (RKI), Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, University of Minnesota [Twin Cities] (UMN), University of Minnesota System-University of Minnesota System-Department of Biochemistry, Molecular Biology and Biophysics, North Carolina State University [Raleigh] (NC State), University of North Carolina System (UNC), Génétique Quantitative et Evolution - Le Moulon (Génétique Végétale) (GQE-Le Moulon), AgroParisTech-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Vakgroep Toegepaste Wiskunde en Informatica [Gent] (Department of Applied Mathematics, Computer Science and Statistics), Hasso Plattner Institute [Potsdam, Germany], Universität Bielefeld = Bielefeld University, Università degli Studi di Sassari = University of Sassari [Sassari] (UNISS), Luxembourg Institute of Health (LIH), Federal Institute for Materials Research and Testing - Bundesanstalt für Materialforschung und -prüfung (BAM), Universiteit Gent = Ghent University [Belgium] (UGENT), Otto-von-Guericke University [Magdeburg] (OVGU), and University of Sassari
- Subjects
Proteomics ,Microbiologie [F11] [Sciences du vivant] ,PROTEOMICS DATA ,Computer science ,[SDV]Life Sciences [q-bio] ,Sample processing ,General Physics and Astronomy ,microbiome ,Peptide ,Biochemistry, biophysics & molecular biology [F05] [Life sciences] ,Workflow ,Feces ,PROTEIN INFERENCE ,Microbiology [F11] [Life sciences] ,PEPTIDE ,MICROBIAL COMMUNITIES ,Biochimie, biophysique & biologie moléculaire [F05] [Sciences du vivant] ,chemistry.chemical_classification ,0303 health sciences ,Multidisciplinary ,030302 biochemistry & molecular biology ,Mass spectronomy ,Intestines ,Critical assessment ,metaproteomics ,EXTRACTION METHODS ,Female ,Adult ,Science ,SEQUENCE DATABASE ,GENOMES ,Computational biology ,Mass spectrometry ,General Biochemistry, Genetics and Molecular Biology ,Article ,03 medical and health sciences ,proteomics ,Bacterial Proteins ,Humans ,030304 developmental biology ,IDENTIFICATION ,Bacteria ,Biology and Life Sciences ,General Chemistry ,MASS-SPECTROMETRY ,Gastrointestinal Microbiome ,chemistry ,Metaproteomics ,MULTIPLE SEARCH ENGINES ,Microbiome ,Laboratories ,Peptides - Abstract
Metaproteomics has matured into a powerful tool to assess functional interactions in microbial communities. While many metaproteomic workflows are available, the impact of method choice on results remains unclear. Here, we carry out a community-driven, multi-laboratory comparison in metaproteomics: the critical assessment of metaproteome investigation study (CAMPI). Based on well-established workflows, we evaluate the effect of sample preparation, mass spectrometry, and bioinformatic analysis using two samples: a simplified, laboratory-assembled human intestinal model and a human fecal sample. We observe that variability at the peptide level is predominantly due to sample processing workflows, with a smaller contribution of bioinformatic pipelines. These peptide-level differences largely disappear at the protein group level. While differences are observed for predicted community composition, similar functional profiles are obtained across workflows. CAMPI demonstrates the robustness of present-day metaproteomics research, serves as a template for multi-laboratory studies in metaproteomics, and provides publicly available data sets for benchmarking future developments., The authors present CAMPI, a large-scale multi-lab comparison of diverse metaproteomics workflows. CAMPI provides insights into the robustness of current methods, suggests further improvements to the field, and may pave the way for future community-driven metaproteomics projects.
- Full Text
- View/download PDF
60. Effet du son de blé sur la sécrétion biliaire chez le porc. Résultats préliminaires
- Author
-
Donna Payne, Tristan Corring, Catherine Juste, Laboratoire de physiologie de la nutrition, Institut National de la Recherche Agronomique (INRA), Revues Inra, Import, and ProdInra, Migration
- Subjects
[SDV] Life Sciences [q-bio] ,[SDV.AEN] Life Sciences [q-bio]/Food and Nutrition ,Embryology ,Reproductive Medicine ,Chemistry ,[SDV]Life Sciences [q-bio] ,[SDV.BDD] Life Sciences [q-bio]/Development Biology ,Medicine (miscellaneous) ,Animal Science and Zoology ,[SDV.BDLR] Life Sciences [q-bio]/Reproductive Biology ,Developmental Biology ,Food Science - Published
- 1986
61. Analyse métaprotéomique pour l’étude des fonctionnalités du microbiote intestinal dans de grandes cohortes
- Author
-
Bassignani, Ariane, MetaGenoPolis, Institut National de la Recherche Agronomique (INRA), Sorbonne Université, Catherine Juste, Sorbonne Universités, Catherine JUSTE, Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), and STAR, ABES
- Subjects
Métaproteomique ,Biomarqueurs ,[SDV.BIBS] Life Sciences [q-bio]/Quantitative Methods [q-bio.QM] ,Large-scale studies ,Mass spectrometry ,Réplicabilité ,Microbiote intestinal ,Gut microbiota ,Grande ampleur ,[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM] ,Spectrométrie de Masse ,Metaproteomics ,Quantification ,[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN] ,Replicability ,[SDV.BBM.GTP] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN] ,[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM] ,Biomarkers ,Métaprotéomique - Abstract
Metaproteomics focuses on identifying and quantifying proteins in complex biological samples such as the human gut microbiota. The analysis of several hundred of samples is of interest given the growing recognition of this ecosystem as a health partner. However, the methods and protocols used so far in metaproteomics are not suitable for large-scale studies. We have therefore developed algorithms, evaluated and compared several identification approaches for peptides and proteins and proposed systematic evaluation criteria, with a particular interest in the replicability of identifications, in order to develop a pre-treatment pipeline suitable for wide-ranging studies. This work bring a methodological base so far missing in the field of the metaproteomics of the human gut microbiota. Quantification of peptides and proteins by XIC has never been performed on this type of data, we have also compared normalization methods and developed a methodology for imputing missing data to refine the abundance estimations obtained by the more classical method of SC. This thesis work has highlighted microbial biomarkers of potential interest for predicting the response to a slimming diet, or to characterize various phenotypes of IBD. We have also been able to analyse the metaproteome of more than 200 patients in the framework of the ProteoCardis ANR, which is ancillary to the European project MetaCardis, and which focuses on the potential link between gut microbiota and cardiovascular diseases. The search for proteins of interest among these data should allow us to discover protective or aggravating candidate biomarkers of cardiovascular diseases., La métaprotéomique s’attache à identifier et quantifier les protéines d’échantillons biologiques complexes comme le microbiote intestinal humain. L’analyse de plusieurs centaines d’échantillons revêt un intérêt évident compte tenu de la reconnaissance croissante de cet écosystème en tant que partenaire santé. Cependant, les méthodes et protocoles utilisés jusqu’à ce jour en métaprotéomique ne sont pas adaptés à des études de grande ampleur. Nous avons développé des algorithmes, évalué et comparé plusieurs approches d’identification des peptides et protéines et proposé des critères d’évaluation systématiques, avec un intérêt particulier porté sur la réplicabilité des identifications, afin de développer un pipeline de prétraitement adapté à des études d’envergure. Ce travail apporte un socle méthodologique jusqu’ici manquant dans le domaine de la métaprotéomique du microbiote intestinal humain. Nous avons également comparé des méthodes de normalisation des XIC et développé une méthodologie d’imputation des données manquantes permettant d’affiner les estimations d’abondances obtenues par la méthode de SC. Ce travail de thèse a permis de mettre en évidence des biomarqueurs microbiens potentiellement d’intérêt pour prédire la réponse à un régime amaigrissant ou pour caractériser différents phénotypes de MICI. Nous avons également analysé le métaprotéome de plus de 200 patients dans le cadre de l’ANR ProteoCardis adossée au projet MetaCardis, et s’intéressant au lien possible entre microbiote intestinal et maladies cardiovasculaires. La recherche de protéines d’intérêt parmi ces données devrait permettre de découvrir des candidats biomarqueurs de maladies cardiovasculaires.
- Published
- 2019
62. Analyse métaprotéomique pour l’étude des fonctionnalités du microbiote intestinal dans de grandes cohortes
- Author
-
Ariane Bassignani, MetaGenoPolis, Institut National de la Recherche Agronomique (INRA), Sorbonne Université, and Catherine Juste
- Subjects
Biomarqueurs ,Large-scale studies ,Metaproteomics ,Réplicabilité ,Quantification ,Microbiote intestinal ,[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN] ,Replicability ,Gut microbiota ,Grande ampleur ,[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM] ,Biomarkers ,Métaprotéomique - Abstract
Metaproteomics focuses on identifying and quantifying proteins in complex biological samples such as the human gut microbiota. The analysis of several hundred of samples is of interest given the growing recognition of this ecosystem as a health partner. However, the methods and protocols used so far in metaproteomics are not suitable for large-scale studies. We have therefore developed algorithms, evaluated and compared several identification approaches for peptides and proteins and proposed systematic evaluation criteria, with a particular interest in the replicability of identifications, in order to develop a pre-treatment pipeline suitable for wide-ranging studies. This work bring a methodological base so far missing in the field of the metaproteomics of the human gut microbiota. Quantification of peptides and proteins by XIC has never been performed on this type of data, we have also compared normalization methods and developed a methodology for imputing missing data to refine the abundance estimations obtained by the more classical method of SC. This thesis work has highlighted microbial biomarkers of potential interest for predicting the response to a slimming diet, or to characterize various phenotypes of IBD. We have also been able to analyse the metaproteome of more than 200 patients in the framework of the ProteoCardis ANR, which is ancillary to the European project MetaCardis, and which focuses on the potential link between gut microbiota and cardiovascular diseases. The search for proteins of interest among these data should allow us to discover protective or aggravating candidate biomarkers of cardiovascular diseases.; La métaprotéomique s’attache à identifier et quantifier les protéines d’échantillons biologiques complexes comme le microbiote intestinal humain. L’analyse de plusieurs centaines d’échantillons revêt un intérêt évident compte tenu de la reconnaissance croissante de cet écosystème en tant que partenaire santé. Cependant, les méthodes et protocoles utilisés jusqu’à ce jour en métaprotéomique ne sont pas adaptés à des études de grande ampleur. Nous avons développé des algorithmes, évalué et comparé plusieurs approches d’identification des peptides et protéines et proposé des critères d’évaluation systématiques, avec un intérêt particulier porté sur la réplicabilité des identifications, afin de développer un pipeline de prétraitement adapté à des études d’envergure. Ce travail apporte un socle méthodologique jusqu’ici manquant dans le domaine de la métaprotéomique du microbiote intestinal humain. Nous avons également comparé des méthodes de normalisation des XIC et développé une méthodologie d’imputation des données manquantes permettant d’affiner les estimations d’abondances obtenues par la méthode de SC. Ce travail de thèse a permis de mettre en évidence des biomarqueurs microbiens potentiellement d’intérêt pour prédire la réponse à un régime amaigrissant ou pour caractériser différents phénotypes de MICI. Nous avons également analysé le métaprotéome de plus de 200 patients dans le cadre de l’ANR ProteoCardis adossée au projet MetaCardis, et s’intéressant au lien possible entre microbiote intestinal et maladies cardiovasculaires. La recherche de protéines d’intérêt parmi ces données devrait permettre de découvrir des candidats biomarqueurs de maladies cardiovasculaires.
- Published
- 2019
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.