51. Distribution of somatic H1 subtypes is non-random on active vs. inactive chromatin II: distribution in human adult fibroblasts.
- Author
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Parseghian MH, Newcomb RL, and Hamkalo BA
- Subjects
- Adult, Analysis of Variance, Cells, Cultured, Centromere genetics, Chromatin genetics, DNA, Satellite metabolism, DNA-Binding Proteins genetics, DNA-Binding Proteins metabolism, Fetus cytology, Fetus physiology, Fibroblasts metabolism, Gene Expression Regulation, Gene Silencing, Genes, HSP90 Heat-Shock Proteins biosynthesis, HSP90 Heat-Shock Proteins genetics, HSP90 Heat-Shock Proteins metabolism, Histones genetics, Humans, Immunoglobulin Constant Regions genetics, Immunoglobulin Constant Regions metabolism, Immunoglobulin kappa-Chains genetics, Immunoglobulin kappa-Chains metabolism, Lymphoid Enhancer-Binding Factor 1, Male, Nerve Tissue Proteins genetics, Nerve Tissue Proteins metabolism, Proto-Oncogene Proteins c-myc genetics, Proto-Oncogene Proteins c-myc metabolism, Pseudogenes, Receptor, Fibroblast Growth Factor, Type 3, Receptors, Fibroblast Growth Factor genetics, Receptors, Fibroblast Growth Factor metabolism, Repetitive Sequences, Nucleic Acid, Telomere genetics, Transcription Factors genetics, Transcription Factors metabolism, Cellular Senescence genetics, Chromatin metabolism, Fibroblasts physiology, Histones classification, Histones metabolism, Protein-Tyrosine Kinases
- Abstract
For nearly twenty years researchers have observed changes in the histone H1 subtype content of tissues as an organism develops into an adult. To better understand the consequences of such changes, immunofractionation of chromatin using previously characterized antibodies specific for human H1 subtypes was employed in the analysis of a fibroblast cell strain derived from a 37-year-old individual. DNAs isolated from immunoprecipitates were probed for the existence of a variety of DNA sequences. The results presented lend further support to a previously-proposed model (Parseghian et al. [2000] Chromosome Res 8:405-424) in which transcription of a sequence is accompanied by the selective depletion of subtypes. The data also suggest that there is more total H1 on actively transcribed sequences in these cells as compared to fetal fibroblasts and that there is less difference in the subtype compositions of active genes vs. inactive sequences in this strain. Specifically, the consequences of these changes appear to correlate with the attenuation of the heat shock response in aging fibroblasts. In a broader context, these results could explain why there are reductions in transcription in cells from mature tissue that approach senescence., (Copyright 2001 Wiley-Liss, Inc.)
- Published
- 2001
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